| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is pncB [H]
Identifier: 189025854
GI number: 189025854
Start: 686767
End: 688248
Strand: Direct
Name: pncB [H]
Synonym: TPASS_0628
Alternate gene names: 189025854
Gene position: 686767-688248 (Clockwise)
Preceding gene: 189025853
Following gene: 189025855
Centisome position: 60.27
GC content: 51.55
Gene sequence:
>1482_bases ATGAAAACGAGCGCGCTCTTTCTTGATTTTTACGAATTGACTATGGCGCAGGGATACTTTTTTCACAAGCCGCACGAGTG TGCGGTGTTTGAAGTATTCTTTCGTAAACACCCCTTCGCGGGAGGGTACTCCATTTTTGCAGGACTCGATCCGCTCCTGA CGGCAATAGAGCAGTTCCGCTTCAGTGGAGAAGATATCGATTATTTGCGCACCTTGCACTTATTTCATGATGACTTTTTG TCTTACCTTGCTTCCTTCCGCTTTTCAGGAGATATACACGCGCTAGAAGAAGGTTCAGTAATATTTCCTCACGAACCGAT CATCCGCGTGCACGCGCGCTTGGTTGAAGCACTTCTGCTTGAAGGATTGATACTCAACACCATTAATTTCCAAAGCCTCA TCGCAACAAAGACTGCACGGATGTGGCGCGCGTCAGGTGAAGGTGTTCTTATGGAGTTTGGCCTCAGAAGAGCACAGGGC TATGACGGCGCGTTGAGCGCCACACGCGCTGCTGCAATAGGTGGCGCAACAGGGACAAGCAATACACTTGCTGCAAAGCT CTACGGTATTCGGCCAATGGGAACTATGGCGCACGCGTGGGTGATGTCTTTTGACAGTGAAGAAGAGGCCTTCGAACGCT ATGCTGCACTCTATGGAAGCGCGTCCGTATTCCTCATCGATACGTACCATACCCTGGAATCAGGGATACAGAATGCAATT GCAATAGGCACACGTTTGAAGGCGGCAGGAAAATCTTTTGGGGTACGCCTGGACTCAGGAGACATGCAGTATCTTAGCGT GCAGGTGCGTGCAGCACTAGACGCAGCGGGATTGCCCGAAGCACGCATTGCAGTTTCAAATGAGCTGGATGAGACGATCA TCGAATCTTTAGTTTTAAGCGGTGCTCCCATCGATGCTTGGGGTGTAGGCACACACCTGGTAACCGGAGGAGCAGACTCT GCCTTTACCGGAGTGTACAAGATGAGTGCACGCGCTACGACACAGCCGGCGCACACTCAACACGGGCATGCAGCATCCCA ACGCCTCCCCCACTGGGACGATGCACACTGGCTGCCAGTCATGAAAGTCTCGGATAACCCGGCAAAGACTACCACACCTG GAATAAAGCAGGTATGGCGTCTGTATGATGCAGCGGGGCAATACAAGGCGGATGTTATAGGACTTGCAGATGAGGTGATA GAGCCGCAGGTGGCACAGCGATACATACATCCTTTTTATAATCTTCAATCATTCACGTTCGCAGCGCACCAGGTGGAACC GCTTTTGCGCACGGTCATGCAGGCGGGCAATCGGTTACGTGCCGGCGAATCAGTACAAGAAATCCATGCACGGATGCGCG CACAACTGCAACGATTGGATAAAAGCTATGTGCGACTGTTAAATCCACACGTTTATAAGGTTTCGCTCACGGAGCGACTT GCGCAGTTAAAGAACACGCTCATCACAGCGCTCCGCCGCTAA
Upstream 100 bases:
>100_bases GCATCATTTCTCATGTTCATGAATTGCGCACGCGCATCCCTCACAAAATTCTGATAAAAAAAACAAACGCAGGATCACAC GTAATGCAGGGGGATGCAGA
Downstream 100 bases:
>100_bases GTCAACAGATGCTGGTTATTTTGCGCGCTCCACAGCAGCACGGTGCAGGCGCGCAAAGGAGAGTGAGAAAAAAGAGCAAT GGCTTGACAGAAGTACCCGC
Product: nicotinate phosphoribosyltransferase
Products: NA
Alternate protein names: NAPRTase [H]
Number of amino acids: Translated: 493; Mature: 493
Protein sequence:
>493_residues MKTSALFLDFYELTMAQGYFFHKPHECAVFEVFFRKHPFAGGYSIFAGLDPLLTAIEQFRFSGEDIDYLRTLHLFHDDFL SYLASFRFSGDIHALEEGSVIFPHEPIIRVHARLVEALLLEGLILNTINFQSLIATKTARMWRASGEGVLMEFGLRRAQG YDGALSATRAAAIGGATGTSNTLAAKLYGIRPMGTMAHAWVMSFDSEEEAFERYAALYGSASVFLIDTYHTLESGIQNAI AIGTRLKAAGKSFGVRLDSGDMQYLSVQVRAALDAAGLPEARIAVSNELDETIIESLVLSGAPIDAWGVGTHLVTGGADS AFTGVYKMSARATTQPAHTQHGHAASQRLPHWDDAHWLPVMKVSDNPAKTTTPGIKQVWRLYDAAGQYKADVIGLADEVI EPQVAQRYIHPFYNLQSFTFAAHQVEPLLRTVMQAGNRLRAGESVQEIHARMRAQLQRLDKSYVRLLNPHVYKVSLTERL AQLKNTLITALRR
Sequences:
>Translated_493_residues MKTSALFLDFYELTMAQGYFFHKPHECAVFEVFFRKHPFAGGYSIFAGLDPLLTAIEQFRFSGEDIDYLRTLHLFHDDFL SYLASFRFSGDIHALEEGSVIFPHEPIIRVHARLVEALLLEGLILNTINFQSLIATKTARMWRASGEGVLMEFGLRRAQG YDGALSATRAAAIGGATGTSNTLAAKLYGIRPMGTMAHAWVMSFDSEEEAFERYAALYGSASVFLIDTYHTLESGIQNAI AIGTRLKAAGKSFGVRLDSGDMQYLSVQVRAALDAAGLPEARIAVSNELDETIIESLVLSGAPIDAWGVGTHLVTGGADS AFTGVYKMSARATTQPAHTQHGHAASQRLPHWDDAHWLPVMKVSDNPAKTTTPGIKQVWRLYDAAGQYKADVIGLADEVI EPQVAQRYIHPFYNLQSFTFAAHQVEPLLRTVMQAGNRLRAGESVQEIHARMRAQLQRLDKSYVRLLNPHVYKVSLTERL AQLKNTLITALRR >Mature_493_residues MKTSALFLDFYELTMAQGYFFHKPHECAVFEVFFRKHPFAGGYSIFAGLDPLLTAIEQFRFSGEDIDYLRTLHLFHDDFL SYLASFRFSGDIHALEEGSVIFPHEPIIRVHARLVEALLLEGLILNTINFQSLIATKTARMWRASGEGVLMEFGLRRAQG YDGALSATRAAAIGGATGTSNTLAAKLYGIRPMGTMAHAWVMSFDSEEEAFERYAALYGSASVFLIDTYHTLESGIQNAI AIGTRLKAAGKSFGVRLDSGDMQYLSVQVRAALDAAGLPEARIAVSNELDETIIESLVLSGAPIDAWGVGTHLVTGGADS AFTGVYKMSARATTQPAHTQHGHAASQRLPHWDDAHWLPVMKVSDNPAKTTTPGIKQVWRLYDAAGQYKADVIGLADEVI EPQVAQRYIHPFYNLQSFTFAAHQVEPLLRTVMQAGNRLRAGESVQEIHARMRAQLQRLDKSYVRLLNPHVYKVSLTERL AQLKNTLITALRR
Specific function: Catalyzes the conversion of nicotinic acid (NA) to NA mononucleotide (NaMN) [H]
COG id: COG1488
COG function: function code H; Nicotinic acid phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAPRTase family [H]
Homologues:
Organism=Homo sapiens, GI194394158, Length=543, Percent_Identity=31.6758747697974, Blast_Score=231, Evalue=8e-61, Organism=Caenorhabditis elegans, GI71997947, Length=547, Percent_Identity=33.8208409506399, Blast_Score=267, Evalue=8e-72, Organism=Caenorhabditis elegans, GI71997952, Length=547, Percent_Identity=33.8208409506399, Blast_Score=267, Evalue=8e-72, Organism=Caenorhabditis elegans, GI71997955, Length=219, Percent_Identity=45.2054794520548, Blast_Score=177, Evalue=1e-44, Organism=Drosophila melanogaster, GI24581587, Length=535, Percent_Identity=32.3364485981308, Blast_Score=236, Evalue=4e-62, Organism=Drosophila melanogaster, GI161076680, Length=206, Percent_Identity=43.2038834951456, Blast_Score=152, Evalue=6e-37, Organism=Drosophila melanogaster, GI24581595, Length=206, Percent_Identity=43.2038834951456, Blast_Score=152, Evalue=6e-37, Organism=Drosophila melanogaster, GI28574709, Length=206, Percent_Identity=43.2038834951456, Blast_Score=152, Evalue=6e-37, Organism=Drosophila melanogaster, GI24581593, Length=206, Percent_Identity=43.2038834951456, Blast_Score=152, Evalue=6e-37, Organism=Drosophila melanogaster, GI24581591, Length=206, Percent_Identity=43.2038834951456, Blast_Score=152, Evalue=6e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015977 - InterPro: IPR007229 - InterPro: IPR006405 - InterPro: IPR002638 [H]
Pfam domain/function: PF04095 NAPRTase [H]
EC number: =2.4.2.11 [H]
Molecular weight: Translated: 54579; Mature: 54579
Theoretical pI: Translated: 7.10; Mature: 7.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTSALFLDFYELTMAQGYFFHKPHECAVFEVFFRKHPFAGGYSIFAGLDPLLTAIEQFR CCCCHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHCCCCCCHHHHHCHHHHHHHHHHHH FSGEDIDYLRTLHLFHDDFLSYLASFRFSGDIHALEEGSVIFPHEPIIRVHARLVEALLL CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEECCCCHHHHHHHHHHHHHHH EGLILNTINFQSLIATKTARMWRASGEGVLMEFGLRRAQGYDGALSATRAAAIGGATGTS HHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCC NTLAAKLYGIRPMGTMAHAWVMSFDSEEEAFERYAALYGSASVFLIDTYHTLESGIQNAI CCCEEHEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHH AIGTRLKAAGKSFGVRLDSGDMQYLSVQVRAALDAAGLPEARIAVSNELDETIIESLVLS HHHHHHHHCCCCCCEEECCCCCEEEEEEHHHHHCCCCCCHHHEEHHHHHHHHHHHHHHHC GAPIDAWGVGTHLVTGGADSAFTGVYKMSARATTQPAHTQHGHAASQRLPHWDDAHWLPV CCCCCCCCCCCEEEECCCCCHHHHHHEECCCCCCCCCCCCCCCHHHHCCCCCCCCCCEEE MKVSDNPAKTTTPGIKQVWRLYDAAGQYKADVIGLADEVIEPQVAQRYIHPFYNLQSFTF EEECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHH AAHQVEPLLRTVMQAGNRLRAGESVQEIHARMRAQLQRLDKSYVRLLNPHVYKVSLTERL HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHH AQLKNTLITALRR HHHHHHHHHHHCC >Mature Secondary Structure MKTSALFLDFYELTMAQGYFFHKPHECAVFEVFFRKHPFAGGYSIFAGLDPLLTAIEQFR CCCCHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHCCCCCCHHHHHCHHHHHHHHHHHH FSGEDIDYLRTLHLFHDDFLSYLASFRFSGDIHALEEGSVIFPHEPIIRVHARLVEALLL CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEECCCCHHHHHHHHHHHHHHH EGLILNTINFQSLIATKTARMWRASGEGVLMEFGLRRAQGYDGALSATRAAAIGGATGTS HHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCC NTLAAKLYGIRPMGTMAHAWVMSFDSEEEAFERYAALYGSASVFLIDTYHTLESGIQNAI CCCEEHEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHH AIGTRLKAAGKSFGVRLDSGDMQYLSVQVRAALDAAGLPEARIAVSNELDETIIESLVLS HHHHHHHHCCCCCCEEECCCCCEEEEEEHHHHHCCCCCCHHHEEHHHHHHHHHHHHHHHC GAPIDAWGVGTHLVTGGADSAFTGVYKMSARATTQPAHTQHGHAASQRLPHWDDAHWLPV CCCCCCCCCCCEEEECCCCCHHHHHHEECCCCCCCCCCCCCCCHHHHCCCCCCCCCCEEE MKVSDNPAKTTTPGIKQVWRLYDAAGQYKADVIGLADEVIEPQVAQRYIHPFYNLQSFTF EEECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHH AAHQVEPLLRTVMQAGNRLRAGESVQEIHARMRAQLQRLDKSYVRLLNPHVYKVSLTERL HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHH AQLKNTLITALRR HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]