Click here to switch to the map view.

The map label for this gene is 189025843

Identifier: 189025843

GI number: 189025843

Start: 670914

End: 671192

Strand: Reverse

Name: 189025843

Synonym: TPASS_0617

Alternate gene names: NA

Gene position: 671192-670914 (Counterclockwise)

Preceding gene: 189025844

Following gene: 189025834

Centisome position: 58.9

GC content: 59.14

Gene sequence:

>279_bases
GTGTGTTCGTTCGAACATGGAGGGTGGTACGTTCCAAAGACAGTGCTGAGCCTGCTGAGGCGCCGGAAGTGTCAGGATGC
TAGGGCTGAGTCTGAGGAATTGGGCATCACGGGGATTTGCCAGAACTACGCGGTGCCGGTGCAGCTGGGGGTGCAGCACT
ACTTTGGCGCGCATTGGGGGATAGATGCGACGGCTACCGTTTCGTTTGGCGTTGACACCAAGCTGGCTAAGTTCCGCATC
CCGTATACGTTGCGCGTTGGCCCGGTCTTCCGCACCTGA

Upstream 100 bases:

>100_bases
GGTAAATACGTATCTGTCGGTAGCGGCGGGTTTTGAGTGCACTGCGCTCATCTACGACAGCTACCATTACATCACCATCC
AGGCCCCCAATGAGGGTTCG

Downstream 100 bases:

>100_bases
GCGGGTGCGCGCTCAGCGTGCCCCGTTTAGAAGGAGGCCGAGCGCTCCTCTACCGAACCGTCTGCGTGCGCAACAAAGAC
GCGTACGGTTCGCTCGGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MCSFEHGGWYVPKTVLSLLRRRKCQDARAESEELGITGICQNYAVPVQLGVQHYFGAHWGIDATATVSFGVDTKLAKFRI
PYTLRVGPVFRT

Sequences:

>Translated_92_residues
MCSFEHGGWYVPKTVLSLLRRRKCQDARAESEELGITGICQNYAVPVQLGVQHYFGAHWGIDATATVSFGVDTKLAKFRI
PYTLRVGPVFRT
>Mature_92_residues
MCSFEHGGWYVPKTVLSLLRRRKCQDARAESEELGITGICQNYAVPVQLGVQHYFGAHWGIDATATVSFGVDTKLAKFRI
PYTLRVGPVFRT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y617_TREPA (O83626)

Other databases:

- EMBL:   AE000520
- PIR:   F71303
- RefSeq:   NP_219055.1
- ProteinModelPortal:   O83626
- IntAct:   O83626
- GeneID:   2611223
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0617
- NMPDR:   fig|243276.1.peg.614
- TIGR:   TP_0617
- HOGENOM:   HBG732066
- ProtClustDB:   CLSK382638
- BioCyc:   TPAL243276:TP_0617-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10318; Mature: 10318

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCSFEHGGWYVPKTVLSLLRRRKCQDARAESEELGITGICQNYAVPVQLGVQHYFGAHWG
CCCCCCCCEECHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCEEEECHHHHCCCCCC
IDATATVSFGVDTKLAKFRIPYTLRVGPVFRT
CCCEEEEEECCCCCEEEEECCEEEEECCEECC
>Mature Secondary Structure
MCSFEHGGWYVPKTVLSLLRRRKCQDARAESEELGITGICQNYAVPVQLGVQHYFGAHWG
CCCCCCCCEECHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCEEEECHHHHCCCCCC
IDATATVSFGVDTKLAKFRIPYTLRVGPVFRT
CCCEEEEEECCCCCEEEEECCEEEEECCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876