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The map label for this gene is sufC [C]

Identifier: 189025837

GI number: 189025837

Start: 664923

End: 665702

Strand: Direct

Name: sufC [C]

Synonym: TPASS_0611

Alternate gene names: 189025837

Gene position: 664923-665702 (Clockwise)

Preceding gene: 189025836

Following gene: 189025838

Centisome position: 58.35

GC content: 54.74

Gene sequence:

>780_bases
ATGCCCACACTCCTCGATATCCGCGACCTGTGTATGTCCATTGCGGATAGGCCCATCCTCAAAAGTCTCAACCTAACCCT
GAATACCGGCGAGGTGCACGCCGTCATGGGACCGAACGGTGCAGGCAAGTCCACTCTTGCAGGCACCATCGTGGGAAATC
CCCACTGCACTATCGAACGTGGGGAAATTTATTTTCAAGGGCAGTGTATCAACGACGTGCCTGTGTACGAGCGCGCTCGG
CGGGGTATTTTTCTCTCGTTCCAAACTCCTGAGGAAGTCCCCGGTCTTTCGGTCGAGGAGTTTCTCCGCGCGGCAAAAGA
GGCGGTTCTTGGTACTAAAGTTTCCGTGCTCGACTTTCACACGCAGTTGCGTGCGAAGCTTGCTCGCTTGCGCATCAGTG
AGGCGTACGCCTCGCGCGGCCTGAATGTAGGATTCTCTGGGGGAGAGAAAAAAAAGAACGAAATACTTCAGCTCGCTGTT
CTTGAGCCCAAACTGGCCATACTTGACGAGACGGATTCAGGACTTGATGTTGACGCTACGCGCATTGTCTTCGAGGGCAT
TGACGATATCCGTACGCCCGATATGGGATTCCTGATCATCACCCATCACCGAGAAGTTCTCGAGTACATTAAGCCTGACG
TGGTGCACATCCTCGTCGACGGTACCATCGTGAAGACCGGTGACGTGAGTTTGGTGCACTACGTGGTTGAACACGGTTAC
GCTGACTTTGCCACGCCCCGTGCAGGCGAACAAGGAGGCACGCCCGTTTCTCCGGAATAG

Upstream 100 bases:

>100_bases
GTATGTGTTTCCTGTGCAGGATGCGTGGTCTCTTTCCCTTGCAACATACATTCGAATGTACGTATACTCCTGCTCAGTTT
ACTCCTTGCAGGAGCCGCTC

Downstream 100 bases:

>100_bases
AAAAAGTAAGTTATCCTTTTGTGGAGGCGCGCTGCCCCCACGCCAGCAGACCGCATATCCACCGCTTAGAGGAAGCGCGT
ATGAATACACAGCAACAGAG

Product: ABC transporter, ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MPTLLDIRDLCMSIADRPILKSLNLTLNTGEVHAVMGPNGAGKSTLAGTIVGNPHCTIERGEIYFQGQCINDVPVYERAR
RGIFLSFQTPEEVPGLSVEEFLRAAKEAVLGTKVSVLDFHTQLRAKLARLRISEAYASRGLNVGFSGGEKKKNEILQLAV
LEPKLAILDETDSGLDVDATRIVFEGIDDIRTPDMGFLIITHHREVLEYIKPDVVHILVDGTIVKTGDVSLVHYVVEHGY
ADFATPRAGEQGGTPVSPE

Sequences:

>Translated_259_residues
MPTLLDIRDLCMSIADRPILKSLNLTLNTGEVHAVMGPNGAGKSTLAGTIVGNPHCTIERGEIYFQGQCINDVPVYERAR
RGIFLSFQTPEEVPGLSVEEFLRAAKEAVLGTKVSVLDFHTQLRAKLARLRISEAYASRGLNVGFSGGEKKKNEILQLAV
LEPKLAILDETDSGLDVDATRIVFEGIDDIRTPDMGFLIITHHREVLEYIKPDVVHILVDGTIVKTGDVSLVHYVVEHGY
ADFATPRAGEQGGTPVSPE
>Mature_258_residues
PTLLDIRDLCMSIADRPILKSLNLTLNTGEVHAVMGPNGAGKSTLAGTIVGNPHCTIERGEIYFQGQCINDVPVYERARR
GIFLSFQTPEEVPGLSVEEFLRAAKEAVLGTKVSVLDFHTQLRAKLARLRISEAYASRGLNVGFSGGEKKKNEILQLAVL
EPKLAILDETDSGLDVDATRIVFEGIDDIRTPDMGFLIITHHREVLEYIKPDVVHILVDGTIVKTGDVSLVHYVVEHGYA
DFATPRAGEQGGTPVSPE

Specific function: Unknown

COG id: COG0396

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, ATPase component

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Escherichia coli, GI1787972, Length=242, Percent_Identity=46.2809917355372, Blast_Score=230, Evalue=9e-62,
Organism=Escherichia coli, GI1789991, Length=234, Percent_Identity=28.2051282051282, Blast_Score=74, Evalue=7e-15,
Organism=Escherichia coli, GI48995001, Length=212, Percent_Identity=27.3584905660377, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1789593, Length=234, Percent_Identity=29.0598290598291, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1790525, Length=215, Percent_Identity=29.3023255813954, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1787792, Length=229, Percent_Identity=27.9475982532751, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI87082268, Length=225, Percent_Identity=28.4444444444444, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1788165, Length=259, Percent_Identity=27.7992277992278, Blast_Score=64, Evalue=8e-12,
Organism=Escherichia coli, GI1787029, Length=201, Percent_Identity=26.865671641791, Blast_Score=64, Evalue=8e-12,
Organism=Escherichia coli, GI1790467, Length=247, Percent_Identity=27.5303643724696, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1789864, Length=236, Percent_Identity=25.4237288135593, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1789962, Length=238, Percent_Identity=27.3109243697479, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1787041, Length=225, Percent_Identity=27.5555555555556, Blast_Score=61, Evalue=6e-11,
Organism=Escherichia coli, GI87081709, Length=226, Percent_Identity=23.4513274336283, Blast_Score=61, Evalue=6e-11,
Organism=Escherichia coli, GI87081791, Length=203, Percent_Identity=26.6009852216749, Blast_Score=61, Evalue=7e-11,
Organism=Escherichia coli, GI1788053, Length=185, Percent_Identity=27.027027027027, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR010230 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 28257; Mature: 28126

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTLLDIRDLCMSIADRPILKSLNLTLNTGEVHAVMGPNGAGKSTLAGTIVGNPHCTIER
CCCCHHHHHHHHHHCCCHHHHHCCEEEECCEEEEEECCCCCCCCCEEEEEECCCCEEEEC
GEIYFQGQCINDVPVYERARRGIFLSFQTPEEVPGLSVEEFLRAAKEAVLGTKVSVLDFH
CEEEECCEECCCCCHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCEEHHHHHH
TQLRAKLARLRISEAYASRGLNVGFSGGEKKKNEILQLAVLEPKLAILDETDSGLDVDAT
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHEEEEEEECCCEEEEECCCCCCCCCHH
RIVFEGIDDIRTPDMGFLIITHHREVLEYIKPDVVHILVDGTIVKTGDVSLVHYVVEHGY
HHEECCCHHCCCCCCCEEEEECCHHHHHHCCCCEEEEEECCEEEECCCHHHHHHHHHCCC
ADFATPRAGEQGGTPVSPE
CCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PTLLDIRDLCMSIADRPILKSLNLTLNTGEVHAVMGPNGAGKSTLAGTIVGNPHCTIER
CCCHHHHHHHHHHCCCHHHHHCCEEEECCEEEEEECCCCCCCCCEEEEEECCCCEEEEC
GEIYFQGQCINDVPVYERARRGIFLSFQTPEEVPGLSVEEFLRAAKEAVLGTKVSVLDFH
CEEEECCEECCCCCHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCEEHHHHHH
TQLRAKLARLRISEAYASRGLNVGFSGGEKKKNEILQLAVLEPKLAILDETDSGLDVDAT
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHEEEEEEECCCEEEEECCCCCCCCCHH
RIVFEGIDDIRTPDMGFLIITHHREVLEYIKPDVVHILVDGTIVKTGDVSLVHYVVEHGY
HHEECCCHHCCCCCCCEEEEECCHHHHHHCCCCEEEEEECCEEEECCCHHHHHHHHHCCC
ADFATPRAGEQGGTPVSPE
CCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12122206; 12799345 [H]