Definition Treponema pallidum subsp. pallidum SS14, complete genome.
Accession NC_010741
Length 1,139,457

Click here to switch to the map view.

The map label for this gene is 189025817

Identifier: 189025817

GI number: 189025817

Start: 642393

End: 642509

Strand: Reverse

Name: 189025817

Synonym: TPASS_0590

Alternate gene names: NA

Gene position: 642509-642393 (Counterclockwise)

Preceding gene: 189025818

Following gene: 189025816

Centisome position: 56.39

GC content: 49.57

Gene sequence:

>117_bases
ATGCAGCACATGCACCGTATTATCGGCCAGATGATACGTACTAGGGGGCTAAAAAACGTGCGGTGTATGGCGGTGGAAGG
AAAGCATAATGGTCGTAAAAACGGTGCGCGTGCTTAA

Upstream 100 bases:

>100_bases
ATCATCCTGGAGACAGCTGCTATGAACGAGCGTTTAAAGCGTATGGGCTATTTTTCTGCAAAGGAATTCAATCAGAGCGT
ACTCAAATTGATGGAGCAGA

Downstream 100 bases:

>100_bases
TCGTGCGGGCGTACATGCGCGTCCTGCGGCGCTTATTGTGCAAGCGGCAAGTCGCTTTGATTCGAAGATAATGCTTGTGC
GGGATACGATCAGAGTGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 38; Mature: 38

Protein sequence:

>38_residues
MQHMHRIIGQMIRTRGLKNVRCMAVEGKHNGRKNGARA

Sequences:

>Translated_38_residues
MQHMHRIIGQMIRTRGLKNVRCMAVEGKHNGRKNGARA
>Mature_38_residues
MQHMHRIIGQMIRTRGLKNVRCMAVEGKHNGRKNGARA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4357; Mature: 4357

Theoretical pI: Translated: 12.51; Mature: 12.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
10.5 %Met     (Translated Protein)
13.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
10.5 %Met     (Mature Protein)
13.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHMHRIIGQMIRTRGLKNVRCMAVEGKHNGRKNGARA
CCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MQHMHRIIGQMIRTRGLKNVRCMAVEGKHNGRKNGARA
CCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA