| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is sstT [H]
Identifier: 189025783
GI number: 189025783
Start: 602363
End: 603553
Strand: Reverse
Name: sstT [H]
Synonym: TPASS_0555
Alternate gene names: 189025783
Gene position: 603553-602363 (Counterclockwise)
Preceding gene: 189025784
Following gene: 189025780
Centisome position: 52.97
GC content: 54.49
Gene sequence:
>1191_bases ATGGCCGGGAGTGCGGGGTTTTGGCTGCTCGCAAAGCTCAGTGGGGGGATGGTCTGTGGCGTTGCGCTCGGGCTGTGCGT TAATGAGTCGGTCATGGCCATTATCCACACGGGGAAAACGCTTATCGGCGGGGTTGTTTTTTTTGTTATTCCCCTAGTTA TTTTTGGTTTTATTGCCCCTACTGTCCTGAGTCTGAAAGCGAGTGCCGGTAGGATGCTAGGCTCGTTTCTGGTACTTTCC TATCTCTCTTCGGTGGGTGCCTCCCTTTTTGCCACCGCGATGGGGCGTGTTGTTATCCCGTATCTTCGGATCCCGCGCAC GGTGGAGGGTTTGCGTACAATCCCTAAGGTTATCTTTACCCTTGAGATTCCGTCTCTTATGCCCGTGGTCACTGCACTTG CTTTTGCTCTCTTGGTGGGGCTGTCTGCCCTCTGGGTAAAAGCACGTGCGGTGGAGCAGGTGCTGTATGAATTTCGTCGC ATGATGGGTGAAGCTATTAGCCGAGTGTTGGTGCCGCTGCTTCCCTTTTTTGTGGCGGCTACCTTCGCAGAACTTGCGTA CAGCGGGAGTTTAACTCGTCAGCTGCCGCTTTTTGCCAAAGTGGTAGCGGTCGTCATTGTGGGTCATCTCCTGTGGCTGT GCGTGTTGTACCTGGTGGGGTGGATACTGTCACGCAAAAATCCGTTCGAGGTACTTCGTCATTATGGAGCGGCGTATGCG ACTGCGCTGGGCACGATGTCGAGTGCAGCAACACTGCCGGTTTCGTTACAATGTGCGCACAAGTCACGGGCACTGCCTGC AGAAATTGTGGATTTTGCGATCCCGCTGGGTGCAACCACACATCTGTGCGGGTCTGTTCTGACGGAGACCTTTTTTTGTC TAACGATAGCGCAGATGTTGTACGGGTCCATGCCCTCTCTTGCAGATATGGTGCTGTTCTCCTGTTTGTTCGGCATTTTT GCCGTAGGTGCGCCGGGGGTTCCAGGGGGTACGGTGCTTGCGTCGCTCGGGCTGGTGCTTGATGTGTTGCACTTTGATAC CACAGGAACCGGTTTGCTCATTGCGATATTTGCTTTGCAAGACAGTTTTGGGACTGCGTGTAACATCACTGGGGATGGCG CCCTGGCACTGATGCTGCGTGGACTTCGCTATACCCTGCGGGCGAACTGCGTTGGGCGTGAAGAGAAGTAG
Upstream 100 bases:
>100_bases CGCCTTCGAGGTTGGTTCTATGACATAAAAAGACCGCTGACCTGTTATCAGAGGATAGTCTTTTTGGTATACTGCCGGCG CGTGTGCGGAGGAGGACGCT
Downstream 100 bases:
>100_bases CGGCTCGTGCCCTGCAGGGATCCGGGAGCGTCGTGCGCTCCGTCTGAGTTTGTACCCGCGAGTCTAGAAAGAAAGGTGCT GGAGTAACTCGGCGGGCGTC
Product: glutamate/aspartate transporter
Products: NA
Alternate protein names: Na(+)/serine-threonine symporter [H]
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MAGSAGFWLLAKLSGGMVCGVALGLCVNESVMAIIHTGKTLIGGVVFFVIPLVIFGFIAPTVLSLKASAGRMLGSFLVLS YLSSVGASLFATAMGRVVIPYLRIPRTVEGLRTIPKVIFTLEIPSLMPVVTALAFALLVGLSALWVKARAVEQVLYEFRR MMGEAISRVLVPLLPFFVAATFAELAYSGSLTRQLPLFAKVVAVVIVGHLLWLCVLYLVGWILSRKNPFEVLRHYGAAYA TALGTMSSAATLPVSLQCAHKSRALPAEIVDFAIPLGATTHLCGSVLTETFFCLTIAQMLYGSMPSLADMVLFSCLFGIF AVGAPGVPGGTVLASLGLVLDVLHFDTTGTGLLIAIFALQDSFGTACNITGDGALALMLRGLRYTLRANCVGREEK
Sequences:
>Translated_396_residues MAGSAGFWLLAKLSGGMVCGVALGLCVNESVMAIIHTGKTLIGGVVFFVIPLVIFGFIAPTVLSLKASAGRMLGSFLVLS YLSSVGASLFATAMGRVVIPYLRIPRTVEGLRTIPKVIFTLEIPSLMPVVTALAFALLVGLSALWVKARAVEQVLYEFRR MMGEAISRVLVPLLPFFVAATFAELAYSGSLTRQLPLFAKVVAVVIVGHLLWLCVLYLVGWILSRKNPFEVLRHYGAAYA TALGTMSSAATLPVSLQCAHKSRALPAEIVDFAIPLGATTHLCGSVLTETFFCLTIAQMLYGSMPSLADMVLFSCLFGIF AVGAPGVPGGTVLASLGLVLDVLHFDTTGTGLLIAIFALQDSFGTACNITGDGALALMLRGLRYTLRANCVGREEK >Mature_395_residues AGSAGFWLLAKLSGGMVCGVALGLCVNESVMAIIHTGKTLIGGVVFFVIPLVIFGFIAPTVLSLKASAGRMLGSFLVLSY LSSVGASLFATAMGRVVIPYLRIPRTVEGLRTIPKVIFTLEIPSLMPVVTALAFALLVGLSALWVKARAVEQVLYEFRRM MGEAISRVLVPLLPFFVAATFAELAYSGSLTRQLPLFAKVVAVVIVGHLLWLCVLYLVGWILSRKNPFEVLRHYGAAYAT ALGTMSSAATLPVSLQCAHKSRALPAEIVDFAIPLGATTHLCGSVLTETFFCLTIAQMLYGSMPSLADMVLFSCLFGIFA VGAPGVPGGTVLASLGLVLDVLHFDTTGTGLLIAIFALQDSFGTACNITGDGALALMLRGLRYTLRANCVGREEK
Specific function: Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system) [H]
COG id: COG1301
COG function: function code C; Na+/H+-dicarboxylate symporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]
Homologues:
Organism=Homo sapiens, GI169790839, Length=272, Percent_Identity=28.3088235294118, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI223468566, Length=224, Percent_Identity=31.25, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI223468564, Length=224, Percent_Identity=31.25, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI5032093, Length=224, Percent_Identity=31.25, Blast_Score=83, Evalue=5e-16, Organism=Homo sapiens, GI21314632, Length=201, Percent_Identity=31.8407960199005, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI66773030, Length=251, Percent_Identity=28.6852589641434, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI40254478, Length=180, Percent_Identity=32.7777777777778, Blast_Score=80, Evalue=4e-15, Organism=Homo sapiens, GI4827012, Length=252, Percent_Identity=30.1587301587302, Blast_Score=80, Evalue=4e-15, Organism=Homo sapiens, GI262359914, Length=178, Percent_Identity=30.8988764044944, Blast_Score=73, Evalue=5e-13, Organism=Homo sapiens, GI194239697, Length=198, Percent_Identity=27.7777777777778, Blast_Score=72, Evalue=8e-13, Organism=Caenorhabditis elegans, GI71983106, Length=261, Percent_Identity=26.8199233716475, Blast_Score=81, Evalue=1e-15, Organism=Caenorhabditis elegans, GI71983099, Length=261, Percent_Identity=26.8199233716475, Blast_Score=81, Evalue=1e-15, Organism=Caenorhabditis elegans, GI71996953, Length=203, Percent_Identity=31.5270935960591, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI193206505, Length=165, Percent_Identity=32.7272727272727, Blast_Score=76, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17537407, Length=200, Percent_Identity=30.5, Blast_Score=76, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17541374, Length=151, Percent_Identity=32.4503311258278, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI193206654, Length=161, Percent_Identity=28.5714285714286, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI24583025, Length=235, Percent_Identity=27.6595744680851, Blast_Score=72, Evalue=8e-13, Organism=Drosophila melanogaster, GI17137668, Length=235, Percent_Identity=27.6595744680851, Blast_Score=72, Evalue=8e-13, Organism=Drosophila melanogaster, GI24583023, Length=235, Percent_Identity=27.6595744680851, Blast_Score=72, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001991 - InterPro: IPR023025 [H]
Pfam domain/function: PF00375 SDF [H]
EC number: NA
Molecular weight: Translated: 41916; Mature: 41785
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGSAGFWLLAKLSGGMVCGVALGLCVNESVMAIIHTGKTLIGGVVFFVIPLVIFGFIAP CCCCCHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH TVLSLKASAGRMLGSFLVLSYLSSVGASLFATAMGRVVIPYLRIPRTVEGLRTIPKVIFT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH LEIPSLMPVVTALAFALLVGLSALWVKARAVEQVLYEFRRMMGEAISRVLVPLLPFFVAA HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TFAELAYSGSLTRQLPLFAKVVAVVIVGHLLWLCVLYLVGWILSRKNPFEVLRHYGAAYA HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH TALGTMSSAATLPVSLQCAHKSRALPAEIVDFAIPLGATTHLCGSVLTETFFCLTIAQML HHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH YGSMPSLADMVLFSCLFGIFAVGAPGVPGGTVLASLGLVLDVLHFDTTGTGLLIAIFALQ HCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH DSFGTACNITGDGALALMLRGLRYTLRANCVGREEK HCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure AGSAGFWLLAKLSGGMVCGVALGLCVNESVMAIIHTGKTLIGGVVFFVIPLVIFGFIAP CCCCHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH TVLSLKASAGRMLGSFLVLSYLSSVGASLFATAMGRVVIPYLRIPRTVEGLRTIPKVIFT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH LEIPSLMPVVTALAFALLVGLSALWVKARAVEQVLYEFRRMMGEAISRVLVPLLPFFVAA HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TFAELAYSGSLTRQLPLFAKVVAVVIVGHLLWLCVLYLVGWILSRKNPFEVLRHYGAAYA HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH TALGTMSSAATLPVSLQCAHKSRALPAEIVDFAIPLGATTHLCGSVLTETFFCLTIAQML HHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH YGSMPSLADMVLFSCLFGIFAVGAPGVPGGTVLASLGLVLDVLHFDTTGTGLLIAIFALQ HCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH DSFGTACNITGDGALALMLRGLRYTLRANCVGREEK HCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]