| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is 189025710
Identifier: 189025710
GI number: 189025710
Start: 510336
End: 511010
Strand: Reverse
Name: 189025710
Synonym: TPASS_0479
Alternate gene names: NA
Gene position: 511010-510336 (Counterclockwise)
Preceding gene: 189025714
Following gene: 189025709
Centisome position: 44.85
GC content: 56.3
Gene sequence:
>675_bases TTGACACTCTCACACCCCACGCGGGAAGATCGGCCCAGTAGGCGTGTCCTACAGCTGGGGTTAGATCGTATGGGTATACA GTGGCACACGGCGAGGGGGGGGGTACGGGCGCGGTGCGTGGTGCGCGTAGGTTCTTTGCTCGCTGCGCTCGGGATGGGGG CAGGCGTTTTTGCGGCGGAGGTATTTGTTTCTCCGAAGGTAGGACAGGTAGGGGCGCATCCCTGGGGAAAGGAACCGGCC CCCAGGACCGACGTTCTTTTGTACACCCCGACGCTCGGTTTGGCAGTGGGGGTAATAGCGCACAACGGCTTCGCGTTCAC GACAGAATTAGACGCGGGGCTTGCCTTTCTTATGTTCCGTGCGCAGTTCCTGGTGGGCTGGGCTATACGCAGCGGCAAGA ATTTTGCATTTATTCCGTCTCTGGGCGTGGATATCCTTTCTACGCAGGACGACAAACTGGTGGGGATACCGATAAATTTG GATTTCCTCATTTTCTTTACCAAGCACGTTGGGTTGGATTTCACCTTCGGCAGCGGAGTGAACGTGCCGCTCACCAAGAA TTTGAAAAAGGGCGCAAATGGGAATGGACAGGACCTGACGTGGTCGAACATATGGGCCAAGTATTGCTGCACCTCGCTGG TCATGGTAAAAATAGGGCCGGTGTTCCGCATTTAG
Upstream 100 bases:
>100_bases TTTTCTAAAGGCTGCGAGGCAATTATTAGGCGTTTAGCGCGCGCCGTCAAGTTTTTCTCACCGTTTGGCATACTCCTCTT CGCAAGGAAGGGGGGAGGGC
Downstream 100 bases:
>100_bases TGCCTTAGGGAGCGGAGAGTCTGCCTGCGGCACATCCGGTGTAGGTCGCACCGTTGAAAGAAGGGGCGGTTTATGGGGAA AATCAGTGGCAGCGGCACGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MTLSHPTREDRPSRRVLQLGLDRMGIQWHTARGGVRARCVVRVGSLLAALGMGAGVFAAEVFVSPKVGQVGAHPWGKEPA PRTDVLLYTPTLGLAVGVIAHNGFAFTTELDAGLAFLMFRAQFLVGWAIRSGKNFAFIPSLGVDILSTQDDKLVGIPINL DFLIFFTKHVGLDFTFGSGVNVPLTKNLKKGANGNGQDLTWSNIWAKYCCTSLVMVKIGPVFRI
Sequences:
>Translated_224_residues MTLSHPTREDRPSRRVLQLGLDRMGIQWHTARGGVRARCVVRVGSLLAALGMGAGVFAAEVFVSPKVGQVGAHPWGKEPA PRTDVLLYTPTLGLAVGVIAHNGFAFTTELDAGLAFLMFRAQFLVGWAIRSGKNFAFIPSLGVDILSTQDDKLVGIPINL DFLIFFTKHVGLDFTFGSGVNVPLTKNLKKGANGNGQDLTWSNIWAKYCCTSLVMVKIGPVFRI >Mature_223_residues TLSHPTREDRPSRRVLQLGLDRMGIQWHTARGGVRARCVVRVGSLLAALGMGAGVFAAEVFVSPKVGQVGAHPWGKEPAP RTDVLLYTPTLGLAVGVIAHNGFAFTTELDAGLAFLMFRAQFLVGWAIRSGKNFAFIPSLGVDILSTQDDKLVGIPINLD FLIFFTKHVGLDFTFGSGVNVPLTKNLKKGANGNGQDLTWSNIWAKYCCTSLVMVKIGPVFRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24239; Mature: 24107
Theoretical pI: Translated: 10.52; Mature: 10.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSHPTREDRPSRRVLQLGLDRMGIQWHTARGGVRARCVVRVGSLLAALGMGAGVFAAE CCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEE VFVSPKVGQVGAHPWGKEPAPRTDVLLYTPTLGLAVGVIAHNGFAFTTELDAGLAFLMFR EEECCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHCCCCEEEEEEHHHHHHHHHHH AQFLVGWAIRSGKNFAFIPSLGVDILSTQDDKLVGIPINLDFLIFFTKHVGLDFTFGSGV HHHHHHHHEECCCCEEEECCCCEEEECCCCCCEEEEECCCEEEEEEEHHCCEEEEECCCC NVPLTKNLKKGANGNGQDLTWSNIWAKYCCTSLVMVKIGPVFRI CCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TLSHPTREDRPSRRVLQLGLDRMGIQWHTARGGVRARCVVRVGSLLAALGMGAGVFAAE CCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEE VFVSPKVGQVGAHPWGKEPAPRTDVLLYTPTLGLAVGVIAHNGFAFTTELDAGLAFLMFR EEECCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHCCCCEEEEEEHHHHHHHHHHH AQFLVGWAIRSGKNFAFIPSLGVDILSTQDDKLVGIPINLDFLIFFTKHVGLDFTFGSGV HHHHHHHHEECCCCEEEECCCCEEEECCCCCCEEEEECCCEEEEEEEHHCCEEEEECCCC NVPLTKNLKKGANGNGQDLTWSNIWAKYCCTSLVMVKIGPVFRI CCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA