| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is 189025668
Identifier: 189025668
GI number: 189025668
Start: 464225
End: 465307
Strand: Reverse
Name: 189025668
Synonym: TPASS_0436
Alternate gene names: NA
Gene position: 465307-464225 (Counterclockwise)
Preceding gene: 189025669
Following gene: 189025667
Centisome position: 40.84
GC content: 59.1
Gene sequence:
>1083_bases ATGTTCAGTTCCAGTCCCCCGAGTTCTCTTCCTAAGTCCGTTTCCTCCCCCTCTCCGTGCGCGGCGCGTACAGGGGATCG GGGGAGGGGTCTTTCCGGGCTCATCGAGTTCATTGACGCGCATCGCGCGTTTGCGGTCGTGGGGCATGAGAAGCCGGATG GGGACTGTGTAGGTTCCAGTCTTGCGCTTGCCTCGTTCCTAAGACGCATAGGGAAAGAGGTTGAGCTTTTGTCTGCGGGT CCTTTCAAGCGTAGAGAGATCGCTGCGTACGCGACACTCTTCCGTCCAAGTCTCTCTGCGCAGATACGGCCGTCTGATCA GACGGCCGTCATCGTGGTCGACTGCTCTGAGCTCAGCCGCGTTGGCGCTGAGCTCGCCTCGCAGCTTGCCCCCTTTGCGC GCGCGTTCATAGACCATCACGAAACGTGCGGCGACCACTGCGCGCACTCGTTCGTCGTAAAAACAGCTCCGTCCACCACT ACATTGGTGCAAACGTTAATCGAGACGATGGCCGGATCTCTTGAAGCAGCCGAGGCGCGCGCACTTTTTTTGGGATTGGC TACGGACACAGGTTTTTTTCGCCACCTCGACGAGCACAGTGCGGACACGTTCGCTTCTGCTGCGCGTCTTGTACGTGCAG GCGCCAATCCGAAGGACACGTTTCTTGCCATGAACGGTGGGAGATCCCTTGCTTCGCGCATGTTGATTGCGCGCGTGCTT TCTCGACTGACGCCGTATTATGGTGGCGCGCTCATGACCTCGTACGAAACTTGCGAAGACGCGGTCCAGTTGGGGCTTGA TGTGCGAGACTCCGATGCTCTGTATCAGCTCATCCAGAGCATCCAGGGCGTCGAGGCAATTGTGGTGGTACGTCAGGAAT CTCCCACACATTGTTCGGTGGGGTTTCGATCGCGAGGATCGATTGACGTAAGCGTTATCGCCGCTCGCTTCGGGGGTGGA GGTCATCGCTGCGCTGCTGGCCTTCGTATCGAGGGCACCGTTGATGAACTGTTACCCCGCTTTGTTGCTGCCTTTGAGGC TCAGATGCGTGCACCCGCGGCCGGGGCGCAGGTGCGCTCCTAA
Upstream 100 bases:
>100_bases GGGAACACACTTACCTACGTAAAGCTCACACTCCCTCGCAGCCTGAGCAGCCCGGTGTGGGGAACGCTGAAAAGTCCTTC TGAGTACGACGATAAGTTTG
Downstream 100 bases:
>100_bases ACCCCACGTTTGCCCCGCGTGCGCGGTGGCCTGCGCTCTTCTCTCACTTTTGGCAAGAGGGAGCGTAACTTTTGCATCGT TGGGCTTTTCTCCCCTGAGT
Product: hypothetical protein
Products: NA
Alternate protein names: Mgp1; ORF-1 protein [H]
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MFSSSPPSSLPKSVSSPSPCAARTGDRGRGLSGLIEFIDAHRAFAVVGHEKPDGDCVGSSLALASFLRRIGKEVELLSAG PFKRREIAAYATLFRPSLSAQIRPSDQTAVIVVDCSELSRVGAELASQLAPFARAFIDHHETCGDHCAHSFVVKTAPSTT TLVQTLIETMAGSLEAAEARALFLGLATDTGFFRHLDEHSADTFASAARLVRAGANPKDTFLAMNGGRSLASRMLIARVL SRLTPYYGGALMTSYETCEDAVQLGLDVRDSDALYQLIQSIQGVEAIVVVRQESPTHCSVGFRSRGSIDVSVIAARFGGG GHRCAAGLRIEGTVDELLPRFVAAFEAQMRAPAAGAQVRS
Sequences:
>Translated_360_residues MFSSSPPSSLPKSVSSPSPCAARTGDRGRGLSGLIEFIDAHRAFAVVGHEKPDGDCVGSSLALASFLRRIGKEVELLSAG PFKRREIAAYATLFRPSLSAQIRPSDQTAVIVVDCSELSRVGAELASQLAPFARAFIDHHETCGDHCAHSFVVKTAPSTT TLVQTLIETMAGSLEAAEARALFLGLATDTGFFRHLDEHSADTFASAARLVRAGANPKDTFLAMNGGRSLASRMLIARVL SRLTPYYGGALMTSYETCEDAVQLGLDVRDSDALYQLIQSIQGVEAIVVVRQESPTHCSVGFRSRGSIDVSVIAARFGGG GHRCAAGLRIEGTVDELLPRFVAAFEAQMRAPAAGAQVRS >Mature_360_residues MFSSSPPSSLPKSVSSPSPCAARTGDRGRGLSGLIEFIDAHRAFAVVGHEKPDGDCVGSSLALASFLRRIGKEVELLSAG PFKRREIAAYATLFRPSLSAQIRPSDQTAVIVVDCSELSRVGAELASQLAPFARAFIDHHETCGDHCAHSFVVKTAPSTT TLVQTLIETMAGSLEAAEARALFLGLATDTGFFRHLDEHSADTFASAARLVRAGANPKDTFLAMNGGRSLASRMLIARVL SRLTPYYGGALMTSYETCEDAVQLGLDVRDSDALYQLIQSIQGVEAIVVVRQESPTHCSVGFRSRGSIDVSVIAARFGGG GHRCAAGLRIEGTVDELLPRFVAAFEAQMRAPAAGAQVRS
Specific function: Unknown
COG id: COG0618
COG function: function code R; Exopolyphosphatase-related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mgp1/MG371 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003156 - InterPro: IPR001667 [H]
Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]
EC number: NA
Molecular weight: Translated: 38169; Mature: 38169
Theoretical pI: Translated: 7.26; Mature: 7.26
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSSSPPSSLPKSVSSPSPCAARTGDRGRGLSGLIEFIDAHRAFAVVGHEKPDGDCVGSS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEECCCCCCCCHHHHH LALASFLRRIGKEVELLSAGPFKRREIAAYATLFRPSLSAQIRPSDQTAVIVVDCSELSR HHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHCCCCCCEECCCCCEEEEEEEHHHHHH VGAELASQLAPFARAFIDHHETCGDHCAHSFVVKTAPSTTTLVQTLIETMAGSLEAAEAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHCCHHHHHHH ALFLGLATDTGFFRHLDEHSADTFASAARLVRAGANPKDTFLAMNGGRSLASRMLIARVL EEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHH SRLTPYYGGALMTSYETCEDAVQLGLDVRDSDALYQLIQSIQGVEAIVVVRQESPTHCSV HHHCHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCEEEC GFRSRGSIDVSVIAARFGGGGHRCAAGLRIEGTVDELLPRFVAAFEAQMRAPAAGAQVRS CCCCCCCEEEEEEEECCCCCCHHEECCCEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MFSSSPPSSLPKSVSSPSPCAARTGDRGRGLSGLIEFIDAHRAFAVVGHEKPDGDCVGSS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEECCCCCCCCHHHHH LALASFLRRIGKEVELLSAGPFKRREIAAYATLFRPSLSAQIRPSDQTAVIVVDCSELSR HHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHCCCCCCEECCCCCEEEEEEEHHHHHH VGAELASQLAPFARAFIDHHETCGDHCAHSFVVKTAPSTTTLVQTLIETMAGSLEAAEAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHCCHHHHHHH ALFLGLATDTGFFRHLDEHSADTFASAARLVRAGANPKDTFLAMNGGRSLASRMLIARVL EEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHH SRLTPYYGGALMTSYETCEDAVQLGLDVRDSDALYQLIQSIQGVEAIVVVRQESPTHCSV HHHCHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCEEEC GFRSRGSIDVSVIAARFGGGGHRCAAGLRIEGTVDELLPRFVAAFEAQMRAPAAGAQVRS CCCCCCCEEEEEEEECCCCCCHHEECCCEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8948633; 2468577 [H]