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The map label for this gene is fliH

Identifier: 189025634

GI number: 189025634

Start: 427258

End: 428187

Strand: Direct

Name: fliH

Synonym: TPASS_0401

Alternate gene names: 189025634

Gene position: 427258-428187 (Clockwise)

Preceding gene: 189025633

Following gene: 189025635

Centisome position: 37.5

GC content: 51.08

Gene sequence:

>930_bases
ATGCCAAAGATGATATTTCGGAACCATGAAGTGAAGAATCTTGATCAGTTCTTGCTGCTTGATCTGAGCAGGTCTTTTGG
TGTCGAGCCTCAGATTGAGGAGGTGCAAAGCGAACCTGTGTGTCCAGTTCCTGATATGCGTGAAGTGCAAGAGGAAGTTG
AGCTGTTTCGAAAAAGTTGGGAAGAAGAGCAGGTGCAGCTGCGCGCGCGTGCAGAGCGTGAGGCACAAGATCTAAAGGAG
CGTGTAGAGGAGGAAATCACAGCATATCGCGAACAGTGTACGCAGGAGGCGGATCGTATCCTTGCTCAGGCAAAGGAACA
GTCTGAGCTACAAATTAGCGAGGCGCAACAGCAAGCTGAACGCATGATTGCTGAGGCAGAGACGTCTCGTCAGAAAATAT
GTGATCACAGTAAGGCAGAAGGTATTCGTCTTGGCAAGGAAGAAGGGTTTCGTGCGGGACAGGAAGAGGTGCGGTATTTA
ACTGAGCGTTTGCATAAGATGATCGAAGAAGTGATGGGGCGGCGTCAGGGTATTTTGCGGGAAACCGAAAGACAGATTGT
TGATCTGGTGTTGTTGATGACAAGGAAGGTGGTCAAGGTCATTTCTGAAAACCAACGCGCTGTTATCAGCGCAAATGTGG
TGCATGCGTTGCGTAAGGTGCGAACGCGCGGAGCGGTGACGCTGCGGGTAAACCTTGCGGATGTGGAGCTTGTTACCCAG
CACAAGCAGGAGTTTATCGCTGCAGTGGAGCGTGTGGATGATCTAACGGTAGTGGAGGACACGTCAGTGGGTAGGGGCGG
TTGCGTGGTGGAAACGGATTTTGGAGAGATTGACGCGCGGGTTGCAAGTCAGCTCCATGAGCTTGAGCAGCGTGTTTTGG
AAGTTGCCCCCATTGTAGTGTCATCAATGTCAGCATCTAAGGGTTCTTGA

Upstream 100 bases:

>100_bases
ATAGTGGTGACATTGTCATCGCGCGTTCAGAAGAAGACGAGATGATTGTGTAAATGTTGTTCCTGATAAGCGATATGGGG
TTCGAAAGGAAGCAGACAGT

Downstream 100 bases:

>100_bases
TAGAGAAAGAGGCGTGGGTGTGCGTGTATGGAAGCAGACCTGTTGTGCAAGTATGAGGTGGCGCTCCGCGAGAGTGAGCC
GGTAAAGTACGTTGGGCATG

Product: flagellar assembly protein H

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MPKMIFRNHEVKNLDQFLLLDLSRSFGVEPQIEEVQSEPVCPVPDMREVQEEVELFRKSWEEEQVQLRARAEREAQDLKE
RVEEEITAYREQCTQEADRILAQAKEQSELQISEAQQQAERMIAEAETSRQKICDHSKAEGIRLGKEEGFRAGQEEVRYL
TERLHKMIEEVMGRRQGILRETERQIVDLVLLMTRKVVKVISENQRAVISANVVHALRKVRTRGAVTLRVNLADVELVTQ
HKQEFIAAVERVDDLTVVEDTSVGRGGCVVETDFGEIDARVASQLHELEQRVLEVAPIVVSSMSASKGS

Sequences:

>Translated_309_residues
MPKMIFRNHEVKNLDQFLLLDLSRSFGVEPQIEEVQSEPVCPVPDMREVQEEVELFRKSWEEEQVQLRARAEREAQDLKE
RVEEEITAYREQCTQEADRILAQAKEQSELQISEAQQQAERMIAEAETSRQKICDHSKAEGIRLGKEEGFRAGQEEVRYL
TERLHKMIEEVMGRRQGILRETERQIVDLVLLMTRKVVKVISENQRAVISANVVHALRKVRTRGAVTLRVNLADVELVTQ
HKQEFIAAVERVDDLTVVEDTSVGRGGCVVETDFGEIDARVASQLHELEQRVLEVAPIVVSSMSASKGS
>Mature_308_residues
PKMIFRNHEVKNLDQFLLLDLSRSFGVEPQIEEVQSEPVCPVPDMREVQEEVELFRKSWEEEQVQLRARAEREAQDLKER
VEEEITAYREQCTQEADRILAQAKEQSELQISEAQQQAERMIAEAETSRQKICDHSKAEGIRLGKEEGFRAGQEEVRYLT
ERLHKMIEEVMGRRQGILRETERQIVDLVLLMTRKVVKVISENQRAVISANVVHALRKVRTRGAVTLRVNLADVELVTQH
KQEFIAAVERVDDLTVVEDTSVGRGGCVVETDFGEIDARVASQLHELEQRVLEVAPIVVSSMSASKGS

Specific function: Needed for flagellar regrowth and assembly

COG id: COG1317

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway protein

Gene ontology:

Cell location: Cytoplasm (Probable)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliH family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): FLIH_TREPA (O83416)

Other databases:

- EMBL:   AE000520
- PIR:   H71328
- RefSeq:   NP_218841.1
- ProteinModelPortal:   O83416
- IntAct:   O83416
- MINT:   MINT-6479507
- GeneID:   2610815
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0401
- NMPDR:   fig|243276.1.peg.400
- TIGR:   TP_0401
- HOGENOM:   HBG250960
- OMA:   NIGKGGC
- ProtClustDB:   PRK06669
- BioCyc:   TPAL243276:TP_0401-MONOMER
- GO:   GO:0005737
- InterPro:   IPR018035

Pfam domain/function: PF02108 FliH

EC number: NA

Molecular weight: Translated: 35340; Mature: 35208

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKMIFRNHEVKNLDQFLLLDLSRSFGVEPQIEEVQSEPVCPVPDMREVQEEVELFRKSW
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHCC
EEEQVQLRARAEREAQDLKERVEEEITAYREQCTQEADRILAQAKEQSELQISEAQQQAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RMIAEAETSRQKICDHSKAEGIRLGKEEGFRAGQEEVRYLTERLHKMIEEVMGRRQGILR
HHHHHHHHHHHHHHCCHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETERQIVDLVLLMTRKVVKVISENQRAVISANVVHALRKVRTRGAVTLRVNLADVELVTQ
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHH
HKQEFIAAVERVDDLTVVEDTSVGRGGCVVETDFGEIDARVASQLHELEQRVLEVAPIVV
HHHHHHHHHHHHCCCEEEECCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSMSASKGS
HHCCCCCCC
>Mature Secondary Structure 
PKMIFRNHEVKNLDQFLLLDLSRSFGVEPQIEEVQSEPVCPVPDMREVQEEVELFRKSW
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHCC
EEEQVQLRARAEREAQDLKERVEEEITAYREQCTQEADRILAQAKEQSELQISEAQQQAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RMIAEAETSRQKICDHSKAEGIRLGKEEGFRAGQEEVRYLTERLHKMIEEVMGRRQGILR
HHHHHHHHHHHHHHCCHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETERQIVDLVLLMTRKVVKVISENQRAVISANVVHALRKVRTRGAVTLRVNLADVELVTQ
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHH
HKQEFIAAVERVDDLTVVEDTSVGRGGCVVETDFGEIDARVASQLHELEQRVLEVAPIVV
HHHHHHHHHHHHCCCEEEECCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSMSASKGS
HHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876