| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is 189025615
Identifier: 189025615
GI number: 189025615
Start: 409199
End: 409321
Strand: Direct
Name: 189025615
Synonym: TPASS_0382
Alternate gene names: NA
Gene position: 409199-409321 (Clockwise)
Preceding gene: 189025611
Following gene: 189025616
Centisome position: 35.91
GC content: 58.54
Gene sequence:
>123_bases GTGGGGGCTGCGGGGAAAGAAGGAGCACAGTGTCAGGGAGGGGATGTATGTGAGCTGGTCCGGCACAGGTTGACAATGCA GGCGGATGTGCTAGAATCCGGGGGAGTTTGTGGGAGGATTTAG
Upstream 100 bases:
>100_bases AGCTCTGCACCCAGCATACGTCCACCCCCCCCCCCCCGACGAGAAAAAGAACATTGTCACCCATACCGTTGCCGGTTGTC CAGTAAATTTTTGCGATAGG
Downstream 100 bases:
>100_bases GAAAAATATAGGGGAAGGTAGGAAATCGTGGAGGATAACGCCTTTACTGGAGCGTACTCGTACAATCTCGATGAAAAGGG GCGTCTCATGCTTCCTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 40; Mature: 39
Protein sequence:
>40_residues MGAAGKEGAQCQGGDVCELVRHRLTMQADVLESGGVCGRI
Sequences:
>Translated_40_residues MGAAGKEGAQCQGGDVCELVRHRLTMQADVLESGGVCGRI >Mature_39_residues GAAGKEGAQCQGGDVCELVRHRLTMQADVLESGGVCGRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y382_TREPA (O83397)
Other databases:
- EMBL: AE000520 - PIR: H71330 - RefSeq: NP_218822.1 - ProteinModelPortal: O83397 - IntAct: O83397 - GeneID: 2611274 - GenomeReviews: AE000520_GR - KEGG: tpa:TP0382 - NMPDR: fig|243276.1.peg.381 - TIGR: TP_0382 - HOGENOM: HBG731994 - ProtClustDB: CLSK2300206 - BioCyc: TPAL243276:TP_0382-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4104; Mature: 3973
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.5 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 12.5 %Cys+Met (Translated Protein) 7.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 10.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAAGKEGAQCQGGDVCELVRHRLTMQADVLESGGVCGRI CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure GAAGKEGAQCQGGDVCELVRHRLTMQADVLESGGVCGRI CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876