Definition Treponema pallidum subsp. pallidum SS14, complete genome.
Accession NC_010741
Length 1,139,457

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The map label for this gene is 189025581

Identifier: 189025581

GI number: 189025581

Start: 373696

End: 375105

Strand: Reverse

Name: 189025581

Synonym: TPASS_0348

Alternate gene names: NA

Gene position: 375105-373696 (Counterclockwise)

Preceding gene: 189025582

Following gene: 189025577

Centisome position: 32.92

GC content: 59.86

Gene sequence:

>1410_bases
GTGCGGCTCGTGCGGAGCAGGCTGCCACTAGACGTACGCGATGAGTTAGTGTCGCTTTTAGGCGGCATGTGTTTCTTTCT
CTCTACGGTTGAACACGTCATTCCAAAGCCGCTGCCTTTCTTTCGCGTGGGGCTTGCGAATTTGCCGCTGTTGATCTCGC
CGGATCTGCTCCCTTTCTGTGCGTACGCGCGTTTAGTATTCCTGAAGGTAATAGGGCAGGCTCTGGTGAGTGGGACGCTC
TTTTCTTATGTATTTGTCCTCTCGCTTGCAGGGAGCACCGCTTCGGGTGCGCTCATGTATGCGCTGCGGTTCGTCCCGTG
CCGGTACCTTTCGTGCGTGGGGATAAGCGTGATGGGTGCGTTCTGTTCAAACGTGATACAGCTTACGCTTGCTCGGGTGC
TCGTTTTTGGCGCGGGGGTGTGGTACGTACTCCCGCTATTTTGCGCGCTGGGGGCAGTGAGCAGTACCTTACTCGGAGCG
CTAACCGGCCATTTTCTCTCCCACTCCCAGTGGTACGCGCACCTGCAGAACGCGGCATGCGGACAACAAGACACCGCACC
GCCTGCGTCTCTTTTTTTTCCGGTACAGGCGGGGTGTGAATGCACGGCGCCGTGTTCGGAACACGGGCTTAGGCCGCGTG
TGCTGCGTTATGTACGGATGGGGACAGGACTCCTGCTCCTGTTGATACTGCTGTGTGTGCCGCGGCTGAGCGTGCAGGCG
TCCGTGTGCGGGATCGCACTGCTGCTCTATGCGGCAACGGGGGGACGCATCCGCTGGATGACCTTGGCAGGGCTGTGGGT
GGGAACGCTCGCCTGCTACCTTAGACCGCCGGTTGGACGCGTGTGGGCAACGGTGCTTGGGGTCCCCCTGACGAGCGGTG
CGCTTTCGGCAGGAGCGCGCCAGGCCTGCATGGCCTCGGGGATGGTATACCTTTCAAAGTGGATACTGCGCGTGCCGCCG
CACCTGCCGGGAAAGTTCGGGCAGACAGTCGTCCACGCGCTTTCGCTCATGCACCGGCTGAGCTCGTTCAAGTGCGCGGC
GCACGACGGAACGCTACACAAGAAATCGACCGCATTCTTCTCGCGCTCTGGGCAACTCGACAGCGGACGCCAACGCGCCG
CTAAATCCGCCCCCCCCCGCACGCTATATTCGAAAGGTAGGACCGGCCCGCAGCGTGACCGGGAGAATGAGACAACGCGT
GGTGTCGCTCAAAAAGTAATTCACCGCCTTCTGCGCAATCCAAGCGCTCTGCGACACAATCCAACTGAATCCCTCGGCAA
CAACGGTCAGAGCGAAGGTAATAAACCAGCCCAAATCCAATGCCTTGATAATCCCTTCGCTAATAAGCTTTTGCCGCAGC
GCAACGAGCGCCACGCGCTGCACCGTTTCTGCAGGCAGCTTACCTGCTAA

Upstream 100 bases:

>100_bases
TGGCTGTGCGCTCTGTGCGAGAGGCGACGGACGATGACTTAGCTGCACTTCTGTTTCGGGAAAGCACCAGCGGCGGTGGC
TGTGGGAGCGGCGCGGGAGG

Downstream 100 bases:

>100_bases
AAAGCGGGTGTTAGGGTTGAGCGGAAAGTCCACCCCGCCGCTCACACTCAAGGCAAAGCCCCACCACTCAGAAATCAAAT
GCTGGAACGACACTTGCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 469; Mature: 469

Protein sequence:

>469_residues
MRLVRSRLPLDVRDELVSLLGGMCFFLSTVEHVIPKPLPFFRVGLANLPLLISPDLLPFCAYARLVFLKVIGQALVSGTL
FSYVFVLSLAGSTASGALMYALRFVPCRYLSCVGISVMGAFCSNVIQLTLARVLVFGAGVWYVLPLFCALGAVSSTLLGA
LTGHFLSHSQWYAHLQNAACGQQDTAPPASLFFPVQAGCECTAPCSEHGLRPRVLRYVRMGTGLLLLLILLCVPRLSVQA
SVCGIALLLYAATGGRIRWMTLAGLWVGTLACYLRPPVGRVWATVLGVPLTSGALSAGARQACMASGMVYLSKWILRVPP
HLPGKFGQTVVHALSLMHRLSSFKCAAHDGTLHKKSTAFFSRSGQLDSGRQRAAKSAPPRTLYSKGRTGPQRDRENETTR
GVAQKVIHRLLRNPSALRHNPTESLGNNGQSEGNKPAQIQCLDNPFANKLLPQRNERHALHRFCRQLTC

Sequences:

>Translated_469_residues
MRLVRSRLPLDVRDELVSLLGGMCFFLSTVEHVIPKPLPFFRVGLANLPLLISPDLLPFCAYARLVFLKVIGQALVSGTL
FSYVFVLSLAGSTASGALMYALRFVPCRYLSCVGISVMGAFCSNVIQLTLARVLVFGAGVWYVLPLFCALGAVSSTLLGA
LTGHFLSHSQWYAHLQNAACGQQDTAPPASLFFPVQAGCECTAPCSEHGLRPRVLRYVRMGTGLLLLLILLCVPRLSVQA
SVCGIALLLYAATGGRIRWMTLAGLWVGTLACYLRPPVGRVWATVLGVPLTSGALSAGARQACMASGMVYLSKWILRVPP
HLPGKFGQTVVHALSLMHRLSSFKCAAHDGTLHKKSTAFFSRSGQLDSGRQRAAKSAPPRTLYSKGRTGPQRDRENETTR
GVAQKVIHRLLRNPSALRHNPTESLGNNGQSEGNKPAQIQCLDNPFANKLLPQRNERHALHRFCRQLTC
>Mature_469_residues
MRLVRSRLPLDVRDELVSLLGGMCFFLSTVEHVIPKPLPFFRVGLANLPLLISPDLLPFCAYARLVFLKVIGQALVSGTL
FSYVFVLSLAGSTASGALMYALRFVPCRYLSCVGISVMGAFCSNVIQLTLARVLVFGAGVWYVLPLFCALGAVSSTLLGA
LTGHFLSHSQWYAHLQNAACGQQDTAPPASLFFPVQAGCECTAPCSEHGLRPRVLRYVRMGTGLLLLLILLCVPRLSVQA
SVCGIALLLYAATGGRIRWMTLAGLWVGTLACYLRPPVGRVWATVLGVPLTSGALSAGARQACMASGMVYLSKWILRVPP
HLPGKFGQTVVHALSLMHRLSSFKCAAHDGTLHKKSTAFFSRSGQLDSGRQRAAKSAPPRTLYSKGRTGPQRDRENETTR
GVAQKVIHRLLRNPSALRHNPTESLGNNGQSEGNKPAQIQCLDNPFANKLLPQRNERHALHRFCRQLTC

Specific function: Unknown

COG id: COG4769

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50957; Mature: 50957

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CHHHHCCCCCCCCCCCCEEEECCCHHHHHHCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure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CHHHHCCCCCCCCCCCCEEEECCCHHHHHHCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA