| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is 189025579
Identifier: 189025579
GI number: 189025579
Start: 372462
End: 373163
Strand: Direct
Name: 189025579
Synonym: TPASS_0346
Alternate gene names: NA
Gene position: 372462-373163 (Clockwise)
Preceding gene: 189025578
Following gene: 189025580
Centisome position: 32.69
GC content: 54.84
Gene sequence:
>702_bases GTGTGTATGGTGCCGGTGAGAAGGTTCATAGCGGTGTGTGCGGTGACGGCGTGTGCCGGGCCGTGTTTTTGCGTTCAAGC GTTTATCTCTTCTCGGATCGGGTATGGGCACTTTGGGATATATGGGAACGAGATAAAGGACTCCTACTACAAACATGTTC CGATGACGGGACTAGGGGTTGACGTGGTAACGTCTTCAGGCGTTGCGATGGTGTTCAATGTGGAGACTGCGTTGACGCAG CTCATGTTTCGCGCGCAGGCGCTGCTGGGGTACGCGTTTGAGGTTGGCAGGTTCCGCTTTACACCTGCCATTGGCGGCAG TTTCCTTGCGTCGCACGACCACGCCGCAGGGGTGGCTCTGTCGCTTGACTTTCAGTATTTCTTTAATGATTGGGTCGGGT TGGACCTGAACATAGGCGCGGGGGTGGATGTTCCGGTGAACAGTAACCTGCGTTACCTGGTGCGGGTGGGGACGCCGGAG TTAGCGAAGATTCTCATCACGCATACAGTGACGCATGGACTGGCTAATCGCTGGATATCAGGTCCCCACTGGTGGAATTC TCTTTCTTCGTGGGTCGGGAATACCGCGGGAAAAGTGGCTGGATTTGTAGCGCGTTTGATAGCAAATTATCTGCTGAAAG GCTCACAGTACAGCATGTTGGTCCCAGTGGTTGTTCGCCTGGGGGCGGTATACAAGGTGTGA
Upstream 100 bases:
>100_bases ATCCGGCGCCTTGACGTGCGTTTATTTCTTTTGCTAGCCTGCCCCTAATTGCTTTCCGTTTCCGGAATGATGGTAGAGGA GACAGGGCGGAAGGCGTGGG
Downstream 100 bases:
>100_bases GGGAGTTGGCATTCGGGGGGCGTGTGCGGAAATGAAATGGAGTGGGCTCTGTCTCTTTCTCCGGACGGGGGGGGGGGGGT GCGAACAGATGAACGGAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MCMVPVRRFIAVCAVTACAGPCFCVQAFISSRIGYGHFGIYGNEIKDSYYKHVPMTGLGVDVVTSSGVAMVFNVETALTQ LMFRAQALLGYAFEVGRFRFTPAIGGSFLASHDHAAGVALSLDFQYFFNDWVGLDLNIGAGVDVPVNSNLRYLVRVGTPE LAKILITHTVTHGLANRWISGPHWWNSLSSWVGNTAGKVAGFVARLIANYLLKGSQYSMLVPVVVRLGAVYKV
Sequences:
>Translated_233_residues MCMVPVRRFIAVCAVTACAGPCFCVQAFISSRIGYGHFGIYGNEIKDSYYKHVPMTGLGVDVVTSSGVAMVFNVETALTQ LMFRAQALLGYAFEVGRFRFTPAIGGSFLASHDHAAGVALSLDFQYFFNDWVGLDLNIGAGVDVPVNSNLRYLVRVGTPE LAKILITHTVTHGLANRWISGPHWWNSLSSWVGNTAGKVAGFVARLIANYLLKGSQYSMLVPVVVRLGAVYKV >Mature_233_residues MCMVPVRRFIAVCAVTACAGPCFCVQAFISSRIGYGHFGIYGNEIKDSYYKHVPMTGLGVDVVTSSGVAMVFNVETALTQ LMFRAQALLGYAFEVGRFRFTPAIGGSFLASHDHAAGVALSLDFQYFFNDWVGLDLNIGAGVDVPVNSNLRYLVRVGTPE LAKILITHTVTHGLANRWISGPHWWNSLSSWVGNTAGKVAGFVARLIANYLLKGSQYSMLVPVVVRLGAVYKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25290; Mature: 25290
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCMVPVRRFIAVCAVTACAGPCFCVQAFISSRIGYGHFGIYGNEIKDSYYKHVPMTGLGV CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHCCCCCCCCE DVVTSSGVAMVFNVETALTQLMFRAQALLGYAFEVGRFRFTPAIGGSFLASHDHAAGVAL EEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCHHHCCCCCCCEEE SLDFQYFFNDWVGLDLNIGAGVDVPVNSNLRYLVRVGTPELAKILITHTVTHGLANRWIS EEEHHHHHCCCCCEEEECCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCC GPHWWNSLSSWVGNTAGKVAGFVARLIANYLLKGSQYSMLVPVVVRLGAVYKV CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MCMVPVRRFIAVCAVTACAGPCFCVQAFISSRIGYGHFGIYGNEIKDSYYKHVPMTGLGV CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHCCCCCCCCE DVVTSSGVAMVFNVETALTQLMFRAQALLGYAFEVGRFRFTPAIGGSFLASHDHAAGVAL EEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCHHHCCCCCCCEEE SLDFQYFFNDWVGLDLNIGAGVDVPVNSNLRYLVRVGTPELAKILITHTVTHGLANRWIS EEEHHHHHCCCCCEEEECCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCC GPHWWNSLSSWVGNTAGKVAGFVARLIANYLLKGSQYSMLVPVVVRLGAVYKV CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA