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The map label for this gene is ompH

Identifier: 189025560

GI number: 189025560

Start: 348074

End: 348592

Strand: Direct

Name: ompH

Synonym: TPASS_0327

Alternate gene names: NA

Gene position: 348074-348592 (Clockwise)

Preceding gene: 189025559

Following gene: 189025561

Centisome position: 30.55

GC content: 51.06

Gene sequence:

>519_bases
ATGAAAGCGACGCTTACCTTTGTCTTTATGCTCCTTACGTCGCTGCTGCAGGGTCAGTCGCAACACATCACGCGCTTTGC
CGTCATAGATGCGGCCCGCATTTACTCAACCTTTTGGCGCGATTCGCGCGTCCTGCGCGATTATGAATCTAAAAAAGCAC
GGCACCAGGGTGAAATTCAGAAAATGTCTGATGAGCTCGTAGAGCTCCGGCAAAAAAAAGTTGACGCGCAGATGCAGCAA
AACATCGCGTCAGTCCAAAAGTACGAGGTGCTCATTGCGTCAAAAACCGCGCTCCTGTTGGAGTATTCTAAAACGTCCAA
CGACGAGCTCACCGCGCTGCGCAAAACGCTCATCGCAGATGACGCATTCTATGCAAAACTCTACGCCGCTATTAGGCGAA
TTGCAGAAAGTGAAGGCTACAGCATCGTCTTAGATCTGCAAAAAAACGCCGGAATACTCTGGTACAGCCACTCGGTCGAT
ATTACCGAAGACGTCCTGCGGGAGCTGAGCAGCTCGTGA

Upstream 100 bases:

>100_bases
AAGATTGGAATTTTGTGTTGTCGTTCACGGTAAATAATTTGTAGCGTTCCGTGCCCGTTTTGAAACGGTCCGGGGCTGCG
TCCACCAGGCAAGGAGTGAT

Downstream 100 bases:

>100_bases
TGCACCGTGAGCACCGCGTCTCCTGCCTCCTACGTGTTGGCCCAGGAGCGTCCACGTGAGGTCCCTCGCGTCAGATACCC
CTCTCATGCGTCAGTACCAC

Product: cationic outer membrane protein

Products: NA

Alternate protein names: Outer Membrane Chaperone Skp; Cationic Outer Membrane Protein

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MKATLTFVFMLLTSLLQGQSQHITRFAVIDAARIYSTFWRDSRVLRDYESKKARHQGEIQKMSDELVELRQKKVDAQMQQ
NIASVQKYEVLIASKTALLLEYSKTSNDELTALRKTLIADDAFYAKLYAAIRRIAESEGYSIVLDLQKNAGILWYSHSVD
ITEDVLRELSSS

Sequences:

>Translated_172_residues
MKATLTFVFMLLTSLLQGQSQHITRFAVIDAARIYSTFWRDSRVLRDYESKKARHQGEIQKMSDELVELRQKKVDAQMQQ
NIASVQKYEVLIASKTALLLEYSKTSNDELTALRKTLIADDAFYAKLYAAIRRIAESEGYSIVLDLQKNAGILWYSHSVD
ITEDVLRELSSS
>Mature_172_residues
MKATLTFVFMLLTSLLQGQSQHITRFAVIDAARIYSTFWRDSRVLRDYESKKARHQGEIQKMSDELVELRQKKVDAQMQQ
NIASVQKYEVLIASKTALLLEYSKTSNDELTALRKTLIADDAFYAKLYAAIRRIAESEGYSIVLDLQKNAGILWYSHSVD
ITEDVLRELSSS

Specific function: Unknown

COG id: COG2825

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19716; Mature: 19716

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKATLTFVFMLLTSLLQGQSQHITRFAVIDAARIYSTFWRDSRVLRDYESKKARHQGEIQ
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KMSDELVELRQKKVDAQMQQNIASVQKYEVLIASKTALLLEYSKTSNDELTALRKTLIAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEECCCCCHHHHHHHHHHHHC
DAFYAKLYAAIRRIAESEGYSIVLDLQKNAGILWYSHSVDITEDVLRELSSS
HHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHCC
>Mature Secondary Structure
MKATLTFVFMLLTSLLQGQSQHITRFAVIDAARIYSTFWRDSRVLRDYESKKARHQGEIQ
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KMSDELVELRQKKVDAQMQQNIASVQKYEVLIASKTALLLEYSKTSNDELTALRKTLIAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEECCCCCHHHHHHHHHHHHC
DAFYAKLYAAIRRIAESEGYSIVLDLQKNAGILWYSHSVDITEDVLRELSSS
HHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA