| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is 189025545
Identifier: 189025545
GI number: 189025545
Start: 327934
End: 328077
Strand: Reverse
Name: 189025545
Synonym: TPASS_0311
Alternate gene names: NA
Gene position: 328077-327934 (Counterclockwise)
Preceding gene: 189025548
Following gene: 189025538
Centisome position: 28.79
GC content: 55.56
Gene sequence:
>144_bases ATGACCGGTGAACTCATGCTCCGCCTCCCCTGCTGGTCTTCTTTCTGCGAAAAAACGCACCCTCCCCTTCATCCGGGCAC TTCTCTCAGTTCAACCGCGTCCATCGCATGCGCAACACACCCTCACCATACAAAAGGAGTCTGA
Upstream 100 bases:
>100_bases AATCAGTAATTCCCACGTGCCACAGAGCAGCGCAACCGTACCCCCCGAAAGACCCGGTACCACGTTTGCCGCTCCTATTA ACATTCCTATCCACACGTGC
Downstream 100 bases:
>100_bases AACTCTACATGCTCAGCGACAATCTTTACCCGCTGCACTCGCACCCCGTCCTCCTGCTGCCAACGATCCTGCTTGAGACG GCCGACCACCCGCAACCCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 47; Mature: 46
Protein sequence:
>47_residues MTGELMLRLPCWSSFCEKTHPPLHPGTSLSSTASIACATHPHHTKGV
Sequences:
>Translated_47_residues MTGELMLRLPCWSSFCEKTHPPLHPGTSLSSTASIACATHPHHTKGV >Mature_46_residues TGELMLRLPCWSSFCEKTHPPLHPGTSLSSTASIACATHPHHTKGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y311_TREPA (O83333)
Other databases:
- EMBL: AE000520 - PIR: A71340 - RefSeq: NP_218752.1 - ProteinModelPortal: O83333 - GeneID: 2611701 - GenomeReviews: AE000520_GR - KEGG: tpa:TP0311 - NMPDR: fig|243276.1.peg.311 - TIGR: TP_0311 - HOGENOM: HBG250945 - ProtClustDB: CLSK2300188 - BioCyc: TPAL243276:TP_0311-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5057; Mature: 4926
Theoretical pI: Translated: 8.11; Mature: 8.11
Prosite motif: PS00152 ATPASE_ALPHA_BETA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.4 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 10.6 %Cys+Met (Translated Protein) 6.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 8.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGELMLRLPCWSSFCEKTHPPLHPGTSLSSTASIACATHPHHTKGV CCCCEEEECCCCHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCC >Mature Secondary Structure TGELMLRLPCWSSFCEKTHPPLHPGTSLSSTASIACATHPHHTKGV CCCEEEECCCCHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876