| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is 189025412
Identifier: 189025412
GI number: 189025412
Start: 197815
End: 199698
Strand: Reverse
Name: 189025412
Synonym: TPASS_0179
Alternate gene names: NA
Gene position: 199698-197815 (Counterclockwise)
Preceding gene: 189025413
Following gene: 189025411
Centisome position: 17.53
GC content: 60.83
Gene sequence:
>1884_bases ATGACACAGGCACTGCAGGTGCCTTCCGCACCCGCGCGTTGCCGTCATTTACGGCGTAAGAACGGGGTGCTTTTACGAAT TGTTGAAAAAACGGACCGCACACGCTATGCTCATGCTTTGCGGCACGGCTGCCGACACAGGATGTGTGAGGGAGTTCACG GCACAGAGGAAGATGCTATGGGATCAGAGTCAGCAGAAATGGACAGTCCACACGCAACTGCACGCCCTCAGGAGCAGGGG GAAGACCGTGCCTGGGATGCGTGTGGCGTGTGGGTAAAGGTACCGCCGGAAGCGCAGGAGCCACCCGTCAGCTCAGGTGG CCCAGAGGATCCAGAGGCGCCTGCCCAACACGCTCCCCCGGGTGCGCGCGTGGATGCGGTGCGGCACCATGTGTACCGTG CGCTTCCTGTGCAGTCCTCTGCAGAGGATTCTCGTGGCTTTGTTGACCTCTCCGTGGAGGACGAGGTGCTCGCTCGCGGG TGCAGCCACGCTCCGGGTGGCGAGTCCTCCTCCGACCAGGCGGCAGATGCGCCAGCCGGAGATGCCGCTTACTCGGAGGT GCCGTCGTTCGACGATTTGGTCACACGCACCGCGCAGTCTCAGGACGACAGAGTTGATCTATCGGCAGCGATGAGCTCCG TTGTGACCGAAGAGCCGCCAGAGCCGCGCGGGTGCAGCATGCCCTGCCCCAGCGGGTCGTGCGACACCACAGAGTTCGAC GACTTGCTCTCGAGTTTGAGCCACGACGCACCGGAATACCCGGTCGATTCCGACCCTATCACTTACTCTGCTTCGGAGCC TTCTTCGGAAGGACCGGTACGCGGCGCCCCATTCAGTGACGTGGACGCAGTTGCGCAGTCCCTCATGGGTGATGCCCAGG TGGCCGCGCAGGGGGCGCAGGCCAGTACCTCAGGCGATGCTTCCACCGATTTGCTTCTGAAAATTGCACAGGAAATCAGC AGTATCCGCGCTGATCTAGACCAGCTGAAGGGAACCTTCTCCCGGCAAGCTGGCGCCGAGCCTGCTCAGGCTCCCGCCAC CGCTCCGGCTCCGGAAGGAACAGAGGCTGCCTACTCCGGGTTTTTCTGTGACGATGATCCAGACGAGACGATTGCGCTTA CCAACGATGAGCTGAACAATATCCTCATCACCTCTGAGTTTACCGAGGAAGATGGGAAAGACTCTGCGGCCGACGCATTT GGTGGTGAACTCAGTGGTTTTGAGTCCTCTCACATCGAGTCCGCTGCAGGCGATTTCAGCTACCTAGAGAAGGACGACCA CGCTGCAGCGCGCGTCGCGCAGGAGCAGTGGGTGCAACAGGGGCGTGCTACCCTTGGAAACGAAGTTTTCGATGTGAAAG AGCAGGGGGCTCACGCGGATCGTGACGCTGCGGCCGGTCCGTCTCCTGTTGCCAAAGATGACGCATCGCCTGAGGCTCAA CGGGCGCACGTTTCCTCCACCGGCCTCGATGCAGCCGGTACCGAGCAGCCCCTCAATACTGAAAATGTCTTCGACGACGA CGACACCCAGCGCGAAGATACATCGTTCCCACTGCCAGAAGAGCAGGAGTTGGACGTCTCCGTTCCCTCGCTAGAGTTTT CTGCTCCCCACGCGATTGAAACCGCTGCCTCTGAGTCTTCGGAGGTTGCCACGCCGGTGGCAATCGAGTCCCCGCCCCAA TCGGAAGCGGCCCGTCCTGCGCAGGGGGATTCTGCCAACCTTGCACCTCCCCTCTCAAAGAGCCTTGCCGACGAGGTGCG CTCTGTGCTCGGGTATATGGACCGGCTGCTCGAAAGTCTGCCCGAGGAGAAGATCGAGGAGTTTGCGCGATCGGAGTATT TCCACACGTACAAACACCTCTTTGACGAGCTAGGGATTTCCTAA
Upstream 100 bases:
>100_bases ATGCGCATAGAGTCCTCACCGCTTCCTCTGACTGCGTGTCTGCACTGTCTTCCACATCTTCACCCCTGTTTTTGTCCGTA CCCCCCCCCGCCAGGAGGTA
Downstream 100 bases:
>100_bases TGGGTCTTATCGCGCGCGCTTCCCGCATCCGGCGTAGCTCGGGTGTCTCCTGCGAGTACTACCGCCTGGAGCTGCAGTTC GTACAGCTGGTTGAATCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 627; Mature: 626
Protein sequence:
>627_residues MTQALQVPSAPARCRHLRRKNGVLLRIVEKTDRTRYAHALRHGCRHRMCEGVHGTEEDAMGSESAEMDSPHATARPQEQG EDRAWDACGVWVKVPPEAQEPPVSSGGPEDPEAPAQHAPPGARVDAVRHHVYRALPVQSSAEDSRGFVDLSVEDEVLARG CSHAPGGESSSDQAADAPAGDAAYSEVPSFDDLVTRTAQSQDDRVDLSAAMSSVVTEEPPEPRGCSMPCPSGSCDTTEFD DLLSSLSHDAPEYPVDSDPITYSASEPSSEGPVRGAPFSDVDAVAQSLMGDAQVAAQGAQASTSGDASTDLLLKIAQEIS SIRADLDQLKGTFSRQAGAEPAQAPATAPAPEGTEAAYSGFFCDDDPDETIALTNDELNNILITSEFTEEDGKDSAADAF GGELSGFESSHIESAAGDFSYLEKDDHAAARVAQEQWVQQGRATLGNEVFDVKEQGAHADRDAAAGPSPVAKDDASPEAQ RAHVSSTGLDAAGTEQPLNTENVFDDDDTQREDTSFPLPEEQELDVSVPSLEFSAPHAIETAASESSEVATPVAIESPPQ SEAARPAQGDSANLAPPLSKSLADEVRSVLGYMDRLLESLPEEKIEEFARSEYFHTYKHLFDELGIS
Sequences:
>Translated_627_residues MTQALQVPSAPARCRHLRRKNGVLLRIVEKTDRTRYAHALRHGCRHRMCEGVHGTEEDAMGSESAEMDSPHATARPQEQG EDRAWDACGVWVKVPPEAQEPPVSSGGPEDPEAPAQHAPPGARVDAVRHHVYRALPVQSSAEDSRGFVDLSVEDEVLARG CSHAPGGESSSDQAADAPAGDAAYSEVPSFDDLVTRTAQSQDDRVDLSAAMSSVVTEEPPEPRGCSMPCPSGSCDTTEFD DLLSSLSHDAPEYPVDSDPITYSASEPSSEGPVRGAPFSDVDAVAQSLMGDAQVAAQGAQASTSGDASTDLLLKIAQEIS SIRADLDQLKGTFSRQAGAEPAQAPATAPAPEGTEAAYSGFFCDDDPDETIALTNDELNNILITSEFTEEDGKDSAADAF GGELSGFESSHIESAAGDFSYLEKDDHAAARVAQEQWVQQGRATLGNEVFDVKEQGAHADRDAAAGPSPVAKDDASPEAQ RAHVSSTGLDAAGTEQPLNTENVFDDDDTQREDTSFPLPEEQELDVSVPSLEFSAPHAIETAASESSEVATPVAIESPPQ SEAARPAQGDSANLAPPLSKSLADEVRSVLGYMDRLLESLPEEKIEEFARSEYFHTYKHLFDELGIS >Mature_626_residues TQALQVPSAPARCRHLRRKNGVLLRIVEKTDRTRYAHALRHGCRHRMCEGVHGTEEDAMGSESAEMDSPHATARPQEQGE DRAWDACGVWVKVPPEAQEPPVSSGGPEDPEAPAQHAPPGARVDAVRHHVYRALPVQSSAEDSRGFVDLSVEDEVLARGC SHAPGGESSSDQAADAPAGDAAYSEVPSFDDLVTRTAQSQDDRVDLSAAMSSVVTEEPPEPRGCSMPCPSGSCDTTEFDD LLSSLSHDAPEYPVDSDPITYSASEPSSEGPVRGAPFSDVDAVAQSLMGDAQVAAQGAQASTSGDASTDLLLKIAQEISS IRADLDQLKGTFSRQAGAEPAQAPATAPAPEGTEAAYSGFFCDDDPDETIALTNDELNNILITSEFTEEDGKDSAADAFG GELSGFESSHIESAAGDFSYLEKDDHAAARVAQEQWVQQGRATLGNEVFDVKEQGAHADRDAAAGPSPVAKDDASPEAQR AHVSSTGLDAAGTEQPLNTENVFDDDDTQREDTSFPLPEEQELDVSVPSLEFSAPHAIETAASESSEVATPVAIESPPQS EAARPAQGDSANLAPPLSKSLADEVRSVLGYMDRLLESLPEEKIEEFARSEYFHTYKHLFDELGIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66565; Mature: 66434
Theoretical pI: Translated: 4.04; Mature: 4.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQALQVPSAPARCRHLRRKNGVLLRIVEKTDRTRYAHALRHGCRHRMCEGVHGTEEDAM CCCCCCCCCCHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHC GSESAEMDSPHATARPQEQGEDRAWDACGVWVKVPPEAQEPPVSSGGPEDPEAPAQHAPP CCCCCCCCCCCCCCCCHHCCCCCCHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC GARVDAVRHHVYRALPVQSSAEDSRGFVDLSVEDEVLARGCSHAPGGESSSDQAADAPAG CHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCC DAAYSEVPSFDDLVTRTAQSQDDRVDLSAAMSSVVTEEPPEPRGCSMPCPSGSCDTTEFD CHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHH DLLSSLSHDAPEYPVDSDPITYSASEPSSEGPVRGAPFSDVDAVAQSLMGDAQVAAQGAQ HHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHCCCC ASTSGDASTDLLLKIAQEISSIRADLDQLKGTFSRQAGAEPAQAPATAPAPEGTEAAYSG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCC FFCDDDPDETIALTNDELNNILITSEFTEEDGKDSAADAFGGELSGFESSHIESAAGDFS CCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCHHHHHCCCCCCCCCHHHHHHHCCCHH YLEKDDHAAARVAQEQWVQQGRATLGNEVFDVKEQGAHADRDAAAGPSPVAKDDASPEAQ HHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHH RAHVSSTGLDAAGTEQPLNTENVFDDDDTQREDTSFPLPEEQELDVSVPSLEFSAPHAIE HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH TAASESSEVATPVAIESPPQSEAARPAQGDSANLAPPLSKSLADEVRSVLGYMDRLLESL HHHCCCCCCCCCEEECCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC PEEKIEEFARSEYFHTYKHLFDELGIS CHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TQALQVPSAPARCRHLRRKNGVLLRIVEKTDRTRYAHALRHGCRHRMCEGVHGTEEDAM CCCCCCCCCHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHC GSESAEMDSPHATARPQEQGEDRAWDACGVWVKVPPEAQEPPVSSGGPEDPEAPAQHAPP CCCCCCCCCCCCCCCCHHCCCCCCHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC GARVDAVRHHVYRALPVQSSAEDSRGFVDLSVEDEVLARGCSHAPGGESSSDQAADAPAG CHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCC DAAYSEVPSFDDLVTRTAQSQDDRVDLSAAMSSVVTEEPPEPRGCSMPCPSGSCDTTEFD CHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHH DLLSSLSHDAPEYPVDSDPITYSASEPSSEGPVRGAPFSDVDAVAQSLMGDAQVAAQGAQ HHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHCCCC ASTSGDASTDLLLKIAQEISSIRADLDQLKGTFSRQAGAEPAQAPATAPAPEGTEAAYSG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCC FFCDDDPDETIALTNDELNNILITSEFTEEDGKDSAADAFGGELSGFESSHIESAAGDFS CCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCHHHHHCCCCCCCCCHHHHHHHCCCHH YLEKDDHAAARVAQEQWVQQGRATLGNEVFDVKEQGAHADRDAAAGPSPVAKDDASPEAQ HHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHH RAHVSSTGLDAAGTEQPLNTENVFDDDDTQREDTSFPLPEEQELDVSVPSLEFSAPHAIE HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH TAASESSEVATPVAIESPPQSEAARPAQGDSANLAPPLSKSLADEVRSVLGYMDRLLESL HHHCCCCCCCCCEEECCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC PEEKIEEFARSEYFHTYKHLFDELGIS CHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]