Definition Treponema pallidum subsp. pallidum SS14, complete genome.
Accession NC_010741
Length 1,139,457

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The map label for this gene is 189025412

Identifier: 189025412

GI number: 189025412

Start: 197815

End: 199698

Strand: Reverse

Name: 189025412

Synonym: TPASS_0179

Alternate gene names: NA

Gene position: 199698-197815 (Counterclockwise)

Preceding gene: 189025413

Following gene: 189025411

Centisome position: 17.53

GC content: 60.83

Gene sequence:

>1884_bases
ATGACACAGGCACTGCAGGTGCCTTCCGCACCCGCGCGTTGCCGTCATTTACGGCGTAAGAACGGGGTGCTTTTACGAAT
TGTTGAAAAAACGGACCGCACACGCTATGCTCATGCTTTGCGGCACGGCTGCCGACACAGGATGTGTGAGGGAGTTCACG
GCACAGAGGAAGATGCTATGGGATCAGAGTCAGCAGAAATGGACAGTCCACACGCAACTGCACGCCCTCAGGAGCAGGGG
GAAGACCGTGCCTGGGATGCGTGTGGCGTGTGGGTAAAGGTACCGCCGGAAGCGCAGGAGCCACCCGTCAGCTCAGGTGG
CCCAGAGGATCCAGAGGCGCCTGCCCAACACGCTCCCCCGGGTGCGCGCGTGGATGCGGTGCGGCACCATGTGTACCGTG
CGCTTCCTGTGCAGTCCTCTGCAGAGGATTCTCGTGGCTTTGTTGACCTCTCCGTGGAGGACGAGGTGCTCGCTCGCGGG
TGCAGCCACGCTCCGGGTGGCGAGTCCTCCTCCGACCAGGCGGCAGATGCGCCAGCCGGAGATGCCGCTTACTCGGAGGT
GCCGTCGTTCGACGATTTGGTCACACGCACCGCGCAGTCTCAGGACGACAGAGTTGATCTATCGGCAGCGATGAGCTCCG
TTGTGACCGAAGAGCCGCCAGAGCCGCGCGGGTGCAGCATGCCCTGCCCCAGCGGGTCGTGCGACACCACAGAGTTCGAC
GACTTGCTCTCGAGTTTGAGCCACGACGCACCGGAATACCCGGTCGATTCCGACCCTATCACTTACTCTGCTTCGGAGCC
TTCTTCGGAAGGACCGGTACGCGGCGCCCCATTCAGTGACGTGGACGCAGTTGCGCAGTCCCTCATGGGTGATGCCCAGG
TGGCCGCGCAGGGGGCGCAGGCCAGTACCTCAGGCGATGCTTCCACCGATTTGCTTCTGAAAATTGCACAGGAAATCAGC
AGTATCCGCGCTGATCTAGACCAGCTGAAGGGAACCTTCTCCCGGCAAGCTGGCGCCGAGCCTGCTCAGGCTCCCGCCAC
CGCTCCGGCTCCGGAAGGAACAGAGGCTGCCTACTCCGGGTTTTTCTGTGACGATGATCCAGACGAGACGATTGCGCTTA
CCAACGATGAGCTGAACAATATCCTCATCACCTCTGAGTTTACCGAGGAAGATGGGAAAGACTCTGCGGCCGACGCATTT
GGTGGTGAACTCAGTGGTTTTGAGTCCTCTCACATCGAGTCCGCTGCAGGCGATTTCAGCTACCTAGAGAAGGACGACCA
CGCTGCAGCGCGCGTCGCGCAGGAGCAGTGGGTGCAACAGGGGCGTGCTACCCTTGGAAACGAAGTTTTCGATGTGAAAG
AGCAGGGGGCTCACGCGGATCGTGACGCTGCGGCCGGTCCGTCTCCTGTTGCCAAAGATGACGCATCGCCTGAGGCTCAA
CGGGCGCACGTTTCCTCCACCGGCCTCGATGCAGCCGGTACCGAGCAGCCCCTCAATACTGAAAATGTCTTCGACGACGA
CGACACCCAGCGCGAAGATACATCGTTCCCACTGCCAGAAGAGCAGGAGTTGGACGTCTCCGTTCCCTCGCTAGAGTTTT
CTGCTCCCCACGCGATTGAAACCGCTGCCTCTGAGTCTTCGGAGGTTGCCACGCCGGTGGCAATCGAGTCCCCGCCCCAA
TCGGAAGCGGCCCGTCCTGCGCAGGGGGATTCTGCCAACCTTGCACCTCCCCTCTCAAAGAGCCTTGCCGACGAGGTGCG
CTCTGTGCTCGGGTATATGGACCGGCTGCTCGAAAGTCTGCCCGAGGAGAAGATCGAGGAGTTTGCGCGATCGGAGTATT
TCCACACGTACAAACACCTCTTTGACGAGCTAGGGATTTCCTAA

Upstream 100 bases:

>100_bases
ATGCGCATAGAGTCCTCACCGCTTCCTCTGACTGCGTGTCTGCACTGTCTTCCACATCTTCACCCCTGTTTTTGTCCGTA
CCCCCCCCCGCCAGGAGGTA

Downstream 100 bases:

>100_bases
TGGGTCTTATCGCGCGCGCTTCCCGCATCCGGCGTAGCTCGGGTGTCTCCTGCGAGTACTACCGCCTGGAGCTGCAGTTC
GTACAGCTGGTTGAATCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 627; Mature: 626

Protein sequence:

>627_residues
MTQALQVPSAPARCRHLRRKNGVLLRIVEKTDRTRYAHALRHGCRHRMCEGVHGTEEDAMGSESAEMDSPHATARPQEQG
EDRAWDACGVWVKVPPEAQEPPVSSGGPEDPEAPAQHAPPGARVDAVRHHVYRALPVQSSAEDSRGFVDLSVEDEVLARG
CSHAPGGESSSDQAADAPAGDAAYSEVPSFDDLVTRTAQSQDDRVDLSAAMSSVVTEEPPEPRGCSMPCPSGSCDTTEFD
DLLSSLSHDAPEYPVDSDPITYSASEPSSEGPVRGAPFSDVDAVAQSLMGDAQVAAQGAQASTSGDASTDLLLKIAQEIS
SIRADLDQLKGTFSRQAGAEPAQAPATAPAPEGTEAAYSGFFCDDDPDETIALTNDELNNILITSEFTEEDGKDSAADAF
GGELSGFESSHIESAAGDFSYLEKDDHAAARVAQEQWVQQGRATLGNEVFDVKEQGAHADRDAAAGPSPVAKDDASPEAQ
RAHVSSTGLDAAGTEQPLNTENVFDDDDTQREDTSFPLPEEQELDVSVPSLEFSAPHAIETAASESSEVATPVAIESPPQ
SEAARPAQGDSANLAPPLSKSLADEVRSVLGYMDRLLESLPEEKIEEFARSEYFHTYKHLFDELGIS

Sequences:

>Translated_627_residues
MTQALQVPSAPARCRHLRRKNGVLLRIVEKTDRTRYAHALRHGCRHRMCEGVHGTEEDAMGSESAEMDSPHATARPQEQG
EDRAWDACGVWVKVPPEAQEPPVSSGGPEDPEAPAQHAPPGARVDAVRHHVYRALPVQSSAEDSRGFVDLSVEDEVLARG
CSHAPGGESSSDQAADAPAGDAAYSEVPSFDDLVTRTAQSQDDRVDLSAAMSSVVTEEPPEPRGCSMPCPSGSCDTTEFD
DLLSSLSHDAPEYPVDSDPITYSASEPSSEGPVRGAPFSDVDAVAQSLMGDAQVAAQGAQASTSGDASTDLLLKIAQEIS
SIRADLDQLKGTFSRQAGAEPAQAPATAPAPEGTEAAYSGFFCDDDPDETIALTNDELNNILITSEFTEEDGKDSAADAF
GGELSGFESSHIESAAGDFSYLEKDDHAAARVAQEQWVQQGRATLGNEVFDVKEQGAHADRDAAAGPSPVAKDDASPEAQ
RAHVSSTGLDAAGTEQPLNTENVFDDDDTQREDTSFPLPEEQELDVSVPSLEFSAPHAIETAASESSEVATPVAIESPPQ
SEAARPAQGDSANLAPPLSKSLADEVRSVLGYMDRLLESLPEEKIEEFARSEYFHTYKHLFDELGIS
>Mature_626_residues
TQALQVPSAPARCRHLRRKNGVLLRIVEKTDRTRYAHALRHGCRHRMCEGVHGTEEDAMGSESAEMDSPHATARPQEQGE
DRAWDACGVWVKVPPEAQEPPVSSGGPEDPEAPAQHAPPGARVDAVRHHVYRALPVQSSAEDSRGFVDLSVEDEVLARGC
SHAPGGESSSDQAADAPAGDAAYSEVPSFDDLVTRTAQSQDDRVDLSAAMSSVVTEEPPEPRGCSMPCPSGSCDTTEFDD
LLSSLSHDAPEYPVDSDPITYSASEPSSEGPVRGAPFSDVDAVAQSLMGDAQVAAQGAQASTSGDASTDLLLKIAQEISS
IRADLDQLKGTFSRQAGAEPAQAPATAPAPEGTEAAYSGFFCDDDPDETIALTNDELNNILITSEFTEEDGKDSAADAFG
GELSGFESSHIESAAGDFSYLEKDDHAAARVAQEQWVQQGRATLGNEVFDVKEQGAHADRDAAAGPSPVAKDDASPEAQR
AHVSSTGLDAAGTEQPLNTENVFDDDDTQREDTSFPLPEEQELDVSVPSLEFSAPHAIETAASESSEVATPVAIESPPQS
EAARPAQGDSANLAPPLSKSLADEVRSVLGYMDRLLESLPEEKIEEFARSEYFHTYKHLFDELGIS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66565; Mature: 66434

Theoretical pI: Translated: 4.04; Mature: 4.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQALQVPSAPARCRHLRRKNGVLLRIVEKTDRTRYAHALRHGCRHRMCEGVHGTEEDAM
CCCCCCCCCCHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHC
GSESAEMDSPHATARPQEQGEDRAWDACGVWVKVPPEAQEPPVSSGGPEDPEAPAQHAPP
CCCCCCCCCCCCCCCCHHCCCCCCHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
GARVDAVRHHVYRALPVQSSAEDSRGFVDLSVEDEVLARGCSHAPGGESSSDQAADAPAG
CHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCC
DAAYSEVPSFDDLVTRTAQSQDDRVDLSAAMSSVVTEEPPEPRGCSMPCPSGSCDTTEFD
CHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHH
DLLSSLSHDAPEYPVDSDPITYSASEPSSEGPVRGAPFSDVDAVAQSLMGDAQVAAQGAQ
HHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHCCCC
ASTSGDASTDLLLKIAQEISSIRADLDQLKGTFSRQAGAEPAQAPATAPAPEGTEAAYSG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCC
FFCDDDPDETIALTNDELNNILITSEFTEEDGKDSAADAFGGELSGFESSHIESAAGDFS
CCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCHHHHHCCCCCCCCCHHHHHHHCCCHH
YLEKDDHAAARVAQEQWVQQGRATLGNEVFDVKEQGAHADRDAAAGPSPVAKDDASPEAQ
HHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHH
RAHVSSTGLDAAGTEQPLNTENVFDDDDTQREDTSFPLPEEQELDVSVPSLEFSAPHAIE
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
TAASESSEVATPVAIESPPQSEAARPAQGDSANLAPPLSKSLADEVRSVLGYMDRLLESL
HHHCCCCCCCCCEEECCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
PEEKIEEFARSEYFHTYKHLFDELGIS
CHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TQALQVPSAPARCRHLRRKNGVLLRIVEKTDRTRYAHALRHGCRHRMCEGVHGTEEDAM
CCCCCCCCCHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHC
GSESAEMDSPHATARPQEQGEDRAWDACGVWVKVPPEAQEPPVSSGGPEDPEAPAQHAPP
CCCCCCCCCCCCCCCCHHCCCCCCHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
GARVDAVRHHVYRALPVQSSAEDSRGFVDLSVEDEVLARGCSHAPGGESSSDQAADAPAG
CHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCC
DAAYSEVPSFDDLVTRTAQSQDDRVDLSAAMSSVVTEEPPEPRGCSMPCPSGSCDTTEFD
CHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHH
DLLSSLSHDAPEYPVDSDPITYSASEPSSEGPVRGAPFSDVDAVAQSLMGDAQVAAQGAQ
HHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHCCCC
ASTSGDASTDLLLKIAQEISSIRADLDQLKGTFSRQAGAEPAQAPATAPAPEGTEAAYSG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCC
FFCDDDPDETIALTNDELNNILITSEFTEEDGKDSAADAFGGELSGFESSHIESAAGDFS
CCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCHHHHHCCCCCCCCCHHHHHHHCCCHH
YLEKDDHAAARVAQEQWVQQGRATLGNEVFDVKEQGAHADRDAAAGPSPVAKDDASPEAQ
HHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHH
RAHVSSTGLDAAGTEQPLNTENVFDDDDTQREDTSFPLPEEQELDVSVPSLEFSAPHAIE
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
TAASESSEVATPVAIESPPQSEAARPAQGDSANLAPPLSKSLADEVRSVLGYMDRLLESL
HHHCCCCCCCCCEEECCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
PEEKIEEFARSEYFHTYKHLFDELGIS
CHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]