Click here to switch to the map view.

The map label for this gene is tprD

Identifier: 189025365

GI number: 189025365

Start: 152357

End: 154153

Strand: Reverse

Name: tprD

Synonym: TPASS_0131

Alternate gene names: NA

Gene position: 154153-152357 (Counterclockwise)

Preceding gene: 189025366

Following gene: 189025364

Centisome position: 13.53

GC content: 56.09

Gene sequence:

>1797_bases
GTGGGCAGGCAGGTGATGCAAGCGGGGGTACTTGCGGGCATGGTATGTGCTGCTTCTGGTTATGCAGGCGTACTCACTCC
GCAGGTCAGTGGCACAGCCCAGCTCCAGTGGGGCATTGCGTTCCAGAAGAATCCACGCACTGGCCCGGGCAAGCACACCC
ATGGGTTTCGCACTACCAATAGTCTGACTATTTCCCTGCCGTTGGTGTCAAAGCACACCCACACCCGCCGAGGGGAGGCA
CGCTCAGGGGTGTGGGCACAGCTGCAGCTGAAGGACCTGGCAGTAGAGCTTGCGTCTTCTAAAAGCTCAACGGCCCTGTC
CTTTACCAAACCTACCGCTTCCTTCCAGGCAACCCTGCACTGTTATGGGGCCTACCTGACAGTGGGTACCAGTCCTTCCT
GTGTGGTTAACTTTGCCCAGCTGTGGAAACCCTTTGTCACCCGTGCCTATTCAGAAAAGGACACTCGCTATGCCCCTGGT
TTCTCCGGCTCCGGGGCAAAACTCGGCTACCAGGCCCACAATGTGGGAAACAGCGGAGTAGATGTGGACATCGGTTTCCT
CTCCTTCCTTTCCAATGGTGCCTGGGATAGTACTGACACCACGCACAGCAAGTATGGCTTCGGGGCCGATGCAACGCTTT
CCTATGGCGTCGACCGTCAGCGGCTGCTTACGTTGGAGCTGGCAGGGAATGCCACACTGGACCAGAACTACGTTAAGGGT
ACCGAAGACTCCAAGAACGAAAACAAAACAGCACTCCTGTGGGGAGTAGGAGGCCGACTCACCCTCGAACCAGGCGCCGG
CTTCCGCTTCTCCTTCGCCCTCGACGCCGGTAACCAACACCAGAGTAACGCACATGCTCAGACCCAAGAGAGAGCTATCC
TCAAAGCAAGGGAAGTGTTTAGACGGGTGGAGGGGAAACTCGTGCAGAACCTTCCCAATATCATGATGCCACCAGGAATC
ACCGAACAAACCACTCTCATAGAGATGGTAGGACTTGCTGCTTTGATTGCAGAAGGAACGCTCGGCAGCGCCATTCAAAC
CGTGCTAGCCGCTGGCGCGCTCGCGGCGCTTGTATCGCAACTTGTACCGAACATAGAGCAAGGAGTACGTGATGTCTTCC
GCTCTTCCGATCCAAGAGTTGTCACTGCTAAACTTCTCGCTTTCCTTGAGCGCGCACCTATGAACGCGCTCAACATAGAC
GCGCTCCTGCGTATGCAGTGGAAGTGGCTCTCTTCTGGCATATACTTTGCCACCGCAGGCACTAATATCTTTGGCAAACG
CGTCTTTGCTACCACTCGTGCGCACTACTTTGATTTTGCCGGATTCCTTAAGCTCGAAACCAAAAGCGGTGACCCCTACA
CCCACCTGCTCACCGGCCTGAACGCCGGCGTCGAAGCACGCGTGTACATCCCCCTCACCTACGTCTTTTACAGAAATAAC
GGAGGGTACGAACTGAATAGAGTTGTGCCCCCTGGGACTATCAATATGCCAATTTTGGGGAAGGCGTGGTGCAGCTATCG
CATCCCCCTCGGTTCCCACGCCTGGCTTGCACCACACACATCCGTGCTCGGCACAACCAATCGCTTTAACATTATTAACC
CCGCGGGCAACCTGTTGAATGAACGAGCGCTCCAGTACCAGGTGGGACTGACGTTCAGTCCCTTCGAGAAGGTGGAGCTC
AGCGCCCAGTGGGAACAGGGCGTGCTTGCTGACGCTCCTTACATGGGCATTGCCGAGAGCATCTGGTCCGAACGCCACTT
CGGCACCCTTGTCTGCGGAATGAAAGTGACATGGTAA

Upstream 100 bases:

>100_bases
TCAAATTGTTTTTGCTTTCCCGCCTCTTTTTTATTTTTACGTCACATATTCCCTAGACGGGTGGGGGGGGGTGAGGTAGA
AGTGAGAGGAGGGGGAGTGA

Downstream 100 bases:

>100_bases
AAGCGCGTGCACTCCCCGTGCGTTAGCGGCTATGCCACAGCCCGAGCCGGAGCCGACATCAACTTCCCGGTGTGGGACGT
CCGCCCGCATCGAAGGCCAG

Product: protein TprD

Products: NA

Alternate protein names: TPR Protein J; TPR Protein D; TPR Protein B; TPR Protein H; TPR Protein G; TPR Protein I; TPR Protein E; TPR Protein K; TPR Protein L; Outer Sheath Protein

Number of amino acids: Translated: 598; Mature: 597

Protein sequence:

>598_residues
MGRQVMQAGVLAGMVCAASGYAGVLTPQVSGTAQLQWGIAFQKNPRTGPGKHTHGFRTTNSLTISLPLVSKHTHTRRGEA
RSGVWAQLQLKDLAVELASSKSSTALSFTKPTASFQATLHCYGAYLTVGTSPSCVVNFAQLWKPFVTRAYSEKDTRYAPG
FSGSGAKLGYQAHNVGNSGVDVDIGFLSFLSNGAWDSTDTTHSKYGFGADATLSYGVDRQRLLTLELAGNATLDQNYVKG
TEDSKNENKTALLWGVGGRLTLEPGAGFRFSFALDAGNQHQSNAHAQTQERAILKAREVFRRVEGKLVQNLPNIMMPPGI
TEQTTLIEMVGLAALIAEGTLGSAIQTVLAAGALAALVSQLVPNIEQGVRDVFRSSDPRVVTAKLLAFLERAPMNALNID
ALLRMQWKWLSSGIYFATAGTNIFGKRVFATTRAHYFDFAGFLKLETKSGDPYTHLLTGLNAGVEARVYIPLTYVFYRNN
GGYELNRVVPPGTINMPILGKAWCSYRIPLGSHAWLAPHTSVLGTTNRFNIINPAGNLLNERALQYQVGLTFSPFEKVEL
SAQWEQGVLADAPYMGIAESIWSERHFGTLVCGMKVTW

Sequences:

>Translated_598_residues
MGRQVMQAGVLAGMVCAASGYAGVLTPQVSGTAQLQWGIAFQKNPRTGPGKHTHGFRTTNSLTISLPLVSKHTHTRRGEA
RSGVWAQLQLKDLAVELASSKSSTALSFTKPTASFQATLHCYGAYLTVGTSPSCVVNFAQLWKPFVTRAYSEKDTRYAPG
FSGSGAKLGYQAHNVGNSGVDVDIGFLSFLSNGAWDSTDTTHSKYGFGADATLSYGVDRQRLLTLELAGNATLDQNYVKG
TEDSKNENKTALLWGVGGRLTLEPGAGFRFSFALDAGNQHQSNAHAQTQERAILKAREVFRRVEGKLVQNLPNIMMPPGI
TEQTTLIEMVGLAALIAEGTLGSAIQTVLAAGALAALVSQLVPNIEQGVRDVFRSSDPRVVTAKLLAFLERAPMNALNID
ALLRMQWKWLSSGIYFATAGTNIFGKRVFATTRAHYFDFAGFLKLETKSGDPYTHLLTGLNAGVEARVYIPLTYVFYRNN
GGYELNRVVPPGTINMPILGKAWCSYRIPLGSHAWLAPHTSVLGTTNRFNIINPAGNLLNERALQYQVGLTFSPFEKVEL
SAQWEQGVLADAPYMGIAESIWSERHFGTLVCGMKVTW
>Mature_597_residues
GRQVMQAGVLAGMVCAASGYAGVLTPQVSGTAQLQWGIAFQKNPRTGPGKHTHGFRTTNSLTISLPLVSKHTHTRRGEAR
SGVWAQLQLKDLAVELASSKSSTALSFTKPTASFQATLHCYGAYLTVGTSPSCVVNFAQLWKPFVTRAYSEKDTRYAPGF
SGSGAKLGYQAHNVGNSGVDVDIGFLSFLSNGAWDSTDTTHSKYGFGADATLSYGVDRQRLLTLELAGNATLDQNYVKGT
EDSKNENKTALLWGVGGRLTLEPGAGFRFSFALDAGNQHQSNAHAQTQERAILKAREVFRRVEGKLVQNLPNIMMPPGIT
EQTTLIEMVGLAALIAEGTLGSAIQTVLAAGALAALVSQLVPNIEQGVRDVFRSSDPRVVTAKLLAFLERAPMNALNIDA
LLRMQWKWLSSGIYFATAGTNIFGKRVFATTRAHYFDFAGFLKLETKSGDPYTHLLTGLNAGVEARVYIPLTYVFYRNNG
GYELNRVVPPGTINMPILGKAWCSYRIPLGSHAWLAPHTSVLGTTNRFNIINPAGNLLNERALQYQVGLTFSPFEKVELS
AQWEQGVLADAPYMGIAESIWSERHFGTLVCGMKVTW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64841; Mature: 64709

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRQVMQAGVLAGMVCAASGYAGVLTPQVSGTAQLQWGIAFQKNPRTGPGKHTHGFRTTN
CCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEECC
SLTISLPLVSKHTHTRRGEARSGVWAQLQLKDLAVELASSKSSTALSFTKPTASFQATLH
EEEEEEEEECCCCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCEEEEECCCCCCEEEEE
CYGAYLTVGTSPSCVVNFAQLWKPFVTRAYSEKDTRYAPGFSGSGAKLGYQAHNVGNSGV
EEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECEEECCCCCCCC
DVDIGFLSFLSNGAWDSTDTTHSKYGFGADATLSYGVDRQRLLTLELAGNATLDQNYVKG
EEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEEECCCCCCCCCCCCC
TEDSKNENKTALLWGVGGRLTLEPGAGFRFSFALDAGNQHQSNAHAQTQERAILKAREVF
CCCCCCCCCEEEEEECCCEEEECCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHH
RRVEGKLVQNLPNIMMPPGITEQTTLIEMVGLAALIAEGTLGSAIQTVLAAGALAALVSQ
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
LVPNIEQGVRDVFRSSDPRVVTAKLLAFLERAPMNALNIDALLRMQWKWLSSGIYFATAG
HCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEECC
TNIFGKRVFATTRAHYFDFAGFLKLETKSGDPYTHLLTGLNAGVEARVYIPLTYVFYRNN
CCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHCCCCCCEEEEEEEEEEEEEECC
GGYELNRVVPPGTINMPILGKAWCSYRIPLGSHAWLAPHTSVLGTTNRFNIINPAGNLLN
CCEEEEEECCCCCCCCCEEECCCEEEECCCCCCCEECCCCHHEECCCCEEEECCHHHHHH
ERALQYQVGLTFSPFEKVELSAQWEQGVLADAPYMGIAESIWSERHFGTLVCGMKVTW
HHHEEEEECCEECCHHHEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEECC
>Mature Secondary Structure 
GRQVMQAGVLAGMVCAASGYAGVLTPQVSGTAQLQWGIAFQKNPRTGPGKHTHGFRTTN
CHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEECC
SLTISLPLVSKHTHTRRGEARSGVWAQLQLKDLAVELASSKSSTALSFTKPTASFQATLH
EEEEEEEEECCCCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCEEEEECCCCCCEEEEE
CYGAYLTVGTSPSCVVNFAQLWKPFVTRAYSEKDTRYAPGFSGSGAKLGYQAHNVGNSGV
EEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECEEECCCCCCCC
DVDIGFLSFLSNGAWDSTDTTHSKYGFGADATLSYGVDRQRLLTLELAGNATLDQNYVKG
EEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEEECCCCCCCCCCCCC
TEDSKNENKTALLWGVGGRLTLEPGAGFRFSFALDAGNQHQSNAHAQTQERAILKAREVF
CCCCCCCCCEEEEEECCCEEEECCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHH
RRVEGKLVQNLPNIMMPPGITEQTTLIEMVGLAALIAEGTLGSAIQTVLAAGALAALVSQ
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
LVPNIEQGVRDVFRSSDPRVVTAKLLAFLERAPMNALNIDALLRMQWKWLSSGIYFATAG
HCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEECC
TNIFGKRVFATTRAHYFDFAGFLKLETKSGDPYTHLLTGLNAGVEARVYIPLTYVFYRNN
CCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHCCCCCCEEEEEEEEEEEEEECC
GGYELNRVVPPGTINMPILGKAWCSYRIPLGSHAWLAPHTSVLGTTNRFNIINPAGNLLN
CCEEEEEECCCCCCCCCEEECCCEEEECCCCCCCEECCCCHHEECCCCEEEECCHHHHHH
ERALQYQVGLTFSPFEKVELSAQWEQGVLADAPYMGIAESIWSERHFGTLVCGMKVTW
HHHEEEEECCEECCHHHEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA