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The map label for this gene is ccdA [C]

Identifier: 189025335

GI number: 189025335

Start: 108915

End: 109709

Strand: Direct

Name: ccdA [C]

Synonym: TPASS_0101

Alternate gene names: 189025335

Gene position: 108915-109709 (Clockwise)

Preceding gene: 189025334

Following gene: 189025337

Centisome position: 9.56

GC content: 55.35

Gene sequence:

>795_bases
GTGACTAGTGTCCCCGGCGTTGTGGGTTCCTTTTTGGCCGGGTTGCTTTCTTTTCTCAGTCCCTGCGTCCTGCCGCTTAT
TCCGGCGTACGTCTCTTTCATTTCGGGAGAATCGCTCGGTTCTATCCGGGCGGGGGCGGCGCGGCTCCAGGTTTTTCTCA
GCAGTGTTTTTTTTGTATTAGGACTGACGACGGTTTTTGTGTTGTTTTCAATCGTATTTAGCGGAGGGGTGCAGCTTGCA
GGTGCGGGTGTGCTCACTGTGCTCACGCGTGTAGCGGGCGTGGGGGTGATACTCCTCGGCTTAAACACAATCTTCGACGT
GGTTCCGTTTTTGCGTGTGGAAAGGCGTATGCACACAACGGTGCGACGGGTGGGTGTGTTTCGTGCGTATCTTTTTGGGT
TGCTGTTCGCAACGGGATGGACTCCGTGCGTGGGGCCGATTCTCTCTTCTCTGTTGTTCTATGCGGCGAGTTCTGGGCAG
CTGCTCCACGCAGCAGGGCTCCTGACCGTGTATGCACTGGGATTGGGACTTCCCTTCGTGTTTGCAGGGATCTTTTTTGG
ACGTGCGGAGCGGGTGTTTGCGTGGGTAAAGAGTCACATGCACGCAGTAAAGCTCGCCTCCGGGATGTTGATCGTCTTTT
TCGGACTGCTGATGCTAACGTCGGGGTTGCAGGCACTCAGTCGGCTTTTTCTACGGGCAGGATTCGCGTTAGAGGAATAC
TCGACGCGGGGAATAACCCCTCTTCGGCAAATAGCGGCACTTCTTGCGCAGTGGTTTTTGTACCAGGGGGTTTGA

Upstream 100 bases:

>100_bases
ACTTATGTTGTGGACAAGGCAGGGCGCATCGTGGCAGTGGTTGTCGGGAGTGTGGAGTATGACCAACCAGAGCTAGTGGC
TCTCTTTAAGGAACTGGCGC

Downstream 100 bases:

>100_bases
GCGCGAGCGGCTTTGGGGCTGTGCGGGTGGGTAGCCATCACGTAAATAGTTTTTTGATGCGTGTGAAGGCCCGCGTGACC
TCTTCCTCGCTTATTTTTCC

Product: cytochrome c biogenesis protein

Products: DsbDoxidized; DsbGreduced [C]

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 263

Protein sequence:

>264_residues
MTSVPGVVGSFLAGLLSFLSPCVLPLIPAYVSFISGESLGSIRAGAARLQVFLSSVFFVLGLTTVFVLFSIVFSGGVQLA
GAGVLTVLTRVAGVGVILLGLNTIFDVVPFLRVERRMHTTVRRVGVFRAYLFGLLFATGWTPCVGPILSSLLFYAASSGQ
LLHAAGLLTVYALGLGLPFVFAGIFFGRAERVFAWVKSHMHAVKLASGMLIVFFGLLMLTSGLQALSRLFLRAGFALEEY
STRGITPLRQIAALLAQWFLYQGV

Sequences:

>Translated_264_residues
MTSVPGVVGSFLAGLLSFLSPCVLPLIPAYVSFISGESLGSIRAGAARLQVFLSSVFFVLGLTTVFVLFSIVFSGGVQLA
GAGVLTVLTRVAGVGVILLGLNTIFDVVPFLRVERRMHTTVRRVGVFRAYLFGLLFATGWTPCVGPILSSLLFYAASSGQ
LLHAAGLLTVYALGLGLPFVFAGIFFGRAERVFAWVKSHMHAVKLASGMLIVFFGLLMLTSGLQALSRLFLRAGFALEEY
STRGITPLRQIAALLAQWFLYQGV
>Mature_263_residues
TSVPGVVGSFLAGLLSFLSPCVLPLIPAYVSFISGESLGSIRAGAARLQVFLSSVFFVLGLTTVFVLFSIVFSGGVQLAG
AGVLTVLTRVAGVGVILLGLNTIFDVVPFLRVERRMHTTVRRVGVFRAYLFGLLFATGWTPCVGPILSSLLFYAASSGQL
LHAAGLLTVYALGLGLPFVFAGIFFGRAERVFAWVKSHMHAVKLASGMLIVFFGLLMLTSGLQALSRLFLRAGFALEEYS
TRGITPLRQIAALLAQWFLYQGV

Specific function: Could be involved in cytochrome c synthesis [H]

COG id: COG0785

COG function: function code O; Cytochrome c biogenesis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DsbD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003834 [H]

Pfam domain/function: PF02683 DsbD [H]

EC number: 1.8.1.8 [C]

Molecular weight: Translated: 28218; Mature: 28087

Theoretical pI: Translated: 11.29; Mature: 11.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TSVPGVVGSFLAGLLSFLSPCVLPLIPAYVSFISGESLGSIRAGAARLQVFLSSVFFVL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
GLTTVFVLFSIVFSGGVQLAGAGVLTVLTRVAGVGVILLGLNTIFDVVPFLRVERRMHTT
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRRVGVFRAYLFGLLFATGWTPCVGPILSSLLFYAASSGQLLHAAGLLTVYALGLGLPFV
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
FAGIFFGRAERVFAWVKSHMHAVKLASGMLIVFFGLLMLTSGLQALSRLFLRAGFALEEY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
STRGITPLRQIAALLAQWFLYQGV
CCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DsbGoxidized; DsbDreduced/thiol:disulfide reductase [C]

Specific reaction: DsbDreduced/thiol:disulfide reductase + DsbCoxidized = DsbDoxidized + DsbCreduced DsbGoxidized + DsbDreduced/thiol:disulfide reductase = DsbGreduced + DsbDoxidized [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]