Click here to switch to the map view.

The map label for this gene is 189025300

Identifier: 189025300

GI number: 189025300

Start: 72344

End: 72658

Strand: Direct

Name: 189025300

Synonym: TPASS_0066

Alternate gene names: NA

Gene position: 72344-72658 (Clockwise)

Preceding gene: 189025299

Following gene: 189025301

Centisome position: 6.35

GC content: 52.06

Gene sequence:

>315_bases
ATGCAGAGGGTGCTTGAGAGCGACACGCCGTACTTCGTTAAAGGTATACAGCGCCCTGTTTCCACTCTCTCCGATCGCGA
CCGGGCGCTGCTAAACAGGCGGGGCAATGCATACCTGAATGAGGGGAAGCTGCAGGAAGCGGCACGCGTTTTCATTACCA
CTGGTTACCACGATGGATTGACCAGGATTGGCGATGTGTATATGCGCAAGGCGGACGTGTTGACCGCACTGCGGTTTTAT
TATTTTGCTCGCAATGAGCAGAAAATGAGGCCCATCGTTTCAGCGCTCTCAGTGTTGATTCGATGTCTTATATAA

Upstream 100 bases:

>100_bases
GTGTACGGGCGCTCGGTAGTTGATTTTTACCGCAGGATAAAGCCGGTCTTGCGTAGAACTGAAACCCGTTGTAGGATCTT
GCTGTTTTTTGTGCGAGGGG

Downstream 100 bases:

>100_bases
TTTTGACGCCGGGGGGGGGTATGGGGCTTATGGGGTGCGAGTGTAGTGTTCCGCCTTTTGAAACGGTTGAAACGGGCAAA
CGGTCAGTGGATGCGGACAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MQRVLESDTPYFVKGIQRPVSTLSDRDRALLNRRGNAYLNEGKLQEAARVFITTGYHDGLTRIGDVYMRKADVLTALRFY
YFARNEQKMRPIVSALSVLIRCLI

Sequences:

>Translated_104_residues
MQRVLESDTPYFVKGIQRPVSTLSDRDRALLNRRGNAYLNEGKLQEAARVFITTGYHDGLTRIGDVYMRKADVLTALRFY
YFARNEQKMRPIVSALSVLIRCLI
>Mature_104_residues
MQRVLESDTPYFVKGIQRPVSTLSDRDRALLNRRGNAYLNEGKLQEAARVFITTGYHDGLTRIGDVYMRKADVLTALRFY
YFARNEQKMRPIVSALSVLIRCLI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y066_TREPA (O83105)

Other databases:

- EMBL:   AE000520
- PIR:   B71371
- RefSeq:   NP_218506.1
- ProteinModelPortal:   O83105
- IntAct:   O83105
- MINT:   MINT-6479076
- GeneID:   2611399
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0066
- NMPDR:   fig|243276.1.peg.65
- TIGR:   TP_0066
- HOGENOM:   HBG731729
- OMA:   YANRNEH
- ProtClustDB:   CLSK2459987
- BioCyc:   TPAL243276:TP_0066-MONOMER
- InterPro:   IPR011990
- Gene3D:   G3DSA:1.25.40.10

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12013; Mature: 12013

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRVLESDTPYFVKGIQRPVSTLSDRDRALLNRRGNAYLNEGKLQEAARVFITTGYHDGL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCHH
TRIGDVYMRKADVLTALRFYYFARNEQKMRPIVSALSVLIRCLI
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MQRVLESDTPYFVKGIQRPVSTLSDRDRALLNRRGNAYLNEGKLQEAARVFITTGYHDGL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCHH
TRIGDVYMRKADVLTALRFYYFARNEQKMRPIVSALSVLIRCLI
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876