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The map label for this gene is ssb

Identifier: 189025296

GI number: 189025296

Start: 70162

End: 70692

Strand: Reverse

Name: ssb

Synonym: TPASS_0062

Alternate gene names: 189025296

Gene position: 70692-70162 (Counterclockwise)

Preceding gene: 189025297

Following gene: 189025295

Centisome position: 6.2

GC content: 53.86

Gene sequence:

>531_bases
ATGGCAGACGTCAATCATGTAGTGCTCGTTGGTCGGCTTACGCGTGATGCGGAGCTCAAGTACACTTCTGCAGGTGGTGC
TCTGTGTCGTTTTTCTGTTGCTATCAATCGGCGCAGGAAAAGTGGTGATGATTGGGTTGAGGAAGTTAATTTCTTCGATA
TCGTTCTATGGGGACGCCAGGGCGAAGTCATCAGCCAGTATCTTATCAAAGGCAAGCAGGTAGCCGTCGAGGGGGAATTG
CGTCAAAGCCGTTGGGAGCAAGAGGGGCAGTCACGCAGCAAGGTAGAGATCTCTGCGACTAACGTTCAACTCCTCGGTTC
TGTCCTCGGTGGCGCTGCTCGTGCCGAGGACGGTGAGTTTTCTTCCTCGCGCGTTGCCGCCGAGTCGACCGCTGGTCGTG
TCCGCGGCACATCCTCAGATTCTAGGTCACCCACAGGCGATATCTTGGGTGAGAAAAGAGGACTGGACGCAACCTCGTCC
CTTGATGAGGCTGATTTTTCAAGTTCAGATCTGGACACCGTTCCATTTTAG

Upstream 100 bases:

>100_bases
AGTGTGAGCCGGGGAAGGTGCGCGAACTCGATCATAAGCTCAGATTGCGACACGACTTACTCACGCACTTGTTTGTGCGT
GTCGATTCCTGAGAGAAGAT

Downstream 100 bases:

>100_bases
GTCTCTTTCCCCACAAGGAGCATGCATAATGAATAAAAGTATGACCGAACCTGGCGTTCGCCTGGACCTCAGAAAGGAAT
TGGGCGTGCTAATTTTTCCA

Product: single-strand DNA binding protein Ssb

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MADVNHVVLVGRLTRDAELKYTSAGGALCRFSVAINRRRKSGDDWVEEVNFFDIVLWGRQGEVISQYLIKGKQVAVEGEL
RQSRWEQEGQSRSKVEISATNVQLLGSVLGGAARAEDGEFSSSRVAAESTAGRVRGTSSDSRSPTGDILGEKRGLDATSS
LDEADFSSSDLDTVPF

Sequences:

>Translated_176_residues
MADVNHVVLVGRLTRDAELKYTSAGGALCRFSVAINRRRKSGDDWVEEVNFFDIVLWGRQGEVISQYLIKGKQVAVEGEL
RQSRWEQEGQSRSKVEISATNVQLLGSVLGGAARAEDGEFSSSRVAAESTAGRVRGTSSDSRSPTGDILGEKRGLDATSS
LDEADFSSSDLDTVPF
>Mature_175_residues
ADVNHVVLVGRLTRDAELKYTSAGGALCRFSVAINRRRKSGDDWVEEVNFFDIVLWGRQGEVISQYLIKGKQVAVEGELR
QSRWEQEGQSRSKVEISATNVQLLGSVLGGAARAEDGEFSSSRVAAESTAGRVRGTSSDSRSPTGDILGEKRGLDATSSL
DEADFSSSDLDTVPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain

Homologues:

Organism=Escherichia coli, GI1790494, Length=118, Percent_Identity=38.9830508474576, Blast_Score=80, Evalue=8e-17,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): SSB_TREPA (O83101)

Other databases:

- EMBL:   AE000520
- PIR:   F71370
- RefSeq:   NP_218502.1
- ProteinModelPortal:   O83101
- SMR:   O83101
- IntAct:   O83101
- GeneID:   2611406
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0062
- NMPDR:   fig|243276.1.peg.61
- TIGR:   TP_0062
- HOGENOM:   HBG755544
- OMA:   QSGVEKF
- ProtClustDB:   CLSK218500
- BioCyc:   TPAL243276:TP_0062-MONOMER
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344
- Gene3D:   G3DSA:2.40.50.140
- PANTHER:   PTHR10302
- TIGRFAMs:   TIGR00621

Pfam domain/function: PF00436 SSB; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 19043; Mature: 18912

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADVNHVVLVGRLTRDAELKYTSAGGALCRFSVAINRRRKSGDDWVEEVNFFDIVLWGRQ
CCCCCEEEEEEECCCCCEEEEECCCCCEEEEHHHHHCCCCCCHHHHHHCCEEEEEEECCC
GEVISQYLIKGKQVAVEGELRQSRWEQEGQSRSKVEISATNVQLLGSVLGGAARAEDGEF
CHHHHHHHHCCCEEEEECHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCC
SSSRVAAESTAGRVRGTSSDSRSPTGDILGEKRGLDATSSLDEADFSSSDLDTVPF
CCCCCHHHCCCCCEECCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ADVNHVVLVGRLTRDAELKYTSAGGALCRFSVAINRRRKSGDDWVEEVNFFDIVLWGRQ
CCCCEEEEEEECCCCCEEEEECCCCCEEEEHHHHHCCCCCCHHHHHHCCEEEEEEECCC
GEVISQYLIKGKQVAVEGELRQSRWEQEGQSRSKVEISATNVQLLGSVLGGAARAEDGEF
CHHHHHHHHCCCEEEEECHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCC
SSSRVAAESTAGRVRGTSSDSRSPTGDILGEKRGLDATSSLDEADFSSSDLDTVPF
CCCCCHHHCCCCCEECCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876