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Identifier: 188990859

GI number:

Start: 1684084

End: 1687554

Strand: Reverse

Name: Not Available

Synonym: xccb100_1463

Alternate gene names: NA

Gene position: NA

Preceding gene: 188990860

Following gene: 188990858

Centisome position: NA

GC content: NA

Gene sequence:

>3471_bases
CTGATGCCGTCGCCTACCTTCCCTTCTCCGCCGCTGCCCAAGTCCGGCCAGCTCCGCGCCTACTGGCGCGCTCCGTCGTC
TCCGACGGCCCTGGCCTGGTCGATTGCACGCGCTGCCGAAGCGCATGCCGGCCCGGTGCTGGTGATTGCCCGCGACAACC
AGAGCGCGCATCAGATCGAAGCCGATCTGCACGCCCTGCTGGGTGACGCGTCCACGCTGCCAGTGGTGCCGTTTCCCGAT
TGGGAAACCCTGCCCTACGACCAGTTCAGCCCGCACCCGGAAATCATCAGCCAGCGCCTGGCGGCCCTGCATCGCCTGCC
CGGTCTGACCCGTGGCGTGGTGATCGTGCCGGTGCAGACCTTGCTGCAGCAGCTGGCGCCGCTGAGCTACATCGTCGGTG
GCAGCTTCGATCTCACGGTTGGCCAGCGCCTGGATCTGGACGCGGAAAAACGCCGCCTGGAAAGCGCCGGCTACCGCAAC
GTGCCGCAGGTGATGGATCCGGGCGATTTCGCAGTGCGCGGCGGCCTGCTGGACGTGTTTCCGATGGGCGCCGACACCCC
GTTGCGCATCGAGCTGCTGGACGAGGATATCGATTCCATCCGCGCCTTCGACCCGGAATCGCAGCGCTCGCTGGACAAGG
TGGATGCGGTCAAGATGCTGCCCGGCCGCGAAGTGCCGATGGACGATGCCAGCGTGGAGCGTGTGCTCGCCTGCCTGCGC
GAACGCTTCGATGTGGATACGCGGCGCAGCGCGCTGTATCAGGATCTGAAGTCCGGCATCGCACCGTCGGGCGTCGAGTA
TTACCTGCCGATGTTCTTCAGCAAGACCGCCACGCTGTTCGATTATCTGGACACGCGCGTGCTGCCGCTGATCGCCACCG
GCGTCTCCAATGCGGCCGATGCCTTCTGGCTGCAGGCGCAAAACCGCTACGAGCAGCGCCGCCACGATGTGGAACGCCCG
CTGCTGCCGCCCGATGAGCTGTACCAGTCACCGGATGCCTTGCGCGAGCGGCTCAACAAGCTGGCGCGCATCGAAGTGTG
GCCGGCCGACCATCCGCGTATCGACGAGGCCGCGCCGCTGGGCGACCAGCCGTTGCCGCCGCTGCCGGTCGCCGCCAAGG
ATGCGCCCGCCGGGCAGGCCCTGGCCTCGTTCCTGGGCCATTACCCGGGCCGGGTGCTGGTGGCCGCCGATTCGGCCGGC
CGCCGCGAAGCCTTGATGGAAGTGCTGGCCGCCGCGCAGTTGAAGCCGGACGTCGTGGCCGACCTGCCCGCGTTCCTGGC
CGCGACCAAACTGCGCTTCGGCATCACCGTGGCGCCGCTGGAAGACGGCTTTGCATTGGACACGCCGCAGATTGCGGTGC
TGACCGAGCGCCAGTTGTTCCCGGAGCGGGCCAACCAACCGCGCCGCACGCGCCGTGTGGGCCGCGAGCCGGAAGCGATC
ATCCGCGACCTGGGCGAGCTCTCCGAAGGCGCGCCGATCGTGCATGAAGACCACGGCGTGGGCCGCTACCGCGGCCTCAT
CGTGCTCGACGCCGGCGGCATGCCTGGCGAGTTTCTGGAAATCGAATACGCCAAGGGCGACCGGCTGTATGTGCCGGTAG
CGCAGCTGCACCTGATCAGCCGCTATTCCGGTGCCTCGGCCGACACCGCGCCGCTGCATTCGCTGGGTGGCGAGCAGTGG
ACCAAGGCCAAGCGCAAGGCCGCGGAAAAGGTGCGCGATGTCGCCGCCGAATTGCTGGAAATCCAGGCGCGCCGCCGCGC
GCGCGCAGGCCTGGCCCTGCAGGTGGACCGCGCGATGTACGAACCATTCGCGGCGGGCTTTCCGTTCGAGGAAACCACCG
ACCAGTTGGCCGCGATCGATGCCACCTTGCGCGATCTGGGCAGCAGCCAGCCGATGGACCGCGTGGTCTGCGGCGATGTC
GGCTTCGGCAAGACCGAGGTCGCGGTGCGCGCCGCGTTCGCCGCGGCCAGTGCCGGCAAGCAGGTCGCCGTGCTGGTGCC
GACCACGCTGCTGGCCGAACAGCATTACCGCAACTTCCGCGACCGCTTCGCCGACTACCCGATGAAGGTGGAAGTGCTGT
CGCGCTTCAAGAGCACCAAGGAGATCAAGGCCGAGCTGGAAAAAGTGGCCAGCGGCGATATCGACGTGATCATCGGCACG
CACCGGCTGCTGCAGCCGGACGTGAAGTTCAAGGATCTCGGCCTGGTCGTGGTCGACGAAGAACAGCGCTTCGGCGTGCG
TCAGAAAGAAGCGCTCAAGGCGATGCGCGCCAACGTGCATCTGCTTACGCTCACCGCCACACCGATCCCGCGCACGCTCA
ACATGGCCATGGCCGGGCTGCGCGATCTGTCCATCATCGCTACGCCGCCGCCGAACCGGCTCGCGGTGCAGACCTTCATC
ACCGCCTGGGACAACACCCTGCTGCGCGAGGCGTTCCAGCGCGAACTCAGCCGCGGTGGCCAGCTGTATTTCCTGCACAA
CGATGTGGAAAGCATCGTGCGCATGCAGCGCGACCTGTCCGAGCTGGTGCCGGAAGCGCGCATCGGCATCGCGCATGGGC
AAATGCCCGAGCGCGAGCTGGAACGGGTGATGCTGGATTTCCAGAAGCAGCGCTTCAACGTGCTGCTGTCGACCACGATC
ATCGAATCGGGCATCGACATTCCCAACGCCAACACCATCATCATCAACCGCGCAGACCGCTTTGGTCTTGCGCAGTTGCA
TCAGCTGCGCGGCCGCGTGGGGCGTTCCCACCACCGCGCCTATGCGTATCTGGTGGTGCCGGACCGCCGCTCGATGACCT
CCGATGCAGAAAAGCGCCTGGAAGCGATTGCCTCCATGGACGAGTTGGGCGCCGGCTTCACCCTGGCCACGCATGATCTG
GAGATCCGTGGTGCCGGCGAGCTGCTGGGCGAGGACCAGAGCGGGCAGATGGCCGAGGTGGGTTTCAGCCTGTACACCGA
ACTGCTGGAACGCGCGGTGCGCAGCATCCGCCAGGGCAAGCTGCCCGACCTGGATGCCGGCGAAGAAGTGCGCGGCGCCG
AGGTGGAACTGCACGTGGCCTCGCTGATTCCCGAGGACTACCTGCCGGATGTACACACGCGCCTGACGCTGTACAAGCGC
ATTTCCAGTGCCCGCGACAGCGATGCCTTGCGCGAGTTGCAGGTGGAAATGATCGACCGCTTCGGCCTGCTGCCGGACCC
GGTCAAGCACCTGTTCGCGATCGCCGAGCTCAAGTTGCAGGCCAATGCCTTGGGCGTGCGCAAGCTGGATCTTGGCGAGA
ATGGCGGCCGGCTGGTGTTCGAGGCAAAGCCGTCGATCGACCCGATGACCGTGATCCAGATGATCCAGAAGCAGCCGAAG
ATCTACACCATGGACGGCCCGGACAAACTGCGCATCAAGCTGCCGTTGCCCGAGGCTGCCGACCGCTTCAAGGCGGCACG
TGGGCTGTTGACGGCCCTGGCACCGCGCTGA

Upstream 100 bases:

>100_bases
CCGCCCTCCCCATCGCACGACGCCGAAGCCCGGCGGGCCAGGCCGGCCGCTTTCACGCCAGATGGACCGGCCCCTGGCGG
CGCTCTGATAAAATCGCCGG

Downstream 100 bases:

>100_bases
GGGGTTGCACCGTGCAATGCGCCCTGCTGGGGCGCACTGCACGGGCACGCTGCAGCTGTGGTGTTGAAGGCCGCGCACGC
ACTGTGCAACGCGCCGACGG

Product: Transcription-repair coupling factor (TRCF).

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1156_residues
MMPSPTFPSPPLPKSGQLRAYWRAPSSPTALAWSIARAAEAHAGPVLVIARDNQSAHQIEADLHALLGDASTLPVVPFPD
WETLPYDQFSPHPEIISQRLAALHRLPGLTRGVVIVPVQTLLQQLAPLSYIVGGSFDLTVGQRLDLDAEKRRLESAGYRN
VPQVMDPGDFAVRGGLLDVFPMGADTPLRIELLDEDIDSIRAFDPESQRSLDKVDAVKMLPGREVPMDDASVERVLACLR
ERFDVDTRRSALYQDLKSGIAPSGVEYYLPMFFSKTATLFDYLDTRVLPLIATGVSNAADAFWLQAQNRYEQRRHDVERP
LLPPDELYQSPDALRERLNKLARIEVWPADHPRIDEAAPLGDQPLPPLPVAAKDAPAGQALASFLGHYPGRVLVAADSAG
RREALMEVLAAAQLKPDVVADLPAFLAATKLRFGITVAPLEDGFALDTPQIAVLTERQLFPERANQPRRTRRVGREPEAI
IRDLGELSEGAPIVHEDHGVGRYRGLIVLDAGGMPGEFLEIEYAKGDRLYVPVAQLHLISRYSGASADTAPLHSLGGEQW
TKAKRKAAEKVRDVAAELLEIQARRRARAGLALQVDRAMYEPFAAGFPFEETTDQLAAIDATLRDLGSSQPMDRVVCGDV
GFGKTEVAVRAAFAAASAGKQVAVLVPTTLLAEQHYRNFRDRFADYPMKVEVLSRFKSTKEIKAELEKVASGDIDVIIGT
HRLLQPDVKFKDLGLVVVDEEQRFGVRQKEALKAMRANVHLLTLTATPIPRTLNMAMAGLRDLSIIATPPPNRLAVQTFI
TAWDNTLLREAFQRELSRGGQLYFLHNDVESIVRMQRDLSELVPEARIGIAHGQMPERELERVMLDFQKQRFNVLLSTTI
IESGIDIPNANTIIINRADRFGLAQLHQLRGRVGRSHHRAYAYLVVPDRRSMTSDAEKRLEAIASMDELGAGFTLATHDL
EIRGAGELLGEDQSGQMAEVGFSLYTELLERAVRSIRQGKLPDLDAGEEVRGAEVELHVASLIPEDYLPDVHTRLTLYKR
ISSARDSDALRELQVEMIDRFGLLPDPVKHLFAIAELKLQANALGVRKLDLGENGGRLVFEAKPSIDPMTVIQMIQKQPK
IYTMDGPDKLRIKLPLPEAADRFKAARGLLTALAPR

Sequences:
NA

Specific function: NA

COG id: COG1197

COG function: function code LK; Transcription-repair coupling factor (superfamily II helicase)

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA