| Definition | Xanthomonas campestris pv. campestris str. B100, complete genome. |
|---|---|
| Accession | NC_010688 |
| Length | 5,079,002 |
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The map label for this gene is hsdR
Identifier: 188990644
GI number:
Start: 1438913
End: 1442203
Strand: Reverse
Name: hsdR
Synonym: xccb100_1248
Alternate gene names: NA
Gene position: NA
Preceding gene: 188990645
Following gene: 188990643
Centisome position: NA
GC content: NA
Gene sequence:
>3291_bases ATGACCCACAGCGCCCCGGACACCCGCGAACAGGCCAGCGCGCAGCTGCCCGCATTGCACCTGCTATGCAACCTGGGCTG GCGCTACCTGAGCAGTGCGCACTGCCTGGCGCTGCGCGGCAGCACCCGCGAGGTGCTGTTGCTGCCGCGTCTGATTGAGA CGTTGCAGAGCCGTCGCTTCGACTACAAGGGGCAGACCTACCCGCTCTCGCCGAGCGGCATCGACCAGATCGTGCGCGAG CTGTCGGCGCTGCCGCTGGGCGATGGGCTACTGGCCGCCAATGAGCGGCTGTATCAACTGCTGACGCTGGGCATCACCGT CACCGAGTTCATGCCCGACGGCAAGAAGCACCAGCCCACCATCGCGGTGATCGACTGGGGCGATGCAGCTCACAACTTGT GGGATATCACCGAAGAATGCGAGGTGCTCTCCACCCAGGGCACGCATACGCGCACGCCCGATATCGTGGGTTACGTCAAC GGCATCCCGCTGGTGGTGATCGAAACCAAACGCGCCGATGCCGGGCATGCTGGCAAATCGATGGTGGCCGAAGCGGTGAG CCAGCAATTGCGCAACCAGCGGGCAGAAGAGATTCCGCAGTTGTTCGCCTATGCGCAGTTGTTGGTTGCCATCAGCCTGA CCGAGGCGCGCTACGGCACCACGCACACCCCGGCCAAATTCTGGGCGCGTTGGCGCGACGAGCAGTTCGACCAGGCGCAG CTGCGCCGCCTCAAGAACCTGCCACTGCCTGCGGCTACCCGCGATGCCCTGCTGGCAGGCAAGCCGGCGCCGCTGCGGGC CTACTGCCAGGCGTTGTGGGCCAAGCCCATGCTGCCCACCGAGCAGGACCTGCTGTTGGCCGGGTTGCTCACCCCGGCCC GGCTGCTGGAGGTGCTGCGCGGTTTTGTGCTGTTCGACCGCAAGGTCGGCAAGATCGTGGCGCGCTACCAGCAGTTCTTC GGCATCCGCGCATTGCTGGCGCAGATCCGCACGCATCGCCCCGACGGCGGACGCCAGGGCGGCGTGCTGTGGCACACCAC CGGCTCGGGCAAGAGCTTCACCATGGTGTTTCTGACCAAGGCGCTGGTGCTGGATACGGCCTTGACGCAGTGCCGGGTGC TGGTGGTGACCGACCGTACCGATCTGGAGGCGCAGCTGTCGCGCAACTTCATCAGCGGCGGCGCGTTTGGCTCGGCCGTC GGCACCAAAAAAGAAGGTGAGCGCAGCAAGGCCACGACCGGCCGCGATCTGGCGCGCCGCATCGGCCAGGGCAGCGAGCG CATCACCTTCTCGCTGGTGCAGAAGTTCACTACCGCCGCCAAGCTGCCCGAGTGCCACAACGCCTCGGCCGATTTGATCG TGCTGGTGGATGAAGGCCACCGCAGCCACGGCGGCGAAACCCATGAGCGCATGCGCAAGGCGCTGCCCAATGCAGCCTAT CTGGCGTTCACCGGCACCCCGCTGCTCAAGAACGAGAAAGCCGCCAACAAGTTCGGCCCGATCCTGCATGCCTACACCAT GCAACGCGCAGTCGAAGACCAGACCGTGGCCCCGCTGCTGTACGAAGAACGCGTGCCGGAGCTGGAGGTCAACGCGGCGG CGGTCACGCGCTGGTTCGACAAGATCACCGCCGGGCTTTCGGACGCGCAGAGCGCGGATCTGAAAAAGAAGTTCGCCAGC AAGCGCGCTATTTATGGGGCGGCCAACCGCATCGAACTGATCGCCTGGGACATTGCCGCGCACTTCAACGAGAACATCAA ACCGTTGGGCCTGAAGGGGCAGCTGGCGACCGACAGCAAGCGCGACGCCATCCGCTACAAGCGCGCCCTGGACGAGACCG GCCTGGTGACAGGCGCGGTGGTGATCTCCCCGCCCGATACCCGCGAGGGCAACAGCGACGTTGATGAAGACACCCTGCCC GACGTACAGAAATGGTGGAAGCAGGCCATCACCGACCAACGGCTGGATCCGCACGAGTACGAGCGGCAGACCGTGCGCGA CTTCGGTGGCGATGGCGACCCAGACCTGCTCATCGTGGTGGACAAGCTGCTCACCGGCTTCGATGAGCCGCGCAATGCGG TGCTCTACATCGACAAGCCGCTCAAGGGCCACAACCTGATCCAGGCGGTGGCACGGGTGAACCGCCTGCACGACGCCAAG CGCTACGGCATCCTGGTGGACTATCGCGGTATCCTGACCGAACTGGACACGGCGGTACGCGCGTATCAGGACCTGGAAAC CCGTACCCAAGGCGGCTTCGATGTGGCCGATATCGAGGGCCTGTACCAGGCGATCAGTACCGAGTACAGACGCTTGCCCG CGCTCAATGCCAGGTTATGGGCATTCTTCGACGGGTTGGCCAGCCATGACGATCCGGAGCAGTTCAGGCAGCGCCTGAGC CCGCGCTTCGTCGCTGACGAAGAGGGCGCCGATTACGACGAGCGGCAGAAACTGCGCGACGACTTCTCCGCCGTGCTGAC CGAGTTCGGCCTGTGCCTGCAGACCGCACTCTCCTCGCGCAGCTTCTTTGAAGACGCTGCCTTTCCGGATGCATTGATCG ACCGCTACAAGCGCGACCTGCGTTTCTTCTCCGGGTTGCGCAGGACCGCACGCCAGGATGCGATGGAAACCGTGGACTAC AGCATCTACGAAAAGCAGATCCGCAAGCTGGTGGACAAACAGGTGATCGGCCGCGAGGTGCGTGAATCCTCCGGTGCTTA CGTCGTGCACGAATTGGGCAAGCGCGAAGATCCGCAGACCTGGTCGGAAGAGAAGACCCGCAACGAGGCCGATCTGATCC AGACGCGTCTGCGCAAGACCATCGAACAGGAGTTGGCCAGCGACCCGTACGCGCAAAAAGTCTTTGGCGAGCTGTTGCGT GAGGCCATTGCCGAGGCAGAAGCCATGTTCGACCACCCGTTGAAGCAGTACGCCGTGTTCAAGGCGTTCGAGCAGCGCCT CGAGGCCAGGCAGATCCCCAGTATTCCGGTGGCATTGGCCGATAACCCGCATGCCAGTGCCTACTACGGCGCGATCCTGC TGGAATTGGGCGAGGATGCCATGCACGCCAAGAGTGCTGCAGAGACAGCGCATCTGGCCGATCTGGCACTGACGATCGAT GGCGTGGTGCGCACCGCCATGGCCGAGAACTCGTTGAACCTGCACAGCATCGAGTCACAGATTCGCCAGACATTGCTTCC GCCCATCTTCGATCTGGTCGGGCTGGACCATGCCAAGGCCATCGTGGAGCAGGTCGTGCACATCACGCGCATTGGGCTCA GCCGCACGTGA
Upstream 100 bases:
>100_bases ATCAGCTTGCTCGACTCAAGGCGGAAAAAGTCATTCTGATGTCCCAACTCCTCACCGGCAAACGCCGCGTGCGCCTGCCC ACCGACGAAGCCGCACACGC
Downstream 100 bases:
>100_bases CACCAGGTCAGACCGACGCCGAGATGGTGGTGACCTACGGCGAGCGCCGCATCCACTGCCAGATCCGGCGATCCGCGCTA AGGCGCACCCAACGCGTGGC
Product: type I site-specific deoxyribonuclease
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1096_residues MTHSAPDTREQASAQLPALHLLCNLGWRYLSSAHCLALRGSTREVLLLPRLIETLQSRRFDYKGQTYPLSPSGIDQIVRE LSALPLGDGLLAANERLYQLLTLGITVTEFMPDGKKHQPTIAVIDWGDAAHNLWDITEECEVLSTQGTHTRTPDIVGYVN GIPLVVIETKRADAGHAGKSMVAEAVSQQLRNQRAEEIPQLFAYAQLLVAISLTEARYGTTHTPAKFWARWRDEQFDQAQ LRRLKNLPLPAATRDALLAGKPAPLRAYCQALWAKPMLPTEQDLLLAGLLTPARLLEVLRGFVLFDRKVGKIVARYQQFF GIRALLAQIRTHRPDGGRQGGVLWHTTGSGKSFTMVFLTKALVLDTALTQCRVLVVTDRTDLEAQLSRNFISGGAFGSAV GTKKEGERSKATTGRDLARRIGQGSERITFSLVQKFTTAAKLPECHNASADLIVLVDEGHRSHGGETHERMRKALPNAAY LAFTGTPLLKNEKAANKFGPILHAYTMQRAVEDQTVAPLLYEERVPELEVNAAAVTRWFDKITAGLSDAQSADLKKKFAS KRAIYGAANRIELIAWDIAAHFNENIKPLGLKGQLATDSKRDAIRYKRALDETGLVTGAVVISPPDTREGNSDVDEDTLP DVQKWWKQAITDQRLDPHEYERQTVRDFGGDGDPDLLIVVDKLLTGFDEPRNAVLYIDKPLKGHNLIQAVARVNRLHDAK RYGILVDYRGILTELDTAVRAYQDLETRTQGGFDVADIEGLYQAISTEYRRLPALNARLWAFFDGLASHDDPEQFRQRLS PRFVADEEGADYDERQKLRDDFSAVLTEFGLCLQTALSSRSFFEDAAFPDALIDRYKRDLRFFSGLRRTARQDAMETVDY SIYEKQIRKLVDKQVIGREVRESSGAYVVHELGKREDPQTWSEEKTRNEADLIQTRLRKTIEQELASDPYAQKVFGELLR EAIAEAEAMFDHPLKQYAVFKAFEQRLEARQIPSIPVALADNPHASAYYGAILLELGEDAMHAKSAAETAHLADLALTID GVVRTAMAENSLNLHSIESQIRQTLLPPIFDLVGLDHAKAIVEQVVHITRIGLSRT
Sequences:
NA
Specific function: NA
COG id: COG0610
COG function: function code V; Type I site-specific restriction-modification system, R (restriction) subunit and related helicases
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA