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The map label for this gene is 188587420

Identifier: 188587420

GI number: 188587420

Start: 3062159

End: 3063553

Strand: Direct

Name: 188587420

Synonym: Nther_2830

Alternate gene names: NA

Gene position: 3062159-3063553 (Clockwise)

Preceding gene: 188587419

Following gene: 188587421

Centisome position: 96.73

GC content: 34.34

Gene sequence:

>1395_bases
TTGTTAAAAAAGTATCTAATTTATGTGTCAATGTTCTTTGAAAATGTCACTATGACTAAAAAGGTGACATATCAAATGAC
CCAAGAAGAAATTAAAAAACTAAATATTATCAATCAAACAATTGATGGCTACTTAACCATTAGAGATGCAGCACGAGCTT
TGAACCTCAGTGATCGACAAATTAAACGACTGAAGAAAGGAGTGCAACTAGAAGGACCCAGTTTTGTCATACATAAAAGC
CGAGGTAAAAAGCCTGATCATTCTGTTCCTGAAAGTACTGAAAAACATATCATTTCTCTAAAGTTAGAAAAATACCCAAA
TGCAAATTTCACTCATTTTACAGAACTTTTAAACGAGCGAGAAAAAATCTCTATCAGTAGGCCAGTTGTTCATAGAATTC
TTAGTAAAGCTGGAATTTCTAGTCCTAAAAAACATAAAAAGAGTAAGAGTCACCACAGACGCAAACGCAAGGACAGAATG
GGACTTTTAGTACAAATAGACGCCTCACCTTATGACTGGTTTGACACTGGCTTTGATTGTGATTTACACGCTGCTATCGA
TGATGCCACAGGAGCTTTGCTAGGATTATTTTTTGTTGAAAATGAATGTCTTGAGGGATACTTTCAGATTATGCATCAGT
TAATTTCAAACTATGGTATTCCTGCAAGTCTTTATAGCGATAAGCACACTATTTTTAGATCACCTAAATCGGACAAGCTT
TCGATTGATGAACAGCTCGCAGGTAAACAAGTTAAGCCTACTCAATTTGGTGCAGCTATGGAAGAGTTAGGAGTCACTAT
TATACCTGCTAACTCTCCACAAGCAAAAGGACGAGTTGAAAGGCTTTTTGATACTTTACAAAGCAGACTGCCCACACTTT
TTAAGCTACACAATATAACTACCATGGAGAAAGCTAATGAATTTTTACAAAAAGATTTCTTGCCTGATTTTAATAAAAGA
TTTGCCCTAAAGCCCGAAAATGAGCTATCGGCTTTTACCTGTTTAAATCAAGATATTAATCTTGATCATATACTTTGTTC
TAAATTCAAAAGAACTGTGGACAACAGTGCCACTTTCTCTTTTGAAGGAAGTTACTATCAAATTTTAGATAAAAATAGTC
AACTGGTTCCTAAATCTAAAGTTACTGTCCTATCTAATCCTAAATTTGGAGTTAAAGTAAAATATAAAGATATGGTGTTT
GAAACTCAAATTGTGGACAAGCCTTCAACTACTAAAATGACCAAAAAAGTTAAAACAACGCAATCACCTAAAAATAGAAT
AGTCCCAGATGAAAATCACCCTTGGAGAAAACAAAGTGAAAGAACAAATCTTAACTACGACCTGACTGATCAAGAACTTT
TAGATACTATACTAAATACCAGGGACCGAGTTTAA

Upstream 100 bases:

>100_bases
TCCAAAATTTTGACCTAAGTCCACCTCCTTTAACTAAGGTCACCTTTATTAAGTTTTTTTATGTTGGTATTGTCTAACTG
TTTAGTAAGGATATTCAATA

Downstream 100 bases:

>100_bases
AACTCGGTCTACCTTCCTGGGGGGTGACATTTTCTCTGAACAAATTTATGCGTTTTTAGGTGACATTTTCAAAGAACATT
GACATTTGACAATGTTAAGT

Product: Integrase catalytic region

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 464; Mature: 464

Protein sequence:

>464_residues
MLKKYLIYVSMFFENVTMTKKVTYQMTQEEIKKLNIINQTIDGYLTIRDAARALNLSDRQIKRLKKGVQLEGPSFVIHKS
RGKKPDHSVPESTEKHIISLKLEKYPNANFTHFTELLNEREKISISRPVVHRILSKAGISSPKKHKKSKSHHRRKRKDRM
GLLVQIDASPYDWFDTGFDCDLHAAIDDATGALLGLFFVENECLEGYFQIMHQLISNYGIPASLYSDKHTIFRSPKSDKL
SIDEQLAGKQVKPTQFGAAMEELGVTIIPANSPQAKGRVERLFDTLQSRLPTLFKLHNITTMEKANEFLQKDFLPDFNKR
FALKPENELSAFTCLNQDINLDHILCSKFKRTVDNSATFSFEGSYYQILDKNSQLVPKSKVTVLSNPKFGVKVKYKDMVF
ETQIVDKPSTTKMTKKVKTTQSPKNRIVPDENHPWRKQSERTNLNYDLTDQELLDTILNTRDRV

Sequences:

>Translated_464_residues
MLKKYLIYVSMFFENVTMTKKVTYQMTQEEIKKLNIINQTIDGYLTIRDAARALNLSDRQIKRLKKGVQLEGPSFVIHKS
RGKKPDHSVPESTEKHIISLKLEKYPNANFTHFTELLNEREKISISRPVVHRILSKAGISSPKKHKKSKSHHRRKRKDRM
GLLVQIDASPYDWFDTGFDCDLHAAIDDATGALLGLFFVENECLEGYFQIMHQLISNYGIPASLYSDKHTIFRSPKSDKL
SIDEQLAGKQVKPTQFGAAMEELGVTIIPANSPQAKGRVERLFDTLQSRLPTLFKLHNITTMEKANEFLQKDFLPDFNKR
FALKPENELSAFTCLNQDINLDHILCSKFKRTVDNSATFSFEGSYYQILDKNSQLVPKSKVTVLSNPKFGVKVKYKDMVF
ETQIVDKPSTTKMTKKVKTTQSPKNRIVPDENHPWRKQSERTNLNYDLTDQELLDTILNTRDRV
>Mature_464_residues
MLKKYLIYVSMFFENVTMTKKVTYQMTQEEIKKLNIINQTIDGYLTIRDAARALNLSDRQIKRLKKGVQLEGPSFVIHKS
RGKKPDHSVPESTEKHIISLKLEKYPNANFTHFTELLNEREKISISRPVVHRILSKAGISSPKKHKKSKSHHRRKRKDRM
GLLVQIDASPYDWFDTGFDCDLHAAIDDATGALLGLFFVENECLEGYFQIMHQLISNYGIPASLYSDKHTIFRSPKSDKL
SIDEQLAGKQVKPTQFGAAMEELGVTIIPANSPQAKGRVERLFDTLQSRLPTLFKLHNITTMEKANEFLQKDFLPDFNKR
FALKPENELSAFTCLNQDINLDHILCSKFKRTVDNSATFSFEGSYYQILDKNSQLVPKSKVTVLSNPKFGVKVKYKDMVF
ETQIVDKPSTTKMTKKVKTTQSPKNRIVPDENHPWRKQSERTNLNYDLTDQELLDTILNTRDRV

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 53435; Mature: 53435

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKYLIYVSMFFENVTMTKKVTYQMTQEEIKKLNIINQTIDGYLTIRDAARALNLSDRQ
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHCCCCHHH
IKRLKKGVQLEGPSFVIHKSRGKKPDHSVPESTEKHIISLKLEKYPNANFTHFTELLNER
HHHHHCCCEECCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHCHH
EKISISRPVVHRILSKAGISSPKKHKKSKSHHRRKRKDRMGLLVQIDASPYDWFDTGFDC
HHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCC
DLHAAIDDATGALLGLFFVENECLEGYFQIMHQLISNYGIPASLYSDKHTIFRSPKSDKL
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHEECCCCCCCC
SIDEQLAGKQVKPTQFGAAMEELGVTIIPANSPQAKGRVERLFDTLQSRLPTLFKLHNIT
CCHHHHCCCCCCCHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHCCH
TMEKANEFLQKDFLPDFNKRFALKPENELSAFTCLNQDINLDHILCSKFKRTVDNSATFS
HHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEE
FEGSYYQILDKNSQLVPKSKVTVLSNPKFGVKVKYKDMVFETQIVDKPSTTKMTKKVKTT
ECCCEEEEECCCCCCCCCCCEEEEECCCCCEEEEEHHHEEEEHCCCCCCHHHHHHHHHHC
QSPKNRIVPDENHPWRKQSERTNLNYDLTDQELLDTILNTRDRV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLKKYLIYVSMFFENVTMTKKVTYQMTQEEIKKLNIINQTIDGYLTIRDAARALNLSDRQ
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHCCCCHHH
IKRLKKGVQLEGPSFVIHKSRGKKPDHSVPESTEKHIISLKLEKYPNANFTHFTELLNER
HHHHHCCCEECCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHCHH
EKISISRPVVHRILSKAGISSPKKHKKSKSHHRRKRKDRMGLLVQIDASPYDWFDTGFDC
HHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCC
DLHAAIDDATGALLGLFFVENECLEGYFQIMHQLISNYGIPASLYSDKHTIFRSPKSDKL
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHEECCCCCCCC
SIDEQLAGKQVKPTQFGAAMEELGVTIIPANSPQAKGRVERLFDTLQSRLPTLFKLHNIT
CCHHHHCCCCCCCHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHCCH
TMEKANEFLQKDFLPDFNKRFALKPENELSAFTCLNQDINLDHILCSKFKRTVDNSATFS
HHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEE
FEGSYYQILDKNSQLVPKSKVTVLSNPKFGVKVKYKDMVFETQIVDKPSTTKMTKKVKTT
ECCCEEEEECCCCCCCCCCCEEEEECCCCCEEEEEHHHEEEEHCCCCCCHHHHHHHHHHC
QSPKNRIVPDENHPWRKQSERTNLNYDLTDQELLDTILNTRDRV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8021229 [H]