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The map label for this gene is yqjN [H]

Identifier: 188587383

GI number: 188587383

Start: 3016797

End: 3018473

Strand: Direct

Name: yqjN [H]

Synonym: Nther_2792

Alternate gene names: 188587383

Gene position: 3016797-3018473 (Clockwise)

Preceding gene: 188587376

Following gene: 188587393

Centisome position: 95.3

GC content: 35.36

Gene sequence:

>1677_bases
ATGTGGCTGAATGATGAGACAAAATTAAAAGAGATTCTCAATCGGCTGGTAAATGTCCCTAGCGTTTCAGGAACCACAAA
GGAACGAGGTATGGCAGAAGAAGTTTATAATATAATGTCCGAAATACCATATTTTCAAGAAAATCAGGAATTACTAAACT
TAAAAAAACTGCCTTATGATGATTTAGACAGATATTATGTCACTGCATTACTTAAAGGTAAGGGAAGTAAGACTGTTATT
TTACTACATCATCACGATGTAGTTGATATCGAAGATTTCGGTAGTCTTCGTGAATATGCTTTTAATCCTGAAAAAATCAC
AGAAAAAATGGCAGATTTTGATTTGCCAGAAGAAGCTAGAAAGGATTTAGAAACTGGCGAATGGCTTTTTGGACGCGGAG
TTATGGATATGAAATCAGGAGCTGCTCTTCAAATTGCATTGATGCATGATTATTCCCATAAAATTAATGAGTTTGACGGA
AACATTGTCCTGGTGTCAGTTCCTGACGAAGAAAATAATTCTGAAGGTATTTTATCGGCTGTGCCACATTTAGTAGAACT
AAGAGACAAGCATGATTTAGAATACATTTCTGTAATCAAAAGTGAGAGTCATCAACCTGATTCTGAGGGAAAAAATGATA
TAGCAATCGGAAGTATCGGAAAGATTCTTCCATTATTCTATTGCTTTGGAAAAGAGACCCATGCCGGAAATCCTTTCGGT
GGATTAAATTCAAGTCTGATATTCTCACAAGTAGAAGCTTTAATGGAAAAAAGTCCGGAATTTTGTGATGAATTCAAAGG
AGAGTTAACTCCTCCCCCTGTTAATTTAAAATTAAATGACCTGCGAGGAGTTTACAATGTCACTACACCTCAAGTAACTA
TAGGATATTATAATGTTATGACCATTAATTCTAGTCCCTATGATGTCCTAGAAAAAATGAAATCTATTGCTAAGCAAGCC
TTAGATAATTCCATCGAAATTTACAATCAACGTTATGATGGATTTCAAAATCTAGCCCCCGATGGTGTGGAAAACTCTTG
GGGTGTTAGTGAAAAAGCTAGTCTCAACTGGGAACCAAAAGTCTATACCTTTGAGGAGCTTTATAATTCTGCCTATAAGG
CCTGGGGAGATGACTTTTTAAATGATTATAACGAAACTGCCGAACAACTTAAAGAATCAGTAAAAGATGAGCGGGAATAT
TCGATTCACTTGGTTAACAAGGCCCATGATTACTGCCCGGACAGAAATCCCAAGATAGTTTTAGCCTTTTTACCTCCTTT
CTATCCTCATGTTAAAAATAATAGAGAAACAGAAAAAGAACAATTTATTCTAGATGTGGTTGAAAATATCAAAAAGGAAA
CTAGAGAAAAATTTGGATTAGAGTACAAGGTTACCGAGTTTTTCAAAGGTATAAGTGATTTAAGTTTCTTTTACGTACCT
GAAAGTGAAGATATTGCCAATTACATGAACCCCAATATGCCAGCCCTCAACCGTGTTTATAGATTACCTATTGAAGACAT
AAGTAAACTCGATGTTTCAGTTGTAAATGTGGGTCCTGTTGGAAAAGATGCTCATCAATATACTGAAAGATTATATCTAC
CCTTCTTTACTCAAAAGGCGCCACAAATTTTAGAAATTGCCGTTAATGAAGTTTTGAACTACAATACCAAGCAATAG

Upstream 100 bases:

>100_bases
TGGAAAATTTTAACTAGAAGGTTTAATTATAAAGAATTTTTTGATAATATTTAGTTAGTGGAGTAACAATATTTTGAATT
TTTAACCGGGAGGGGTTATT

Downstream 100 bases:

>100_bases
TAAATTCAATAATCCAATAAATCTAAATTTTCAAAAACCATAAATTGAATAACTGCCAACTGTCCAAAAGAAAACCGGAG
GCCTATCGCGCCTCCGGCTT

Product: peptidase M20

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 558; Mature: 558

Protein sequence:

>558_residues
MWLNDETKLKEILNRLVNVPSVSGTTKERGMAEEVYNIMSEIPYFQENQELLNLKKLPYDDLDRYYVTALLKGKGSKTVI
LLHHHDVVDIEDFGSLREYAFNPEKITEKMADFDLPEEARKDLETGEWLFGRGVMDMKSGAALQIALMHDYSHKINEFDG
NIVLVSVPDEENNSEGILSAVPHLVELRDKHDLEYISVIKSESHQPDSEGKNDIAIGSIGKILPLFYCFGKETHAGNPFG
GLNSSLIFSQVEALMEKSPEFCDEFKGELTPPPVNLKLNDLRGVYNVTTPQVTIGYYNVMTINSSPYDVLEKMKSIAKQA
LDNSIEIYNQRYDGFQNLAPDGVENSWGVSEKASLNWEPKVYTFEELYNSAYKAWGDDFLNDYNETAEQLKESVKDEREY
SIHLVNKAHDYCPDRNPKIVLAFLPPFYPHVKNNRETEKEQFILDVVENIKKETREKFGLEYKVTEFFKGISDLSFFYVP
ESEDIANYMNPNMPALNRVYRLPIEDISKLDVSVVNVGPVGKDAHQYTERLYLPFFTQKAPQILEIAVNEVLNYNTKQ

Sequences:

>Translated_558_residues
MWLNDETKLKEILNRLVNVPSVSGTTKERGMAEEVYNIMSEIPYFQENQELLNLKKLPYDDLDRYYVTALLKGKGSKTVI
LLHHHDVVDIEDFGSLREYAFNPEKITEKMADFDLPEEARKDLETGEWLFGRGVMDMKSGAALQIALMHDYSHKINEFDG
NIVLVSVPDEENNSEGILSAVPHLVELRDKHDLEYISVIKSESHQPDSEGKNDIAIGSIGKILPLFYCFGKETHAGNPFG
GLNSSLIFSQVEALMEKSPEFCDEFKGELTPPPVNLKLNDLRGVYNVTTPQVTIGYYNVMTINSSPYDVLEKMKSIAKQA
LDNSIEIYNQRYDGFQNLAPDGVENSWGVSEKASLNWEPKVYTFEELYNSAYKAWGDDFLNDYNETAEQLKESVKDEREY
SIHLVNKAHDYCPDRNPKIVLAFLPPFYPHVKNNRETEKEQFILDVVENIKKETREKFGLEYKVTEFFKGISDLSFFYVP
ESEDIANYMNPNMPALNRVYRLPIEDISKLDVSVVNVGPVGKDAHQYTERLYLPFFTQKAPQILEIAVNEVLNYNTKQ
>Mature_558_residues
MWLNDETKLKEILNRLVNVPSVSGTTKERGMAEEVYNIMSEIPYFQENQELLNLKKLPYDDLDRYYVTALLKGKGSKTVI
LLHHHDVVDIEDFGSLREYAFNPEKITEKMADFDLPEEARKDLETGEWLFGRGVMDMKSGAALQIALMHDYSHKINEFDG
NIVLVSVPDEENNSEGILSAVPHLVELRDKHDLEYISVIKSESHQPDSEGKNDIAIGSIGKILPLFYCFGKETHAGNPFG
GLNSSLIFSQVEALMEKSPEFCDEFKGELTPPPVNLKLNDLRGVYNVTTPQVTIGYYNVMTINSSPYDVLEKMKSIAKQA
LDNSIEIYNQRYDGFQNLAPDGVENSWGVSEKASLNWEPKVYTFEELYNSAYKAWGDDFLNDYNETAEQLKESVKDEREY
SIHLVNKAHDYCPDRNPKIVLAFLPPFYPHVKNNRETEKEQFILDVVENIKKETREKFGLEYKVTEFFKGISDLSFFYVP
ESEDIANYMNPNMPALNRVYRLPIEDISKLDVSVVNVGPVGKDAHQYTERLYLPFFTQKAPQILEIAVNEVLNYNTKQ

Specific function: Unknown

COG id: COG4187

COG function: function code E; Arginine degradation protein (predicted deacylase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis rocB [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002933
- InterPro:   IPR012166 [H]

Pfam domain/function: PF01546 Peptidase_M20 [H]

EC number: NA

Molecular weight: Translated: 63953; Mature: 63953

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWLNDETKLKEILNRLVNVPSVSGTTKERGMAEEVYNIMSEIPYFQENQELLNLKKLPYD
CCCCCHHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCH
DLDRYYVTALLKGKGSKTVILLHHHDVVDIEDFGSLREYAFNPEKITEKMADFDLPEEAR
HHHHHHHHHHHCCCCCCEEEEEECCCEECHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHH
KDLETGEWLFGRGVMDMKSGAALQIALMHDYSHKINEFDGNIVLVSVPDEENNSEGILSA
HCCCCCCEEECCCCCCCCCCCEEEEEEEECHHHHHHCCCCCEEEEECCCCCCCCCCHHHH
VPHLVELRDKHDLEYISVIKSESHQPDSEGKNDIAIGSIGKILPLFYCFGKETHAGNPFG
HHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCEECCCHHHHHHHHHHHCCCCCCCCCCC
GLNSSLIFSQVEALMEKSPEFCDEFKGELTPPPVNLKLNDLRGVYNVTTPQVTIGYYNVM
CCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCEEECCCCCEEECCCCEEEEEEEEEE
TINSSPYDVLEKMKSIAKQALDNSIEIYNQRYDGFQNLAPDGVENSWGVSEKASLNWEPK
EECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCC
VYTFEELYNSAYKAWGDDFLNDYNETAEQLKESVKDEREYSIHLVNKAHDYCPDRNPKIV
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHCCCCCCCEEE
LAFLPPFYPHVKNNRETEKEQFILDVVENIKKETREKFGLEYKVTEFFKGISDLSFFYVP
EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHCCHHCCEEEECC
ESEDIANYMNPNMPALNRVYRLPIEDISKLDVSVVNVGPVGKDAHQYTERLYLPFFTQKA
CCHHHHHHCCCCCCHHHHEEECCHHHHHHCCEEEEECCCCCCHHHHHHHHHCCCHHHCCC
PQILEIAVNEVLNYNTKQ
HHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MWLNDETKLKEILNRLVNVPSVSGTTKERGMAEEVYNIMSEIPYFQENQELLNLKKLPYD
CCCCCHHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCH
DLDRYYVTALLKGKGSKTVILLHHHDVVDIEDFGSLREYAFNPEKITEKMADFDLPEEAR
HHHHHHHHHHHCCCCCCEEEEEECCCEECHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHH
KDLETGEWLFGRGVMDMKSGAALQIALMHDYSHKINEFDGNIVLVSVPDEENNSEGILSA
HCCCCCCEEECCCCCCCCCCCEEEEEEEECHHHHHHCCCCCEEEEECCCCCCCCCCHHHH
VPHLVELRDKHDLEYISVIKSESHQPDSEGKNDIAIGSIGKILPLFYCFGKETHAGNPFG
HHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCEECCCHHHHHHHHHHHCCCCCCCCCCC
GLNSSLIFSQVEALMEKSPEFCDEFKGELTPPPVNLKLNDLRGVYNVTTPQVTIGYYNVM
CCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCEEECCCCCEEECCCCEEEEEEEEEE
TINSSPYDVLEKMKSIAKQALDNSIEIYNQRYDGFQNLAPDGVENSWGVSEKASLNWEPK
EECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCC
VYTFEELYNSAYKAWGDDFLNDYNETAEQLKESVKDEREYSIHLVNKAHDYCPDRNPKIV
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHCCCCCCCEEE
LAFLPPFYPHVKNNRETEKEQFILDVVENIKKETREKFGLEYKVTEFFKGISDLSFFYVP
EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHCCHHCCEEEECC
ESEDIANYMNPNMPALNRVYRLPIEDISKLDVSVVNVGPVGKDAHQYTERLYLPFFTQKA
CCHHHHHHCCCCCCHHHHEEECCHHHHHHCCEEEEECCCCCCHHHHHHHHHCCCHHHCCC
PQILEIAVNEVLNYNTKQ
HHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]