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The map label for this gene is yqjN [H]

Identifier: 188587375

GI number: 188587375

Start: 3007077

End: 3008744

Strand: Direct

Name: yqjN [H]

Synonym: Nther_2784

Alternate gene names: 188587375

Gene position: 3007077-3008744 (Clockwise)

Preceding gene: 188587370

Following gene: 188587376

Centisome position: 94.99

GC content: 34.89

Gene sequence:

>1668_bases
ATGTGGCTCGAGGACAAGAATAAATTAAAAGAATTACTAGATCGGTTAGTAAAAGTACCTAGTATATCAGGGACCAGTAA
AGAACAAGGTGTTGCAGAAGAAATTCATAAAATCTTATCAGAAATACCCTACTTCCAAGAAAATAAAGACCTACTTCATA
TTAATAAATTACCCGGCGATAGTTTAGAAAGATCCTACGTAACTGCCCTTTTAAAAGGTAAGGGCAATAAAACTGTTATT
TTACTTCATCATCACGATGTAGTTGATGTTCAAGATTATGGGAATTTAAAAGAATATGCCTTTGATACCGATACAATCAC
TAGTAAAATGGAAACTTTTGACCTACCATCAGACGCAAGAAAAGACCTAGAGAGCGGTGAATGGTTATTTGGACGTGGTG
TAATGGATATGAAAGCAGGAGCAGCATTACAACTAGCCCTAATGCACGATTACTCTCAAAATATAGAAGATTTTGATGGA
AACATTGTACTTGTGTCAGTACCAGATGAAGAAAATAACTCCATCGGAATACTATCAGCAGTTCCCCATTTAAATAAGCT
AAAAGAAGAACATAGTCTAGAATACAGATCTGTTATCAAAAGCGAAAGTCATCAACCTGATGATGAAGGAAATAGTGATA
TAGCTATCGGAAGTATTGGAAAGATCTTACCTTTCTTTTACTGCTTCGGAAAAGAAACTCACGGAGGTAATCCCTATGGA
GGACTTAATTCTAGTTTAATATTTTCTCAAGTAGAATCATTAATGGAATTCAATACCGATTTTTGTGACAAATTTAGAGG
AGAACTAACACCACCACCAGTTAATTTAAAGCTCAACGATTTACGAGGAGTATACAACGTAACAACTCCCCAAGTAACAG
TAGGGTATTATAATATCCTAACAATTACATCAAGCCCTTATGATATCTTGCAAAAAATGCAAAAAGTAGCAAAACAGGCC
TTAGATAATGCAATCAAGATTTATGATAACAGCTTTGACAGTTTTGAAGAGTTAGCAGGAGAGGATGGAATTGATAATTC
TTGGGGAACAAGTGAAAAAGTCAGCAAAAATTGGGATCCAAAAGTTTACACTTTTGATGAACTATACAATTCTGCTTATC
AGGCTTCGGGCGAACAATTCTTAGAAGCATATAATCAGGCTGCAAAAGAACTAAAAGAAACAGCTCAAGATGAGCGAGAG
TTCTCTCTTCAACTAGTAGATAAAGTACACGACTACTGTCCTGATAGAAATCCTAAAATAATTGTAGGTTTTCTGCCACC
TTTCTACCCCCATGTTAAGAACAACAGAGAAACGGACAAAGAAAATTATATGCTAGAAGTAGTAGAAAGACTACAACAAG
AAGGGAAAGATAAACATGGAATTCATTTTAATGTGACAGAGTTTTTCAAAGGTATCAGCGATCTAAGTTACTTCGCGGTA
CCCGAAAGTGAAGATATTGCTAAGTATATGAATCCCAATATGCCAGCTAATAACCATGTTTACAATCTACCAATTGAAGA
AATTAGTAAACTTGATGTATCAGTCATTAATGTAGGGCCCATGGGTAAAGATGCTCATCAATACACTGAACGACTGCATA
TGCCATTTTTCACTGAAAAAGCACCTAAAATTCTAGAATTTACTGTTAATGAAATACTAAAAAATTAA

Upstream 100 bases:

>100_bases
CTCAGTAATCTGAAATTTCCGTTTTGTCGGCATAATTATTGCATGTTTTTGATATATTAAATATTAAAATTTTTAAAATA
TTATAAGGAGGTATTATATA

Downstream 100 bases:

>100_bases
GTATAATCAATTAAACACTTAGGCCATCTGAAATCAGATGGCCTTATTCTTGTTCATCAATTCTCCTTAAATTTTTGTCG
CATTAGTTCATCATAAGTTC

Product: peptidase M20

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 555; Mature: 555

Protein sequence:

>555_residues
MWLEDKNKLKELLDRLVKVPSISGTSKEQGVAEEIHKILSEIPYFQENKDLLHINKLPGDSLERSYVTALLKGKGNKTVI
LLHHHDVVDVQDYGNLKEYAFDTDTITSKMETFDLPSDARKDLESGEWLFGRGVMDMKAGAALQLALMHDYSQNIEDFDG
NIVLVSVPDEENNSIGILSAVPHLNKLKEEHSLEYRSVIKSESHQPDDEGNSDIAIGSIGKILPFFYCFGKETHGGNPYG
GLNSSLIFSQVESLMEFNTDFCDKFRGELTPPPVNLKLNDLRGVYNVTTPQVTVGYYNILTITSSPYDILQKMQKVAKQA
LDNAIKIYDNSFDSFEELAGEDGIDNSWGTSEKVSKNWDPKVYTFDELYNSAYQASGEQFLEAYNQAAKELKETAQDERE
FSLQLVDKVHDYCPDRNPKIIVGFLPPFYPHVKNNRETDKENYMLEVVERLQQEGKDKHGIHFNVTEFFKGISDLSYFAV
PESEDIAKYMNPNMPANNHVYNLPIEEISKLDVSVINVGPMGKDAHQYTERLHMPFFTEKAPKILEFTVNEILKN

Sequences:

>Translated_555_residues
MWLEDKNKLKELLDRLVKVPSISGTSKEQGVAEEIHKILSEIPYFQENKDLLHINKLPGDSLERSYVTALLKGKGNKTVI
LLHHHDVVDVQDYGNLKEYAFDTDTITSKMETFDLPSDARKDLESGEWLFGRGVMDMKAGAALQLALMHDYSQNIEDFDG
NIVLVSVPDEENNSIGILSAVPHLNKLKEEHSLEYRSVIKSESHQPDDEGNSDIAIGSIGKILPFFYCFGKETHGGNPYG
GLNSSLIFSQVESLMEFNTDFCDKFRGELTPPPVNLKLNDLRGVYNVTTPQVTVGYYNILTITSSPYDILQKMQKVAKQA
LDNAIKIYDNSFDSFEELAGEDGIDNSWGTSEKVSKNWDPKVYTFDELYNSAYQASGEQFLEAYNQAAKELKETAQDERE
FSLQLVDKVHDYCPDRNPKIIVGFLPPFYPHVKNNRETDKENYMLEVVERLQQEGKDKHGIHFNVTEFFKGISDLSYFAV
PESEDIAKYMNPNMPANNHVYNLPIEEISKLDVSVINVGPMGKDAHQYTERLHMPFFTEKAPKILEFTVNEILKN
>Mature_555_residues
MWLEDKNKLKELLDRLVKVPSISGTSKEQGVAEEIHKILSEIPYFQENKDLLHINKLPGDSLERSYVTALLKGKGNKTVI
LLHHHDVVDVQDYGNLKEYAFDTDTITSKMETFDLPSDARKDLESGEWLFGRGVMDMKAGAALQLALMHDYSQNIEDFDG
NIVLVSVPDEENNSIGILSAVPHLNKLKEEHSLEYRSVIKSESHQPDDEGNSDIAIGSIGKILPFFYCFGKETHGGNPYG
GLNSSLIFSQVESLMEFNTDFCDKFRGELTPPPVNLKLNDLRGVYNVTTPQVTVGYYNILTITSSPYDILQKMQKVAKQA
LDNAIKIYDNSFDSFEELAGEDGIDNSWGTSEKVSKNWDPKVYTFDELYNSAYQASGEQFLEAYNQAAKELKETAQDERE
FSLQLVDKVHDYCPDRNPKIIVGFLPPFYPHVKNNRETDKENYMLEVVERLQQEGKDKHGIHFNVTEFFKGISDLSYFAV
PESEDIAKYMNPNMPANNHVYNLPIEEISKLDVSVINVGPMGKDAHQYTERLHMPFFTEKAPKILEFTVNEILKN

Specific function: Unknown

COG id: COG4187

COG function: function code E; Arginine degradation protein (predicted deacylase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis rocB [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002933
- InterPro:   IPR012166 [H]

Pfam domain/function: PF01546 Peptidase_M20 [H]

EC number: NA

Molecular weight: Translated: 63040; Mature: 63040

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWLEDKNKLKELLDRLVKVPSISGTSKEQGVAEEIHKILSEIPYFQENKDLLHINKLPGD
CCCCCHHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCC
SLERSYVTALLKGKGNKTVILLHHHDVVDVQDYGNLKEYAFDTDTITSKMETFDLPSDAR
HHHHHHHHHHHCCCCCCEEEEEECCCEEEHHHCCCHHHHCCCHHHHHHHHHHCCCCHHHH
KDLESGEWLFGRGVMDMKAGAALQLALMHDYSQNIEDFDGNIVLVSVPDEENNSIGILSA
HHHCCCCEEEECCCHHHCCCCCEEHHHHHHHHCCHHHCCCCEEEEECCCCCCCCEEEEEC
VPHLNKLKEEHSLEYRSVIKSESHQPDDEGNSDIAIGSIGKILPFFYCFGKETHGGNPYG
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCHHHHHHHHHHHCCCCCCCCCCC
GLNSSLIFSQVESLMEFNTDFCDKFRGELTPPPVNLKLNDLRGVYNVTTPQVTVGYYNIL
CCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCEEECCCCCEEECCCCEEEEEEEEEE
TITSSPYDILQKMQKVAKQALDNAIKIYDNSFDSFEELAGEDGIDNSWGTSEKVSKNWDP
EECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCHHHCCCCCC
KVYTFDELYNSAYQASGEQFLEAYNQAAKELKETAQDEREFSLQLVDKVHDYCPDRNPKI
CEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
IVGFLPPFYPHVKNNRETDKENYMLEVVERLQQEGKDKHGIHFNVTEFFKGISDLSYFAV
EEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHCCHHHCEEEEC
PESEDIAKYMNPNMPANNHVYNLPIEEISKLDVSVINVGPMGKDAHQYTERLHMPFFTEK
CCCHHHHHHCCCCCCCCCCEEECCHHHHHHCCEEEEECCCCCCHHHHHHHHHCCCCHHCC
APKILEFTVNEILKN
CCHHHHHHHHHHHCC
>Mature Secondary Structure
MWLEDKNKLKELLDRLVKVPSISGTSKEQGVAEEIHKILSEIPYFQENKDLLHINKLPGD
CCCCCHHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCC
SLERSYVTALLKGKGNKTVILLHHHDVVDVQDYGNLKEYAFDTDTITSKMETFDLPSDAR
HHHHHHHHHHHCCCCCCEEEEEECCCEEEHHHCCCHHHHCCCHHHHHHHHHHCCCCHHHH
KDLESGEWLFGRGVMDMKAGAALQLALMHDYSQNIEDFDGNIVLVSVPDEENNSIGILSA
HHHCCCCEEEECCCHHHCCCCCEEHHHHHHHHCCHHHCCCCEEEEECCCCCCCCEEEEEC
VPHLNKLKEEHSLEYRSVIKSESHQPDDEGNSDIAIGSIGKILPFFYCFGKETHGGNPYG
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCHHHHHHHHHHHCCCCCCCCCCC
GLNSSLIFSQVESLMEFNTDFCDKFRGELTPPPVNLKLNDLRGVYNVTTPQVTVGYYNIL
CCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCEEECCCCCEEECCCCEEEEEEEEEE
TITSSPYDILQKMQKVAKQALDNAIKIYDNSFDSFEELAGEDGIDNSWGTSEKVSKNWDP
EECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCHHHCCCCCC
KVYTFDELYNSAYQASGEQFLEAYNQAAKELKETAQDEREFSLQLVDKVHDYCPDRNPKI
CEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
IVGFLPPFYPHVKNNRETDKENYMLEVVERLQQEGKDKHGIHFNVTEFFKGISDLSYFAV
EEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHCCHHHCEEEEC
PESEDIAKYMNPNMPANNHVYNLPIEEISKLDVSVINVGPMGKDAHQYTERLHMPFFTEK
CCCHHHHHHCCCCCCCCCCEEECCHHHHHHCCEEEEECCCCCCHHHHHHHHHCCCCHHCC
APKILEFTVNEILKN
CCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]