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The map label for this gene is 188587373

Identifier: 188587373

GI number: 188587373

Start: 3003987

End: 3004988

Strand: Reverse

Name: 188587373

Synonym: Nther_2780

Alternate gene names: NA

Gene position: 3004988-3003987 (Counterclockwise)

Preceding gene: 188587374

Following gene: 188587372

Centisome position: 94.93

GC content: 34.03

Gene sequence:

>1002_bases
TTGAAAAAACCTTTTTTGTTCATTTTCGGTATTTTAGTTATTACTTTAGTAGTTGTCTATATAGGTTGGGAAGAGATTTA
TTTAGTCCTAAATAGAATGGAAGCTGCTCAGATAATGATTATGGCATTACTGCAGGTTTTTACCATGTCATTGACGACTC
TCATTTGGTATTATCTATTAAAGCAAAAGACAAATATGGTATCATACAGCAAAGTTTTTTCTATTAATTTGGCAGGTAAG
TTTGTGGAGAGTGTAACTCCTTCGGTTAAAGTGGGCGGAGAAGGTTTAAAGGTTTATCTCATGAAAAAGAGTACTGCCTT
GACATATCAAGAATTAATGGCTGTAACTGTTGTTACCAAATTTTTCTCTTTACTACCTTTCCTAGTCATTACTTTTATCA
CTTTGAGTTATGCTTTAATGTTTCTATCTCTTCCTACTATCGTTTATTTAGCTTTTATTGGACTAGTACTGTTTTTTATA
TTGTTCTTTATATTTTTTAATTACTCAGCCATTTATGAACATTTTTATCCAAAGGTTTCAGGAAAAAGTTTTATTAATAA
ACCTGTTATTGAGAAATTATTAACTAAATGTCAAAAAGTTCACAGGTTTTTATCCCAGGCTTCTATGGAATCTAATTCTT
TAGTAACTCGACCTGTTCAAAGAGGGTTATTGTTTTGTATCGGTGCTCTCGTATGGGCAAGTTATCCACTCAAAGTGTAC
TTAGTCGCTACAATGCTCGGTTTTGATATAAATCCAATTATAGCGGTTATTGCCACTTATACTGCTTACTTAGTAAGCAT
GATACCGTTACTTCCCGGAGGTCTTGCTACCTTTGAAGGTAGTATGGCTTTAGTTCTAACTATAGGAGGATTAAGTTCCC
CAGAATCTCTTTCCGTAGCATTGATGACTCGAGCATTCACTTTTTGGCTGCCTCTGATTATTTCTGCCTTTATAACCGGG
TATTATGTTCGAACTACCGGAGCTGAGGCTAGTAATAACTAA

Upstream 100 bases:

>100_bases
ATCTTTCCTTAGATTTAGTACCCGATGACTGGGTATTGCAAAATATGAAGACATTTAACTATTCGAATCTCTACCTAACT
ACTTAACAGGAGGAATTTAT

Downstream 100 bases:

>100_bases
AAATTGGTGCAATAGCAGGGCAAGAGAAGTAAGAAAAAATAATCATAATTTAATAATCATAATTTAAAATATAGTGGCAG
GTGATTTAAGTGTCAGATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MKKPFLFIFGILVITLVVVYIGWEEIYLVLNRMEAAQIMIMALLQVFTMSLTTLIWYYLLKQKTNMVSYSKVFSINLAGK
FVESVTPSVKVGGEGLKVYLMKKSTALTYQELMAVTVVTKFFSLLPFLVITFITLSYALMFLSLPTIVYLAFIGLVLFFI
LFFIFFNYSAIYEHFYPKVSGKSFINKPVIEKLLTKCQKVHRFLSQASMESNSLVTRPVQRGLLFCIGALVWASYPLKVY
LVATMLGFDINPIIAVIATYTAYLVSMIPLLPGGLATFEGSMALVLTIGGLSSPESLSVALMTRAFTFWLPLIISAFITG
YYVRTTGAEASNN

Sequences:

>Translated_333_residues
MKKPFLFIFGILVITLVVVYIGWEEIYLVLNRMEAAQIMIMALLQVFTMSLTTLIWYYLLKQKTNMVSYSKVFSINLAGK
FVESVTPSVKVGGEGLKVYLMKKSTALTYQELMAVTVVTKFFSLLPFLVITFITLSYALMFLSLPTIVYLAFIGLVLFFI
LFFIFFNYSAIYEHFYPKVSGKSFINKPVIEKLLTKCQKVHRFLSQASMESNSLVTRPVQRGLLFCIGALVWASYPLKVY
LVATMLGFDINPIIAVIATYTAYLVSMIPLLPGGLATFEGSMALVLTIGGLSSPESLSVALMTRAFTFWLPLIISAFITG
YYVRTTGAEASNN
>Mature_333_residues
MKKPFLFIFGILVITLVVVYIGWEEIYLVLNRMEAAQIMIMALLQVFTMSLTTLIWYYLLKQKTNMVSYSKVFSINLAGK
FVESVTPSVKVGGEGLKVYLMKKSTALTYQELMAVTVVTKFFSLLPFLVITFITLSYALMFLSLPTIVYLAFIGLVLFFI
LFFIFFNYSAIYEHFYPKVSGKSFINKPVIEKLLTKCQKVHRFLSQASMESNSLVTRPVQRGLLFCIGALVWASYPLKVY
LVATMLGFDINPIIAVIATYTAYLVSMIPLLPGGLATFEGSMALVLTIGGLSSPESLSVALMTRAFTFWLPLIISAFITG
YYVRTTGAEASNN

Specific function: Unknown

COG id: COG0392

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0104 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022791
- InterPro:   IPR005242 [H]

Pfam domain/function: PF03706 UPF0104 [H]

EC number: NA

Molecular weight: Translated: 37312; Mature: 37312

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]