| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is 188587311
Identifier: 188587311
GI number: 188587311
Start: 2931782
End: 2932495
Strand: Reverse
Name: 188587311
Synonym: Nther_2715
Alternate gene names: NA
Gene position: 2932495-2931782 (Counterclockwise)
Preceding gene: 188587312
Following gene: 188587304
Centisome position: 92.64
GC content: 35.99
Gene sequence:
>714_bases ATGACAAAAGTTAGAGCTTTCATGTCTTTACTTGTTTTAATTGTAGTAATTGCTACTTTAATTGTGCTGCCCGCTTGTAG TTTCAATAACAGTGATGATGCGGCCAAAGAAAACAGTGATGCGGCCACAGAACCTGAATCAGAGGAAAATGCCTCAGAAC CCAAAAATTATGAGGAATGGCCTGAAACCAAAACTGATATTATGACTATGGAAGGAATGGAAGAAGAAATTGAATTGCAG CGGTTTTTACATCCAGATGATTTATTCCTGACTTACTATCCTGAAGATATGATTACTGAAGAGATAACCTGGAATCACGG TTCGGTTCAAGCTTTTTATTCCAATTTTCAAGGTGAAGTAAATAAAGATGCCTTTGTCAAGTTTTATATTTTCGATAATG ATAAGGAACCAGCTTCTCAGGGGGAGCTAAATTTACAAGAATTTTCAAGTGAAATGGATTATGAATTGGAAAAATCAGAT TCAGAAATAAAGGAAGAACTCTTGGAAAAGCATCCTTGGGCCATGGACGCAGGTATTTACTATGATAATAACATTTCGGG AAATGTATTTTCTGGAGAGCAATCTGGAACTTATTTCCTGGTCGTTATTCAATATCCCCATGAGTTTGGTGATGGCATGG AACCACGTATTAAAATGATTTTAGACCATTATTATTGGATCGATACGGAGGAATCTTTAACGGAAGTTAATTAA
Upstream 100 bases:
>100_bases TTTTTGTCAGGCAGCAATTAAACGGGCAGTAACTTTTTGCCAGTATCTTCGTCTTAATATATAAATACAAAATAATCAAA AAGAAAGAGGTAATGGCGTT
Downstream 100 bases:
>100_bases TCGTTAAGCTTGAGGAGTGAGTGTATATGTCTTATTTTGATTATCAGATTTTAGGTTCTGTAATGCCTATGCTAGAAATT AGTCTACAAAAGGACCAACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MTKVRAFMSLLVLIVVIATLIVLPACSFNNSDDAAKENSDAATEPESEENASEPKNYEEWPETKTDIMTMEGMEEEIELQ RFLHPDDLFLTYYPEDMITEEITWNHGSVQAFYSNFQGEVNKDAFVKFYIFDNDKEPASQGELNLQEFSSEMDYELEKSD SEIKEELLEKHPWAMDAGIYYDNNISGNVFSGEQSGTYFLVVIQYPHEFGDGMEPRIKMILDHYYWIDTEESLTEVN
Sequences:
>Translated_237_residues MTKVRAFMSLLVLIVVIATLIVLPACSFNNSDDAAKENSDAATEPESEENASEPKNYEEWPETKTDIMTMEGMEEEIELQ RFLHPDDLFLTYYPEDMITEEITWNHGSVQAFYSNFQGEVNKDAFVKFYIFDNDKEPASQGELNLQEFSSEMDYELEKSD SEIKEELLEKHPWAMDAGIYYDNNISGNVFSGEQSGTYFLVVIQYPHEFGDGMEPRIKMILDHYYWIDTEESLTEVN >Mature_236_residues TKVRAFMSLLVLIVVIATLIVLPACSFNNSDDAAKENSDAATEPESEENASEPKNYEEWPETKTDIMTMEGMEEEIELQR FLHPDDLFLTYYPEDMITEEITWNHGSVQAFYSNFQGEVNKDAFVKFYIFDNDKEPASQGELNLQEFSSEMDYELEKSDS EIKEELLEKHPWAMDAGIYYDNNISGNVFSGEQSGTYFLVVIQYPHEFGDGMEPRIKMILDHYYWIDTEESLTEVN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27425; Mature: 27293
Theoretical pI: Translated: 3.82; Mature: 3.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKVRAFMSLLVLIVVIATLIVLPACSFNNSDDAAKENSDAATEPESEENASEPKNYEEW CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHC PETKTDIMTMEGMEEEIELQRFLHPDDLFLTYYPEDMITEEITWNHGSVQAFYSNFQGEV CCCHHHEEECCCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHCCCCCCHHHHHHCCCCCC NKDAFVKFYIFDNDKEPASQGELNLQEFSSEMDYELEKSDSEIKEELLEKHPWAMDAGIY CCCEEEEEEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEECCEE YDNNISGNVFSGEQSGTYFLVVIQYPHEFGDGMEPRIKMILDHYYWIDTEESLTEVN ECCCCCCCEECCCCCCEEEEEEEECCHHHCCCCCHHHHHHHHHHEEECCHHHHHCCC >Mature Secondary Structure TKVRAFMSLLVLIVVIATLIVLPACSFNNSDDAAKENSDAATEPESEENASEPKNYEEW CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHC PETKTDIMTMEGMEEEIELQRFLHPDDLFLTYYPEDMITEEITWNHGSVQAFYSNFQGEV CCCHHHEEECCCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHCCCCCCHHHHHHCCCCCC NKDAFVKFYIFDNDKEPASQGELNLQEFSSEMDYELEKSDSEIKEELLEKHPWAMDAGIY CCCEEEEEEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEECCEE YDNNISGNVFSGEQSGTYFLVVIQYPHEFGDGMEPRIKMILDHYYWIDTEESLTEVN ECCCCCCCEECCCCCCEEEEEEEECCHHHCCCCCHHHHHHHHHHEEECCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA