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The map label for this gene is ytcJ [H]

Identifier: 188587235

GI number: 188587235

Start: 2833016

End: 2834617

Strand: Reverse

Name: ytcJ [H]

Synonym: Nther_2637

Alternate gene names: 188587235

Gene position: 2834617-2833016 (Counterclockwise)

Preceding gene: 188587237

Following gene: 188587234

Centisome position: 89.55

GC content: 37.02

Gene sequence:

>1602_bases
TTGACCGAATCACAAACTCTAATTTTAAAAAATGGGAACTTTTATACTGGGGGAGAGTTTATCTCTGGAAACTTAGTAAT
TAGACAGGGCAAGATAGAAGAATTGGCGACTTCTGAAGAAATTTTCAACAAATATACAGCTGATAAAATCATCAATCTAG
AAGGTAAAACTGTATTTCCTGGATTTATTGACAGTCATATTCACTTAGTCCAAACAGGTTTTTTACAAGTACACCAGGAT
TTATCTCAGGCGAGCTCTGTAGATGAATTAAAAGAACTGATAAGGGCTGAAGCAAAGCGTAAACAACCGGGTGAATGGAT
CATCGGATCTTCCTTTGACGATAACAAATTTAAAGATGATAGATTTCCCACTAAAGAGGATTTAGATGAAGTAGCACCTG
ATAATCCTGTTTTTATCATTAGAATCTGTACACACTTGATGATAGCTAACAGCAAAGCTTTAGATCTCGCTAGGATAGAC
AAAAATAAGGAAGCACCACAGGGTGGTGGGATTGATCGTGATGAAAGTGGAGAACCTAATGGAATTTTAAGGAGAAATGC
AGGGGATTTAGTCTATAACATTATATATTCAAATAATTCTATGATTAAAAAGGCCATTAAAGCTTCTCTTAACTATCTAA
AAGAAAATGGCATTACTACAGCTCATTCAATGGCTATTGGAGTGAAAAAACACCAGCATTACTTTAATATATTACAGGCT
TACAGAGAAGCCATGGAGGAAGAGGGTTATCCTGTTCGCGTTAAGCTTGGTGCCGAGCATGAATTGTTAGACCATTTAAT
ATCTGAAGATATGAATTACTTGGATGGAAATGAGTTCTTACAGCAAGGATACATTAAGTTTTTTACCGATGGATCTTATG
GAAGCCGAACTGCATTACTCAATAATCCGTACGAAGATGAACCTGATAACTGCGGAATAGAAGCAACCTCAAAGGACAGA
TTATATAAATACGCAAAGAAGGCTCATGAACATGGGTATCAATGTGCCATTCATGCATTGGGGGATAAAGCCCTATCGAA
TGCCTTGGATGTATTGGAAAGTTTGATAGAAAAAGGGCACAATCCTTTAAGACATAGAATAGTCCATGCCGGATTAGCAC
CTAAGGATCTTATTGATCGCATTAAAGAGCTAAATGTTTCTGTGGATATTCAACCAAACTTTGTAGCAAGTGAAGTGGAT
TGGTTAGAGACAGCCCTTGGAAATAGAACTGAAGATGTGTATACCTGGAATACTATGAAAAATGAAGGGATCAATTTAGC
GGCTAGCTCGGATTGTCCTGTAGAACCTGTTAATCCTTTTTACGGTATTAGAGCTGCCACAACGAGAAAAAACCTAGAAA
ATCGTCCTGCCGATGGATTTAACTCGAAAGAAAGAGTAACTTTAGAAGACGCCATTGATATGTACACCATTAACGGTGCT
TATCAATACTTTGATGAAGATTCTCTAGGAAGCATTGAACCAAATAAATTTGCTGACTTAGTTGTACTGTCACAAAACCC
CATGGAATTAGCTCCGGATCAGCTATTAGATATAAAAATTGACATGACTTTTGTTGGTGGACGTCTGGTTTATCAAAGAT
AA

Upstream 100 bases:

>100_bases
TTATGATTATAGTAATTTGCTCTACTAAAGTTTAGATGATATGAAATTAAAAAAGTCTTATCAAAATTTTCAAAAAATGT
AAAGTTGAGGGGGTAATGTT

Downstream 100 bases:

>100_bases
AAAAACCTTGACTTTTTAACTTTGATTAACCTAATAAAGGGGGTGCTTACTTTATTGTCCAATCATGACCAGTAACAAAA
CAAAATAATTAGTTTTTATT

Product: Amidohydrolase 3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 533; Mature: 532

Protein sequence:

>533_residues
MTESQTLILKNGNFYTGGEFISGNLVIRQGKIEELATSEEIFNKYTADKIINLEGKTVFPGFIDSHIHLVQTGFLQVHQD
LSQASSVDELKELIRAEAKRKQPGEWIIGSSFDDNKFKDDRFPTKEDLDEVAPDNPVFIIRICTHLMIANSKALDLARID
KNKEAPQGGGIDRDESGEPNGILRRNAGDLVYNIIYSNNSMIKKAIKASLNYLKENGITTAHSMAIGVKKHQHYFNILQA
YREAMEEEGYPVRVKLGAEHELLDHLISEDMNYLDGNEFLQQGYIKFFTDGSYGSRTALLNNPYEDEPDNCGIEATSKDR
LYKYAKKAHEHGYQCAIHALGDKALSNALDVLESLIEKGHNPLRHRIVHAGLAPKDLIDRIKELNVSVDIQPNFVASEVD
WLETALGNRTEDVYTWNTMKNEGINLAASSDCPVEPVNPFYGIRAATTRKNLENRPADGFNSKERVTLEDAIDMYTINGA
YQYFDEDSLGSIEPNKFADLVVLSQNPMELAPDQLLDIKIDMTFVGGRLVYQR

Sequences:

>Translated_533_residues
MTESQTLILKNGNFYTGGEFISGNLVIRQGKIEELATSEEIFNKYTADKIINLEGKTVFPGFIDSHIHLVQTGFLQVHQD
LSQASSVDELKELIRAEAKRKQPGEWIIGSSFDDNKFKDDRFPTKEDLDEVAPDNPVFIIRICTHLMIANSKALDLARID
KNKEAPQGGGIDRDESGEPNGILRRNAGDLVYNIIYSNNSMIKKAIKASLNYLKENGITTAHSMAIGVKKHQHYFNILQA
YREAMEEEGYPVRVKLGAEHELLDHLISEDMNYLDGNEFLQQGYIKFFTDGSYGSRTALLNNPYEDEPDNCGIEATSKDR
LYKYAKKAHEHGYQCAIHALGDKALSNALDVLESLIEKGHNPLRHRIVHAGLAPKDLIDRIKELNVSVDIQPNFVASEVD
WLETALGNRTEDVYTWNTMKNEGINLAASSDCPVEPVNPFYGIRAATTRKNLENRPADGFNSKERVTLEDAIDMYTINGA
YQYFDEDSLGSIEPNKFADLVVLSQNPMELAPDQLLDIKIDMTFVGGRLVYQR
>Mature_532_residues
TESQTLILKNGNFYTGGEFISGNLVIRQGKIEELATSEEIFNKYTADKIINLEGKTVFPGFIDSHIHLVQTGFLQVHQDL
SQASSVDELKELIRAEAKRKQPGEWIIGSSFDDNKFKDDRFPTKEDLDEVAPDNPVFIIRICTHLMIANSKALDLARIDK
NKEAPQGGGIDRDESGEPNGILRRNAGDLVYNIIYSNNSMIKKAIKASLNYLKENGITTAHSMAIGVKKHQHYFNILQAY
REAMEEEGYPVRVKLGAEHELLDHLISEDMNYLDGNEFLQQGYIKFFTDGSYGSRTALLNNPYEDEPDNCGIEATSKDRL
YKYAKKAHEHGYQCAIHALGDKALSNALDVLESLIEKGHNPLRHRIVHAGLAPKDLIDRIKELNVSVDIQPNFVASEVDW
LETALGNRTEDVYTWNTMKNEGINLAASSDCPVEPVNPFYGIRAATTRKNLENRPADGFNSKERVTLEDAIDMYTINGAY
QYFDEDSLGSIEPNKFADLVVLSQNPMELAPDQLLDIKIDMTFVGGRLVYQR

Specific function: Unknown

COG id: COG1574

COG function: function code R; Predicted metal-dependent hydrolase with the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: NA

Molecular weight: Translated: 59943; Mature: 59812

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTESQTLILKNGNFYTGGEFISGNLVIRQGKIEELATSEEIFNKYTADKIINLEGKTVFP
CCCCCEEEEECCCEEECCEEEECCEEEECCCHHHHHHHHHHHHHHHHHHEEECCCCEECC
GFIDSHIHLVQTGFLQVHQDLSQASSVDELKELIRAEAKRKQPGEWIIGSSFDDNKFKDD
CHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCC
RFPTKEDLDEVAPDNPVFIIRICTHLMIANSKALDLARIDKNKEAPQGGGIDRDESGEPN
CCCCHHHHHHHCCCCCEEHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCC
GILRRNAGDLVYNIIYSNNSMIKKAIKASLNYLKENGITTAHSMAIGVKKHQHYFNILQA
CEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
YREAMEEEGYPVRVKLGAEHELLDHLISEDMNYLDGNEFLQQGYIKFFTDGSYGSRTALL
HHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCHHHHHHCCCEEEEECCCCCCCEEEE
NNPYEDEPDNCGIEATSKDRLYKYAKKAHEHGYQCAIHALGDKALSNALDVLESLIEKGH
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHCCC
NPLRHRIVHAGLAPKDLIDRIKELNVSVDIQPNFVASEVDWLETALGNRTEDVYTWNTMK
CHHHHHHHHCCCCHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCC
NEGINLAASSDCPVEPVNPFYGIRAATTRKNLENRPADGFNSKERVTLEDAIDMYTINGA
CCCCEEEECCCCCCCCCCCCCCCEEHHHHHCCCCCCCCCCCCCCEEEHHHCCCEEEECCE
YQYFDEDSLGSIEPNKFADLVVLSQNPMELAPDQLLDIKIDMTFVGGRLVYQR
EEECCCCCCCCCCCCCCEEEEEECCCCHHCCCCCEEEEEEEEEEECCEEEECC
>Mature Secondary Structure 
TESQTLILKNGNFYTGGEFISGNLVIRQGKIEELATSEEIFNKYTADKIINLEGKTVFP
CCCCEEEEECCCEEECCEEEECCEEEECCCHHHHHHHHHHHHHHHHHHEEECCCCEECC
GFIDSHIHLVQTGFLQVHQDLSQASSVDELKELIRAEAKRKQPGEWIIGSSFDDNKFKDD
CHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCC
RFPTKEDLDEVAPDNPVFIIRICTHLMIANSKALDLARIDKNKEAPQGGGIDRDESGEPN
CCCCHHHHHHHCCCCCEEHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCC
GILRRNAGDLVYNIIYSNNSMIKKAIKASLNYLKENGITTAHSMAIGVKKHQHYFNILQA
CEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
YREAMEEEGYPVRVKLGAEHELLDHLISEDMNYLDGNEFLQQGYIKFFTDGSYGSRTALL
HHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCHHHHHHCCCEEEEECCCCCCCEEEE
NNPYEDEPDNCGIEATSKDRLYKYAKKAHEHGYQCAIHALGDKALSNALDVLESLIEKGH
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHCCC
NPLRHRIVHAGLAPKDLIDRIKELNVSVDIQPNFVASEVDWLETALGNRTEDVYTWNTMK
CHHHHHHHHCCCCHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCC
NEGINLAASSDCPVEPVNPFYGIRAATTRKNLENRPADGFNSKERVTLEDAIDMYTINGA
CCCCEEEECCCCCCCCCCCCCCCEEHHHHHCCCCCCCCCCCCCCEEEHHHCCCEEEECCE
YQYFDEDSLGSIEPNKFADLVVLSQNPMELAPDQLLDIKIDMTFVGGRLVYQR
EEECCCCCCCCCCCCCCEEEEEECCCCHHCCCCCEEEEEEEEEEECCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]