Definition Natranaerobius thermophilus JW/NM-WN-LF, complete genome.
Accession NC_010718
Length 3,165,557

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The map label for this gene is 188587169

Identifier: 188587169

GI number: 188587169

Start: 2757021

End: 2757443

Strand: Direct

Name: 188587169

Synonym: Nther_2568

Alternate gene names: NA

Gene position: 2757021-2757443 (Clockwise)

Preceding gene: 188587168

Following gene: 188587173

Centisome position: 87.09

GC content: 30.26

Gene sequence:

>423_bases
ATGGTTAATAAAGACGTGATAACCAGACGACTATCTAATCTTGAAGAATATTATCATGATTTAGCCAATATACAGAATGA
TATAACATCTGATCAATTATTTAATGATAAAATTAAGAGAAGGTACATAGAAAGAACCTTACAGATGGCGATAGAAAGCT
GTCTTGACATTGCCGGACATATTATATCTTACTCAGGATTTCGGGAACCAATCAGTAATCAGGATACCTTTCAGATTTTA
ATTGAAGAAAATATTGTTGACAGTCACTTAGGAGAGCGCCTTAAAAAAATGGCTAAGTTTAGGAATATTATTGTACATGA
TTACGCTATTATAGACCCTGAAATCGTTCATTCAATTGTGAAAAATAATATTAGTGATCTAAGAGAGTTTTCTATTATTA
TAAAGAAGACATATTTGGATTAA

Upstream 100 bases:

>100_bases
AGTTTTGAGGTGAAGCAAAGAAAACTATTCTTTGACATGAAGCATTTATATGATAGATATTATGATCAAATGTTAAAACG
ATTAGAAAGGGGTGAAGAAG

Downstream 100 bases:

>100_bases
GATAATTATATTATTTTAAAAAGTTCTGTACTCAAAAAAAACTACCAATTTATTCTAGAATAAATTGGTAGTTTACGAAC
AAAAAAGCAAAAATAATATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MVNKDVITRRLSNLEEYYHDLANIQNDITSDQLFNDKIKRRYIERTLQMAIESCLDIAGHIISYSGFREPISNQDTFQIL
IEENIVDSHLGERLKKMAKFRNIIVHDYAIIDPEIVHSIVKNNISDLREFSIIIKKTYLD

Sequences:

>Translated_140_residues
MVNKDVITRRLSNLEEYYHDLANIQNDITSDQLFNDKIKRRYIERTLQMAIESCLDIAGHIISYSGFREPISNQDTFQIL
IEENIVDSHLGERLKKMAKFRNIIVHDYAIIDPEIVHSIVKNNISDLREFSIIIKKTYLD
>Mature_140_residues
MVNKDVITRRLSNLEEYYHDLANIQNDITSDQLFNDKIKRRYIERTLQMAIESCLDIAGHIISYSGFREPISNQDTFQIL
IEENIVDSHLGERLKKMAKFRNIIVHDYAIIDPEIVHSIVKNNISDLREFSIIIKKTYLD

Specific function: Unknown

COG id: COG2445

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16468; Mature: 16468

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNKDVITRRLSNLEEYYHDLANIQNDITSDQLFNDKIKRRYIERTLQMAIESCLDIAGH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IISYSGFREPISNQDTFQILIEENIVDSHLGERLKKMAKFRNIIVHDYAIIDPEIVHSIV
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
KNNISDLREFSIIIKKTYLD
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVNKDVITRRLSNLEEYYHDLANIQNDITSDQLFNDKIKRRYIERTLQMAIESCLDIAGH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IISYSGFREPISNQDTFQILIEENIVDSHLGERLKKMAKFRNIIVHDYAIIDPEIVHSIV
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
KNNISDLREFSIIIKKTYLD
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA