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The map label for this gene is 188587159

Identifier: 188587159

GI number: 188587159

Start: 2748094

End: 2748567

Strand: Reverse

Name: 188587159

Synonym: Nther_2558

Alternate gene names: NA

Gene position: 2748567-2748094 (Counterclockwise)

Preceding gene: 188587163

Following gene: 188587158

Centisome position: 86.83

GC content: 33.33

Gene sequence:

>474_bases
ATGATATTTGGAATTATTTTTGGTATACTTAATCTAGAGGTTATAAAACGAAATAGTCAAAGGTGTGATGGTATGACTAA
ACTTTTTGATGACCTGAGTACTTATTTTTCCCAATTCGGTGAAATAAAAGCTGCATATCTATTTGGTTCCTGTGCGGTAG
GAAGAAATAATAGTATGAGCGATATAGACATTGCTGTACTTTTAAAAGATGGTACCAATAATCATGACAAAAAGATAGAA
TTATTGGCAGGATTAGTTGAACTTGGCTATGACAATGTCGATCTTGCAATACTAAATGACATGTCAATTGTAGGTAGGTA
TGAAGTGATAAAACATAACAAAATTCTCTATGCAGATGACGATTTCGATGTACACAGTTACTTTTCCCTTGTGATTCGCC
AATATCTCGACTTCAAACCATATCTGGAAGTTCAAAGGAAGTATTTAAAGGAGAGGATTATGAATGGTGAATAG

Upstream 100 bases:

>100_bases
TTATGTGTATATGGCATTAAAATATAAATGTTTAATCTTAATCAATTTGTACTGAATAAATAAAGGTATAATAAAACAAT
TCAACACGAAATGCGCTTTG

Downstream 100 bases:

>100_bases
GGAATCGGGATATACCAGTCATCCTGTATGATAATAGTTATATCAATGATAAAGAGAAAGATTTATTTATCAGGATAATT
GGTATGAGAAATGTATTAGT

Product: DNA polymerase beta domain protein region

Products: NA

Alternate protein names: Nucleotidyltransferase; DNA Polymerase Beta Subunit; DNA Polymerase Subunit Beta; Nucleotidyltransferase Domain-Containing Protein; DNA Polymerase Beta-Like Region

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MIFGIIFGILNLEVIKRNSQRCDGMTKLFDDLSTYFSQFGEIKAAYLFGSCAVGRNNSMSDIDIAVLLKDGTNNHDKKIE
LLAGLVELGYDNVDLAILNDMSIVGRYEVIKHNKILYADDDFDVHSYFSLVIRQYLDFKPYLEVQRKYLKERIMNGE

Sequences:

>Translated_157_residues
MIFGIIFGILNLEVIKRNSQRCDGMTKLFDDLSTYFSQFGEIKAAYLFGSCAVGRNNSMSDIDIAVLLKDGTNNHDKKIE
LLAGLVELGYDNVDLAILNDMSIVGRYEVIKHNKILYADDDFDVHSYFSLVIRQYLDFKPYLEVQRKYLKERIMNGE
>Mature_157_residues
MIFGIIFGILNLEVIKRNSQRCDGMTKLFDDLSTYFSQFGEIKAAYLFGSCAVGRNNSMSDIDIAVLLKDGTNNHDKKIE
LLAGLVELGYDNVDLAILNDMSIVGRYEVIKHNKILYADDDFDVHSYFSLVIRQYLDFKPYLEVQRKYLKERIMNGE

Specific function: Unknown

COG id: COG1708

COG function: function code R; Predicted nucleotidyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18036; Mature: 18036

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFGIIFGILNLEVIKRNSQRCDGMTKLFDDLSTYFSQFGEIKAAYLFGSCAVGRNNSMS
CHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHEEECEECCCCCCCC
DIDIAVLLKDGTNNHDKKIELLAGLVELGYDNVDLAILNDMSIVGRYEVIKHNKILYADD
CEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHEEECCEEEEECC
DFDVHSYFSLVIRQYLDFKPYLEVQRKYLKERIMNGE
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIFGIIFGILNLEVIKRNSQRCDGMTKLFDDLSTYFSQFGEIKAAYLFGSCAVGRNNSMS
CHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHEEECEECCCCCCCC
DIDIAVLLKDGTNNHDKKIELLAGLVELGYDNVDLAILNDMSIVGRYEVIKHNKILYADD
CEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHEEECCEEEEECC
DFDVHSYFSLVIRQYLDFKPYLEVQRKYLKERIMNGE
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA