Click here to switch to the map view.

The map label for this gene is 188587124

Identifier: 188587124

GI number: 188587124

Start: 2713078

End: 2713875

Strand: Reverse

Name: 188587124

Synonym: Nther_2520

Alternate gene names: NA

Gene position: 2713875-2713078 (Counterclockwise)

Preceding gene: 188587125

Following gene: 188587123

Centisome position: 85.73

GC content: 34.09

Gene sequence:

>798_bases
ATGTTAGCAGAGATAAAGGGGAAGCTTGACAAGAGAGGTTCGGATATACATGAAAGGTCTGAAGATAAGCTGACGGGTGA
CTTTTTTGGCAGTTTGCGTTATCTTTCTTTTCCCAAGGCTATGAAGCAGATACTTACAGAAATGCAGATACTAAAAAAAG
AAGCTAATGATATTGGGAGAATTCTGGAAAGTATTGATATTGAGTACTGGGATGATTGTATTAAATTTTGGTATTATCAT
GATGAAGTTGGGGAGTTAGATGTTCTTCTGTCATTTGAGCATTTACAAATAGGCATCGAAGTGAAGTATTTAAGTGGACT
CTCTTCAGATGATGATATAAGTAATGATAATGAAGATCATGAAGAAATCAGTATTAATCAACTGGCGAGACAAAGTCGAA
TTTTAAATAGTATTAAAGATTCTGAGCAATCAGCACTGTTGCTTTTTATAGCCCCGGAGCCGTATCACTACTCAACAGTA
GAAGAAGTGATTCAAAGGAATATATTAAGGGAAGGAGTTTCTATAGCTAGCCTTTCCTGGGAAAATATAAACCAAACCAT
AAAAGCATTATTGATAAGTGATGAACTGAATGAATTTGAGAGATTAATATTGACAGACATAAATCTATTACTGGAAGGTA
GAGGGTTAAATAGATTTAGAAACTTTGAGTTTGAGGCCAACACAGTTGAGGAAAGCATGTATTATTATTTTAAAGGGGCT
TCAACTAGAGAAGGTATTACTATTAATTTTAATGTTCAAACTCCAATTAAGAGAGGAGAATTTTATGAGTTTGAGTGA

Upstream 100 bases:

>100_bases
AATTTATTTTTCATATAAAGTGATTACAACATAACCTTTTGTTGGTGTTTTGCGTTTAAAGGGCTATGGCAGGGGAAGAA
TTTAATCTGGAGTTGGTTTA

Downstream 100 bases:

>100_bases
TAACATTAACAACGCTTTTGAAGTTGTGTTAAAGACTTATGAAAATATTGATAAGTTGATGCGCTACTGTGACACTATCT
CATCGGAGTTCAATTATATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MLAEIKGKLDKRGSDIHERSEDKLTGDFFGSLRYLSFPKAMKQILTEMQILKKEANDIGRILESIDIEYWDDCIKFWYYH
DEVGELDVLLSFEHLQIGIEVKYLSGLSSDDDISNDNEDHEEISINQLARQSRILNSIKDSEQSALLLFIAPEPYHYSTV
EEVIQRNILREGVSIASLSWENINQTIKALLISDELNEFERLILTDINLLLEGRGLNRFRNFEFEANTVEESMYYYFKGA
STREGITINFNVQTPIKRGEFYEFE

Sequences:

>Translated_265_residues
MLAEIKGKLDKRGSDIHERSEDKLTGDFFGSLRYLSFPKAMKQILTEMQILKKEANDIGRILESIDIEYWDDCIKFWYYH
DEVGELDVLLSFEHLQIGIEVKYLSGLSSDDDISNDNEDHEEISINQLARQSRILNSIKDSEQSALLLFIAPEPYHYSTV
EEVIQRNILREGVSIASLSWENINQTIKALLISDELNEFERLILTDINLLLEGRGLNRFRNFEFEANTVEESMYYYFKGA
STREGITINFNVQTPIKRGEFYEFE
>Mature_265_residues
MLAEIKGKLDKRGSDIHERSEDKLTGDFFGSLRYLSFPKAMKQILTEMQILKKEANDIGRILESIDIEYWDDCIKFWYYH
DEVGELDVLLSFEHLQIGIEVKYLSGLSSDDDISNDNEDHEEISINQLARQSRILNSIKDSEQSALLLFIAPEPYHYSTV
EEVIQRNILREGVSIASLSWENINQTIKALLISDELNEFERLILTDINLLLEGRGLNRFRNFEFEANTVEESMYYYFKGA
STREGITINFNVQTPIKRGEFYEFE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30875; Mature: 30875

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAEIKGKLDKRGSDIHERSEDKLTGDFFGSLRYLSFPKAMKQILTEMQILKKEANDIGR
CCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILESIDIEYWDDCIKFWYYHDEVGELDVLLSFEHLQIGIEVKYLSGLSSDDDISNDNEDH
HHHHCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCH
EEISINQLARQSRILNSIKDSEQSALLLFIAPEPYHYSTVEEVIQRNILREGVSIASLSW
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEECCH
ENINQTIKALLISDELNEFERLILTDINLLLEGRGLNRFRNFEFEANTVEESMYYYFKGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHCCCCCCHHHHHHEEEEEECC
STREGITINFNVQTPIKRGEFYEFE
CCCCCEEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MLAEIKGKLDKRGSDIHERSEDKLTGDFFGSLRYLSFPKAMKQILTEMQILKKEANDIGR
CCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILESIDIEYWDDCIKFWYYHDEVGELDVLLSFEHLQIGIEVKYLSGLSSDDDISNDNEDH
HHHHCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCH
EEISINQLARQSRILNSIKDSEQSALLLFIAPEPYHYSTVEEVIQRNILREGVSIASLSW
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEECCH
ENINQTIKALLISDELNEFERLILTDINLLLEGRGLNRFRNFEFEANTVEESMYYYFKGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHCCCCCCHHHHHHEEEEEECC
STREGITINFNVQTPIKRGEFYEFE
CCCCCEEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA