| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is 188587100
Identifier: 188587100
GI number: 188587100
Start: 2679837
End: 2682191
Strand: Reverse
Name: 188587100
Synonym: Nther_2494
Alternate gene names: NA
Gene position: 2682191-2679837 (Counterclockwise)
Preceding gene: 188587101
Following gene: 188587099
Centisome position: 84.73
GC content: 40.68
Gene sequence:
>2355_bases ATGAATCAGAATGGAGCGAAACAATCTGTTTTCAATGTAATAGCTTGGATTTTAGCACCAGCCATAATATTGACCATGGC CAGTGGAGTTGCCATGGGACAAAGCTTGGGCGACTTTAGTTTTGCCGCTAGTAGGGTCCGGGACGTATTACCTGAAGACC CACAAACAGGTGATGAAGGTGCAGAGTTCGTAGTCAGATTCAGAGAATCTGACGGATCAGTACTGGAAGATGAAGACGTA GTATTTCATGTGAGTTCAGATAGAGATACTGAAAATCTAGAACTGGATGATGATATCCGAGGAAGGGCTAGAGAAGAAAA TAGGGAAGTTTGGGAAATAGATGCAACCACTAATGATGATGGTGAAGTTATCTTTGAAGTTACTAGTGAAATCCCCGGTG AAGCCACTATTGAAATTGGTGAGTGGGATGATGATGATCGAGAAATGATTAGAACTGTAAGAAGGGGAACACGGGAAATA AACTTTCTTTCAGACGAAGTAACAGATCTGGAATTGGATGTAGACGAGCGACGTCCGCGAGTCGGCGAAGATTATATTCT GACTGTAGAGGCCTTGGATGGTAACTTCGAGGCCAGTGAAGATTTGGATATTATCATTGAAGAAGAAGAGGACGGCGAAG ACTTTGAAGAAATAGAAACTATTGAAACCGATGAAGATGGAATTGCAGAGCTCAGGTTGAATAAGACCGAGCGAGGCGAC TTTTGGTACAGAGCAATATATGAAGGTGGAGAAGATGATGTTTACTCCAATGAGCGACGCGTTCGGATCGATGAAGTAGG TGATATAGACGGTATAGAGGCCTATCGAGATACTAAATTCGTGGAAGATGGTCAGGATGAATTTAAAGTTTACTTTGCCA TTTATGATGAATATGACAACAAAGTTACTGAAGATGATGAAATTTCCATTGAAGTAACTGATCCCGATGGTGATACTTAC ACAGAAGATGATCGTGAGGTCTCGCTATCTGATGTGCGAGATGAAGATGATGACACTTATCAGATGTTTGAAGTAACTGT GGATCAAGATAGAATTGACCTGACCGGGGACTATGAAATAGAAGGTAGGGTTACTGGTACTACTCTTAGATCCATAGTAG ATGTAACCGTATCGGAATTTGGCGAACTTGACGATATTGAACTGGAACTGAGCCAAGAAGTGGCTCTATTGGACGAAGAC GACGATGAAGATATGTATGCCACAGTATATTTAGTAGATGATGATGGACTGAAAAAAGAATACGACTCTGATGATGAGGA TATTGTTTTTACCTCGGACAGCATCTCGGTAGCAAGAATCGGCAGTACTTCCGGTGAAATAAATATTCGAGACGGTGGAG AGACAAAAATTAGTGCATATCATGACGAAGAAGGGTATGAAGATACCGCTACTTTATCAGTATCGGGTGAAGCGGTAGAG ATAGAAGTGGAACCGGATATTGAAGAAGGAAACCTGTTCGGCGAAGTTGAGATGACCTTTATTGACGAAGATGGCAGAAG AGCTATCGGAGAAGAAGGTTATCGTTTAATTACACCTGATGATATTTCAGTTTATGATGAAGAAGATTTTGATTCTGGCC GTGCCACTTTCTCTGTGGAGGCCGATGATTATGATGTCTATGACCTAAGAGTTATTACTGATCAAGGGTTTGGGAGAAGT TTTGAATTAGAATTTACAGAAGAGGAAGAAGAAGAAAAGTTCGACCTGACTATTGTCGTGGAAGATCAGGATGGAAGTGT CATTGAAGATGCAGAAGTAGAAATCGATGGCCAGGACTATGAAACTGACATGATCGGTTACGCTGAAATTAGTGAAATCG AATCAGGATTTTATAGATACACAGTTGAAGCTGATGGCTATGATAGTTATGAAGACTCCATTTCAATAGATGATGATATG GAAGAAGCAGTTGTATTAGAAAAAGAAGAAGAGGAAGAAAAACCAGAGCCAGAACCAAGCAAGGAAATTATCATGAATTT GGATGATGAAAACTACACAGTAGATGGTGAGGATGAAGCTTTAGAAATAGCACCTCATGCCATTGAAGGTAGAACTTTCC TACCCTTTAGAGCTATCGGAGAAGCTCTGGGAGCCTATGTGGAATATGATGAAAGTGATCAATCTGTAACAGCCATGAGA GATGATAGGACAGTTGTTTTCTATCTGGAAGAAAAAACAGCTCAAGTAAACGATGAAGATTTAGAAATGGATACAGCACC CTTTGTTGATGACGATTCAGGAAGGACTTTGCTTCCAATTAGATTTTTTGCAGAGGCCTATGATGCTTATGTAGACTACG ATGAAACAACCCAAGAGATCACTATTGAAGAGTAA
Upstream 100 bases:
>100_bases AAAGTCGCTATGAAAACCTAAAAGATTTGCAATTATTTAATAGGCCTGTGTTTTGGGGGCCACTTTTCAATAACTAGTAA AAAATAAGGAGGAGTAGGGT
Downstream 100 bases:
>100_bases GAGGTATCTACTGATTATAACGAAAATAAAATTAAGTGTAGAATAAGCAGAATAATCCCCGCGTTATTAGGAGTCGTTTA GATTCCTATGATGCGGGGAT
Product: copper amine oxidase domain protein
Products: NA
Alternate protein names: Copper Amine Oxidase Domain-Containing Protein; Copper Amine Oxidase-Like Protein; Cell Wall Hydrolase/Autolysin; Copper Amine Oxidase N- Domain Family; Copper Amine Oxidase N- Domain Protein; Copper Amine Oxidase-Like
Number of amino acids: Translated: 784; Mature: 784
Protein sequence:
>784_residues MNQNGAKQSVFNVIAWILAPAIILTMASGVAMGQSLGDFSFAASRVRDVLPEDPQTGDEGAEFVVRFRESDGSVLEDEDV VFHVSSDRDTENLELDDDIRGRAREENREVWEIDATTNDDGEVIFEVTSEIPGEATIEIGEWDDDDREMIRTVRRGTREI NFLSDEVTDLELDVDERRPRVGEDYILTVEALDGNFEASEDLDIIIEEEEDGEDFEEIETIETDEDGIAELRLNKTERGD FWYRAIYEGGEDDVYSNERRVRIDEVGDIDGIEAYRDTKFVEDGQDEFKVYFAIYDEYDNKVTEDDEISIEVTDPDGDTY TEDDREVSLSDVRDEDDDTYQMFEVTVDQDRIDLTGDYEIEGRVTGTTLRSIVDVTVSEFGELDDIELELSQEVALLDED DDEDMYATVYLVDDDGLKKEYDSDDEDIVFTSDSISVARIGSTSGEINIRDGGETKISAYHDEEGYEDTATLSVSGEAVE IEVEPDIEEGNLFGEVEMTFIDEDGRRAIGEEGYRLITPDDISVYDEEDFDSGRATFSVEADDYDVYDLRVITDQGFGRS FELEFTEEEEEEKFDLTIVVEDQDGSVIEDAEVEIDGQDYETDMIGYAEISEIESGFYRYTVEADGYDSYEDSISIDDDM EEAVVLEKEEEEEKPEPEPSKEIIMNLDDENYTVDGEDEALEIAPHAIEGRTFLPFRAIGEALGAYVEYDESDQSVTAMR DDRTVVFYLEEKTAQVNDEDLEMDTAPFVDDDSGRTLLPIRFFAEAYDAYVDYDETTQEITIEE
Sequences:
>Translated_784_residues MNQNGAKQSVFNVIAWILAPAIILTMASGVAMGQSLGDFSFAASRVRDVLPEDPQTGDEGAEFVVRFRESDGSVLEDEDV VFHVSSDRDTENLELDDDIRGRAREENREVWEIDATTNDDGEVIFEVTSEIPGEATIEIGEWDDDDREMIRTVRRGTREI NFLSDEVTDLELDVDERRPRVGEDYILTVEALDGNFEASEDLDIIIEEEEDGEDFEEIETIETDEDGIAELRLNKTERGD FWYRAIYEGGEDDVYSNERRVRIDEVGDIDGIEAYRDTKFVEDGQDEFKVYFAIYDEYDNKVTEDDEISIEVTDPDGDTY TEDDREVSLSDVRDEDDDTYQMFEVTVDQDRIDLTGDYEIEGRVTGTTLRSIVDVTVSEFGELDDIELELSQEVALLDED DDEDMYATVYLVDDDGLKKEYDSDDEDIVFTSDSISVARIGSTSGEINIRDGGETKISAYHDEEGYEDTATLSVSGEAVE IEVEPDIEEGNLFGEVEMTFIDEDGRRAIGEEGYRLITPDDISVYDEEDFDSGRATFSVEADDYDVYDLRVITDQGFGRS FELEFTEEEEEEKFDLTIVVEDQDGSVIEDAEVEIDGQDYETDMIGYAEISEIESGFYRYTVEADGYDSYEDSISIDDDM EEAVVLEKEEEEEKPEPEPSKEIIMNLDDENYTVDGEDEALEIAPHAIEGRTFLPFRAIGEALGAYVEYDESDQSVTAMR DDRTVVFYLEEKTAQVNDEDLEMDTAPFVDDDSGRTLLPIRFFAEAYDAYVDYDETTQEITIEE >Mature_784_residues MNQNGAKQSVFNVIAWILAPAIILTMASGVAMGQSLGDFSFAASRVRDVLPEDPQTGDEGAEFVVRFRESDGSVLEDEDV VFHVSSDRDTENLELDDDIRGRAREENREVWEIDATTNDDGEVIFEVTSEIPGEATIEIGEWDDDDREMIRTVRRGTREI NFLSDEVTDLELDVDERRPRVGEDYILTVEALDGNFEASEDLDIIIEEEEDGEDFEEIETIETDEDGIAELRLNKTERGD FWYRAIYEGGEDDVYSNERRVRIDEVGDIDGIEAYRDTKFVEDGQDEFKVYFAIYDEYDNKVTEDDEISIEVTDPDGDTY TEDDREVSLSDVRDEDDDTYQMFEVTVDQDRIDLTGDYEIEGRVTGTTLRSIVDVTVSEFGELDDIELELSQEVALLDED DDEDMYATVYLVDDDGLKKEYDSDDEDIVFTSDSISVARIGSTSGEINIRDGGETKISAYHDEEGYEDTATLSVSGEAVE IEVEPDIEEGNLFGEVEMTFIDEDGRRAIGEEGYRLITPDDISVYDEEDFDSGRATFSVEADDYDVYDLRVITDQGFGRS FELEFTEEEEEEKFDLTIVVEDQDGSVIEDAEVEIDGQDYETDMIGYAEISEIESGFYRYTVEADGYDSYEDSISIDDDM EEAVVLEKEEEEEKPEPEPSKEIIMNLDDENYTVDGEDEALEIAPHAIEGRTFLPFRAIGEALGAYVEYDESDQSVTAMR DDRTVVFYLEEKTAQVNDEDLEMDTAPFVDDDSGRTLLPIRFFAEAYDAYVDYDETTQEITIEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 89139; Mature: 89139
Theoretical pI: Translated: 3.50; Mature: 3.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQNGAKQSVFNVIAWILAPAIILTMASGVAMGQSLGDFSFAASRVRDVLPEDPQTGDEG CCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCC AEFVVRFRESDGSVLEDEDVVFHVSSDRDTENLELDDDIRGRAREENREVWEIDATTNDD CEEEEEEECCCCCEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCC GEVIFEVTSEIPGEATIEIGEWDDDDREMIRTVRRGTREINFLSDEVTDLELDVDERRPR CCEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCEEEEEEHHHCCCC VGEDYILTVEALDGNFEASEDLDIIIEEEEDGEDFEEIETIETDEDGIAELRLNKTERGD CCCCEEEEEEEECCCCCCCCCCEEEEECCCCCCCHHHHHCCCCCCCCEEEEEECCCCCCC FWYRAIYEGGEDDVYSNERRVRIDEVGDIDGIEAYRDTKFVEDGQDEFKVYFAIYDEYDN EEEEEEECCCCCCCCCCCCEEEEECCCCCCCCHHHHCCCCCCCCCCCEEEEEEEEECCCC KVTEDDEISIEVTDPDGDTYTEDDREVSLSDVRDEDDDTYQMFEVTVDQDRIDLTGDYEI CCCCCCEEEEEEECCCCCCCCCCCCEEEHHHCCCCCCCCEEEEEEEECCCCEEECCCEEE EGRVTGTTLRSIVDVTVSEFGELDDIELELSQEVALLDEDDDEDMYATVYLVDDDGLKKE EEEEEHHHHHHHHHHHHHHCCCCCCEEEEECCEEEEECCCCCCCEEEEEEEECCCCCCCC YDSDDEDIVFTSDSISVARIGSTSGEINIRDGGETKISAYHDEEGYEDTATLSVSGEAVE CCCCCCCEEEECCCEEEEEECCCCCEEEEECCCCEEEEEEECCCCCCCEEEEEECCCEEE IEVEPDIEEGNLFGEVEMTFIDEDGRRAIGEEGYRLITPDDISVYDEEDFDSGRATFSVE EEECCCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEECCCCCEEECCCCCCCCCEEEEEE ADDYDVYDLRVITDQGFGRSFELEFTEEEEEEKFDLTIVVEDQDGSVIEDAEVEIDGQDY CCCCEEEEEEEEECCCCCCEEEEEECCCCCCCEEEEEEEEECCCCCEEECCEEEECCCCC ETDMIGYAEISEIESGFYRYTVEADGYDSYEDSISIDDDMEEAVVLEKEEEEEKPEPEPS CCCEECHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCHHEEEECCHHHCCCCCCCC KEIIMNLDDENYTVDGEDEALEIAPHAIEGRTFLPFRAIGEALGAYVEYDESDQSVTAMR HHEEEEECCCCEEECCCCCEEEECCEEECCCEECHHHHHHHHHCCEEEECCCCCEEEEEE DDRTVVFYLEEKTAQVNDEDLEMDTAPFVDDDSGRTLLPIRFFAEAYDAYVDYDETTQEI CCCEEEEEEECCCCCCCCCCCCCCCCCCEECCCCCEEEEHHHHHHHHHHHCCCCCCCCEE TIEE EECC >Mature Secondary Structure MNQNGAKQSVFNVIAWILAPAIILTMASGVAMGQSLGDFSFAASRVRDVLPEDPQTGDEG CCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCC AEFVVRFRESDGSVLEDEDVVFHVSSDRDTENLELDDDIRGRAREENREVWEIDATTNDD CEEEEEEECCCCCEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCC GEVIFEVTSEIPGEATIEIGEWDDDDREMIRTVRRGTREINFLSDEVTDLELDVDERRPR CCEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCEEEEEEHHHCCCC VGEDYILTVEALDGNFEASEDLDIIIEEEEDGEDFEEIETIETDEDGIAELRLNKTERGD CCCCEEEEEEEECCCCCCCCCCEEEEECCCCCCCHHHHHCCCCCCCCEEEEEECCCCCCC FWYRAIYEGGEDDVYSNERRVRIDEVGDIDGIEAYRDTKFVEDGQDEFKVYFAIYDEYDN EEEEEEECCCCCCCCCCCCEEEEECCCCCCCCHHHHCCCCCCCCCCCEEEEEEEEECCCC KVTEDDEISIEVTDPDGDTYTEDDREVSLSDVRDEDDDTYQMFEVTVDQDRIDLTGDYEI CCCCCCEEEEEEECCCCCCCCCCCCEEEHHHCCCCCCCCEEEEEEEECCCCEEECCCEEE EGRVTGTTLRSIVDVTVSEFGELDDIELELSQEVALLDEDDDEDMYATVYLVDDDGLKKE EEEEEHHHHHHHHHHHHHHCCCCCCEEEEECCEEEEECCCCCCCEEEEEEEECCCCCCCC YDSDDEDIVFTSDSISVARIGSTSGEINIRDGGETKISAYHDEEGYEDTATLSVSGEAVE CCCCCCCEEEECCCEEEEEECCCCCEEEEECCCCEEEEEEECCCCCCCEEEEEECCCEEE IEVEPDIEEGNLFGEVEMTFIDEDGRRAIGEEGYRLITPDDISVYDEEDFDSGRATFSVE EEECCCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEECCCCCEEECCCCCCCCCEEEEEE ADDYDVYDLRVITDQGFGRSFELEFTEEEEEEKFDLTIVVEDQDGSVIEDAEVEIDGQDY CCCCEEEEEEEEECCCCCCEEEEEECCCCCCCEEEEEEEEECCCCCEEECCEEEECCCCC ETDMIGYAEISEIESGFYRYTVEADGYDSYEDSISIDDDMEEAVVLEKEEEEEKPEPEPS CCCEECHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCHHEEEECCHHHCCCCCCCC KEIIMNLDDENYTVDGEDEALEIAPHAIEGRTFLPFRAIGEALGAYVEYDESDQSVTAMR HHEEEEECCCCEEECCCCCEEEECCEEECCCEECHHHHHHHHHCCEEEECCCCCEEEEEE DDRTVVFYLEEKTAQVNDEDLEMDTAPFVDDDSGRTLLPIRFFAEAYDAYVDYDETTQEI CCCEEEEEEECCCCCCCCCCCCCCCCCCEECCCCCEEEEHHHHHHHHHHHCCCCCCCCEE TIEE EECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA