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The map label for this gene is yehT [C]

Identifier: 188587075

GI number: 188587075

Start: 2654291

End: 2655046

Strand: Reverse

Name: yehT [C]

Synonym: Nther_2467

Alternate gene names: 188587075

Gene position: 2655046-2654291 (Counterclockwise)

Preceding gene: 188587082

Following gene: 188587074

Centisome position: 83.87

GC content: 29.76

Gene sequence:

>756_bases
ATGTGGAAAGCAGTTGTAGTTGATGATGAGCCTAAAATCCGTCGAGGGTTTGGAAGATGGATCCAAGAATATGGATATCC
TTTTAAATTTGTAGGATCGGCAGCTAATAGTCAAGAAACCCTGGAACTTACAGATAATAAAGATCCTCACTTCTTCTTTT
TAGATATTAGAATTGCTGAATCTAATGGGTTAGAATTGGCTAAATTAATTAAATCTAAAAACCCAAAAGCTATCTTAGTC
ATGGTAACAGGGTATGATTATTTTGAATATGCTCATGAAGCAATCAAGTTACAGGTATTTGATTACTTATTGAAACCTGT
TCCGAAAACAGACTTCTTTAAAACATTAGAAAATATTGATAAAGCCCTACGCATTCAATATCCAGATTTAGAAATTAACA
AAAATTACTATGAAAATAAAAACTATTCACTTTTAGTACAAAAGGTCATGGAACATATACATGACAATTATTACAAATCC
GATTTATCTTTGGAAAAAATAGCAAAAAATTTTAATATTAATAAAAGCTACCTAAGTACACTTATGAAAGAAGAGCTGGG
ATATTCATTTAAAGAATACCTTACTAGAGTTCGAATAAAAAAAGCAAAGGAACTGTTAAAAGAAGATCTACCAGGAATAA
AAATGTATGAAATAGTATTAAAAATTGGTTACCAAAGTCAACATTATTTCAGCCGCATTTTTAAAAAATATGAAGGGGTG
TCACCTCTTGATTATAGGAACAAGTATATAAAATGA

Upstream 100 bases:

>100_bases
CAGTTAGCATATGGTACTAGCTATGGTTTAAATATAGATGTAGAAAATGGTTGGACAAAAGTTACTATTAGATTTCCTTT
AGTGAAAGGAGAGGATTAAT

Downstream 100 bases:

>100_bases
TAAAGGAAGAGGTTGTCCCAAAAGTGTTTGAATCATTTAAGGGTTTATCCTCTAATTTTTTAAAGGCTTGACTCTATTAT
ACAAGCTTAAAGAAAAGTCA

Product: two component transcriptional regulator, AraC family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MWKAVVVDDEPKIRRGFGRWIQEYGYPFKFVGSAANSQETLELTDNKDPHFFFLDIRIAESNGLELAKLIKSKNPKAILV
MVTGYDYFEYAHEAIKLQVFDYLLKPVPKTDFFKTLENIDKALRIQYPDLEINKNYYENKNYSLLVQKVMEHIHDNYYKS
DLSLEKIAKNFNINKSYLSTLMKEELGYSFKEYLTRVRIKKAKELLKEDLPGIKMYEIVLKIGYQSQHYFSRIFKKYEGV
SPLDYRNKYIK

Sequences:

>Translated_251_residues
MWKAVVVDDEPKIRRGFGRWIQEYGYPFKFVGSAANSQETLELTDNKDPHFFFLDIRIAESNGLELAKLIKSKNPKAILV
MVTGYDYFEYAHEAIKLQVFDYLLKPVPKTDFFKTLENIDKALRIQYPDLEINKNYYENKNYSLLVQKVMEHIHDNYYKS
DLSLEKIAKNFNINKSYLSTLMKEELGYSFKEYLTRVRIKKAKELLKEDLPGIKMYEIVLKIGYQSQHYFSRIFKKYEGV
SPLDYRNKYIK
>Mature_251_residues
MWKAVVVDDEPKIRRGFGRWIQEYGYPFKFVGSAANSQETLELTDNKDPHFFFLDIRIAESNGLELAKLIKSKNPKAILV
MVTGYDYFEYAHEAIKLQVFDYLLKPVPKTDFFKTLENIDKALRIQYPDLEINKNYYENKNYSLLVQKVMEHIHDNYYKS
DLSLEKIAKNFNINKSYLSTLMKEELGYSFKEYLTRVRIKKAKELLKEDLPGIKMYEIVLKIGYQSQHYFSRIFKKYEGV
SPLDYRNKYIK

Specific function: Probable member of the two-component regulatory system SE_0166/SE_0165 [H]

COG id: COG4753

COG function: function code T; Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI87082052, Length=119, Percent_Identity=32.7731092436975, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1790391, Length=106, Percent_Identity=36.7924528301887, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018060
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00165 HTH_AraC; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 29862; Mature: 29862

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWKAVVVDDEPKIRRGFGRWIQEYGYPFKFVGSAANSQETLELTDNKDPHFFFLDIRIAE
CCEEEEECCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEECCCCCCEEEEEEEEEEC
SNGLELAKLIKSKNPKAILVMVTGYDYFEYAHEAIKLQVFDYLLKPVPKTDFFKTLENID
CCCHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
KALRIQYPDLEINKNYYENKNYSLLVQKVMEHIHDNYYKSDLSLEKIAKNFNINKSYLST
HHHEEECCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHH
LMKEELGYSFKEYLTRVRIKKAKELLKEDLPGIKMYEIVLKIGYQSQHYFSRIFKKYEGV
HHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCC
SPLDYRNKYIK
CCHHHHHCCCC
>Mature Secondary Structure
MWKAVVVDDEPKIRRGFGRWIQEYGYPFKFVGSAANSQETLELTDNKDPHFFFLDIRIAE
CCEEEEECCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEECCCCCCEEEEEEEEEEC
SNGLELAKLIKSKNPKAILVMVTGYDYFEYAHEAIKLQVFDYLLKPVPKTDFFKTLENID
CCCHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
KALRIQYPDLEINKNYYENKNYSLLVQKVMEHIHDNYYKSDLSLEKIAKNFNINKSYLST
HHHEEECCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHH
LMKEELGYSFKEYLTRVRIKKAKELLKEDLPGIKMYEIVLKIGYQSQHYFSRIFKKYEGV
HHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCC
SPLDYRNKYIK
CCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12950922 [H]