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The map label for this gene is yqjE [H]

Identifier: 188587001

GI number: 188587001

Start: 2557444

End: 2558652

Strand: Reverse

Name: yqjE [H]

Synonym: Nther_2393

Alternate gene names: 188587001

Gene position: 2558652-2557444 (Counterclockwise)

Preceding gene: 188587002

Following gene: 188586995

Centisome position: 80.83

GC content: 42.1

Gene sequence:

>1209_bases
ATGATTGATTTTGAGCTTTATAAGATTTTACAAAATAAGAATGTAGCTAGAGCTTTAAAGTTCATTGAAAAAGATGCTAA
AAGAACTTTAGAAGAACAGACACAACTTTGTGAGATACCTGCACCAACTTTTGAAGAAGAAAAACGCGGTAAATATTATT
ATCAGCTTATGTCCCAGTTAGGCTTAGACGAAGTTAAAATAGACGAATATAATAATGTGATTGGAATTTTAAAAGGAAGA
CAGGAACAACCTGGAATTATAACTATGGCTCACTTAGACACGGTTTTTCCCCAGGAAACTGATGTATCAGTCAAAAATAT
AGATGGAATTTTGTATGCTCCAGGAATCTCAGATAATTGTAGAAACCTGGCAGCCCAGTTATCAATTATCAGGGCTTTTA
AAGAAGCAGGTATCAGGCCGGAAACAGATATCATATTTGTGGGAAATGTTTGTGAAGAAGGATTAGGAGATTTAAAGGGT
TCAAAAGTTATCATGGAATCATATCCCCAGGTCCAGGGTGTGGTGGCCCTAGATGGAACTGGCATGGGTACTGGCAGTAT
AGTCTATGGAGCCACTGGAAGTAAAAGATATGAGGTGACTTTTATGGGACCTGGGGGGCACAGTTTTGGTGCATTTGGAG
AACCTAGTGCCATTCATGCCCTGGGTAGGGCTATTTCAAAAATTTCAAGCTTGGAGGTTCCCCAAGAGCCTAAGACCACT
TTTAATGTGGGGACTATCTCAGGTGGCACCTCAGTGAATACTATCGCAGCAGAAGCTTCCATGCTGGTAGATTTGCGGTC
CAATGGGGAACAAGAACTGGCCGATTTAGAACGAGAGGTCTTGGAAATAATTCAAAAATCCAAAGAAGAAGAAAATGCCC
GCATTAAAAAGGATGACCAAGAAAACCAGTTGAAAGTGGAAAACAAATTGGTCGGTGACCGCCCTGCTGGGATGCAAGAT
CCCAACATTCTCATTGTTCGAGCAGCTGTGGCGGCAACTAGCGCTCTGGAAATAGAACCACGTCTTACTGGAGCGGGTAG
TACTGATGCCAATATTCCAATAAGCATGGGTATCCCCGCTGTTTGTCTTTCAGGAGGCGGACAGGGTGGGAGTGCTCACA
CCCTGGAAGAGTGGTTTGATCCCACAAATGCTCATATAGGCGTACAGAGGGTATTTTTGCTATTGGTTTATTTGAGTAAT
GCCACCTAA

Upstream 100 bases:

>100_bases
GAACCAGTCCGTCACACATTCTCGTGACTTGTCATGAGAGATGCACAATTAAAGTAGATATAAGCGTTGAGATCCGAAAG
AGTGAGGAGTGAAGATAATT

Downstream 100 bases:

>100_bases
ATGATAATTGTGAAGACAATTCAAAACTGCTAGGTAAATTAATACGAGACGCAAATTGAGAGTTGGGATATATAAAACAA
CTGGGCTGCCAGAGTGGTTC

Product: peptidase dimerisation domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MIDFELYKILQNKNVARALKFIEKDAKRTLEEQTQLCEIPAPTFEEEKRGKYYYQLMSQLGLDEVKIDEYNNVIGILKGR
QEQPGIITMAHLDTVFPQETDVSVKNIDGILYAPGISDNCRNLAAQLSIIRAFKEAGIRPETDIIFVGNVCEEGLGDLKG
SKVIMESYPQVQGVVALDGTGMGTGSIVYGATGSKRYEVTFMGPGGHSFGAFGEPSAIHALGRAISKISSLEVPQEPKTT
FNVGTISGGTSVNTIAAEASMLVDLRSNGEQELADLEREVLEIIQKSKEEENARIKKDDQENQLKVENKLVGDRPAGMQD
PNILIVRAAVAATSALEIEPRLTGAGSTDANIPISMGIPAVCLSGGGQGGSAHTLEEWFDPTNAHIGVQRVFLLLVYLSN
AT

Sequences:

>Translated_402_residues
MIDFELYKILQNKNVARALKFIEKDAKRTLEEQTQLCEIPAPTFEEEKRGKYYYQLMSQLGLDEVKIDEYNNVIGILKGR
QEQPGIITMAHLDTVFPQETDVSVKNIDGILYAPGISDNCRNLAAQLSIIRAFKEAGIRPETDIIFVGNVCEEGLGDLKG
SKVIMESYPQVQGVVALDGTGMGTGSIVYGATGSKRYEVTFMGPGGHSFGAFGEPSAIHALGRAISKISSLEVPQEPKTT
FNVGTISGGTSVNTIAAEASMLVDLRSNGEQELADLEREVLEIIQKSKEEENARIKKDDQENQLKVENKLVGDRPAGMQD
PNILIVRAAVAATSALEIEPRLTGAGSTDANIPISMGIPAVCLSGGGQGGSAHTLEEWFDPTNAHIGVQRVFLLLVYLSN
AT
>Mature_402_residues
MIDFELYKILQNKNVARALKFIEKDAKRTLEEQTQLCEIPAPTFEEEKRGKYYYQLMSQLGLDEVKIDEYNNVIGILKGR
QEQPGIITMAHLDTVFPQETDVSVKNIDGILYAPGISDNCRNLAAQLSIIRAFKEAGIRPETDIIFVGNVCEEGLGDLKG
SKVIMESYPQVQGVVALDGTGMGTGSIVYGATGSKRYEVTFMGPGGHSFGAFGEPSAIHALGRAISKISSLEVPQEPKTT
FNVGTISGGTSVNTIAAEASMLVDLRSNGEQELADLEREVLEIIQKSKEEENARIKKDDQENQLKVENKLVGDRPAGMQD
PNILIVRAAVAATSALEIEPRLTGAGSTDANIPISMGIPAVCLSGGGQGGSAHTLEEWFDPTNAHIGVQRVFLLLVYLSN
AT

Specific function: Could be a peptidase [H]

COG id: COG2195

COG function: function code E; Di- and tripeptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20A family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001261
- InterPro:   IPR010162
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: NA

Molecular weight: Translated: 43488; Mature: 43488

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDFELYKILQNKNVARALKFIEKDAKRTLEEQTQLCEIPAPTFEEEKRGKYYYQLMSQL
CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHC
GLDEVKIDEYNNVIGILKGRQEQPGIITMAHLDTVFPQETDVSVKNIDGILYAPGISDNC
CCCEEEECCCCCEEEEECCCCCCCCEEEEEEHHHHCCCCCCCCCCCCCEEEECCCCCHHH
RNLAAQLSIIRAFKEAGIRPETDIIFVGNVCEEGLGDLKGSKVIMESYPQVQGVVALDGT
HHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHCCCCEEHHHCCCCCCEEEEECCC
GMGTGSIVYGATGSKRYEVTFMGPGGHSFGAFGEPSAIHALGRAISKISSLEVPQEPKTT
CCCCCCEEECCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCE
FNVGTISGGTSVNTIAAEASMLVDLRSNGEQELADLEREVLEIIQKSKEEENARIKKDDQ
EEEEEECCCCCCHHHHHHHHHEEEHHCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCC
ENQLKVENKLVGDRPAGMQDPNILIVRAAVAATSALEIEPRLTGAGSTDANIPISMGIPA
CCCEEHHHHHCCCCCCCCCCCCEEEEEEHHHHCCEEEECCCCCCCCCCCCCCEEECCCCE
VCLSGGGQGGSAHTLEEWFDPTNAHIGVQRVFLLLVYLSNAT
EEECCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIDFELYKILQNKNVARALKFIEKDAKRTLEEQTQLCEIPAPTFEEEKRGKYYYQLMSQL
CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHC
GLDEVKIDEYNNVIGILKGRQEQPGIITMAHLDTVFPQETDVSVKNIDGILYAPGISDNC
CCCEEEECCCCCEEEEECCCCCCCCEEEEEEHHHHCCCCCCCCCCCCCEEEECCCCCHHH
RNLAAQLSIIRAFKEAGIRPETDIIFVGNVCEEGLGDLKGSKVIMESYPQVQGVVALDGT
HHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHCCCCEEHHHCCCCCCEEEEECCC
GMGTGSIVYGATGSKRYEVTFMGPGGHSFGAFGEPSAIHALGRAISKISSLEVPQEPKTT
CCCCCCEEECCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCE
FNVGTISGGTSVNTIAAEASMLVDLRSNGEQELADLEREVLEIIQKSKEEENARIKKDDQ
EEEEEECCCCCCHHHHHHHHHEEEHHCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCC
ENQLKVENKLVGDRPAGMQDPNILIVRAAVAATSALEIEPRLTGAGSTDANIPISMGIPA
CCCEEHHHHHCCCCCCCCCCCCEEEEEEHHHHCCEEEECCCCCCCCCCCCCCEEECCCCE
VCLSGGGQGGSAHTLEEWFDPTNAHIGVQRVFLLLVYLSNAT
EEECCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]