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The map label for this gene is ngr [H]

Identifier: 188586977

GI number: 188586977

Start: 2524619

End: 2525167

Strand: Direct

Name: ngr [H]

Synonym: Nther_2369

Alternate gene names: 188586977

Gene position: 2524619-2525167 (Clockwise)

Preceding gene: 188586976

Following gene: 188586982

Centisome position: 79.75

GC content: 43.72

Gene sequence:

>549_bases
GTGGAGAACAATATTACTGCCAACAAGGTAAGATCTGCTTTTGGTGGCGAAAGCCAGGCTTATCAACGCTATAAAGTCTG
GGGCAGAAAAGCCGAAGATGAAGGCTATCCGAACGTAGCCAGATTGTTTTATGGAATTGCCTATGCTGAAGAAGTTCACG
CCGGAAACCATTTTGAAGTACTGGGTGATGTAAAAGGTGATTTTCTAGTGGCTTCAATGGCTGGTTTCGGCCTAGGAGAT
ACTAAAGAAAACCTGGAAGGTGCCAAGGAAGGCGAAGATTTTGAAATTCATGAAATGTATCCTGCTTATCTGAGAGTAGC
TGAGATGCAAAATGAAAAAGGTGCCATCCGAAGCTTTAAGTGGGCCCTAGAAGCAGAAAAAGCCCATTCTGAGTTGTTCC
AGAGAGCTATAGACTCAGTTAGCAATGGAAACGACATTGACATTGACGAAGTAAGTGTTTGCGGCAAATGTGGCTATACA
ACCACTGAAGGTGTACCTGATTACTGTCCTATCTGCGGAGCTCCCAGGAATAGATTCAAAAGCTATTAG

Upstream 100 bases:

>100_bases
TTGCGAATAACTAGTAAACTATAGTAAAATATTAGTAAACGCAATGAGTTTTAATTATTAATAAACTTAATTGCTAACAT
TAATTCAGGAGGGATCGTCT

Downstream 100 bases:

>100_bases
TTCAAGCTACAATATTGAACATAAAAACCCCGTCATATATGACGGGGTTTTTGTTTATTCTATAATTATATTTTCTAAAT
ATTGATCAACAAAGGGACTT

Product: Rubrerythrin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MENNITANKVRSAFGGESQAYQRYKVWGRKAEDEGYPNVARLFYGIAYAEEVHAGNHFEVLGDVKGDFLVASMAGFGLGD
TKENLEGAKEGEDFEIHEMYPAYLRVAEMQNEKGAIRSFKWALEAEKAHSELFQRAIDSVSNGNDIDIDEVSVCGKCGYT
TTEGVPDYCPICGAPRNRFKSY

Sequences:

>Translated_182_residues
MENNITANKVRSAFGGESQAYQRYKVWGRKAEDEGYPNVARLFYGIAYAEEVHAGNHFEVLGDVKGDFLVASMAGFGLGD
TKENLEGAKEGEDFEIHEMYPAYLRVAEMQNEKGAIRSFKWALEAEKAHSELFQRAIDSVSNGNDIDIDEVSVCGKCGYT
TTEGVPDYCPICGAPRNRFKSY
>Mature_182_residues
MENNITANKVRSAFGGESQAYQRYKVWGRKAEDEGYPNVARLFYGIAYAEEVHAGNHFEVLGDVKGDFLVASMAGFGLGD
TKENLEGAKEGEDFEIHEMYPAYLRVAEMQNEKGAIRSFKWALEAEKAHSELFQRAIDSVSNGNDIDIDEVSVCGKCGYT
TTEGVPDYCPICGAPRNRFKSY

Specific function: Exhibits NADH peroxidase activity (in vitro) [H]

COG id: COG1592

COG function: function code C; Rubrerythrin

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rubredoxin-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009040
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR004039
- InterPro:   IPR003251 [H]

Pfam domain/function: PF02915 Rubrerythrin [H]

EC number: NA

Molecular weight: Translated: 20245; Mature: 20245

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: PS50903 RUBREDOXIN_LIKE ; PS50905 FERRITIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENNITANKVRSAFGGESQAYQRYKVWGRKAEDEGYPNVARLFYGIAYAEEVHAGNHFEV
CCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEE
LGDVKGDFLVASMAGFGLGDTKENLEGAKEGEDFEIHEMYPAYLRVAEMQNEKGAIRSFK
ECCCCCCEEHHHHHCCCCCCCHHHHCCCCCCCCEEHHHHHHHHHHHHHHCCCCCHHHHHH
WALEAEKAHSELFQRAIDSVSNGNDIDIDEVSVCGKCGYTTTEGVPDYCPICGAPRNRFK
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCC
SY
CC
>Mature Secondary Structure
MENNITANKVRSAFGGESQAYQRYKVWGRKAEDEGYPNVARLFYGIAYAEEVHAGNHFEV
CCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEE
LGDVKGDFLVASMAGFGLGDTKENLEGAKEGEDFEIHEMYPAYLRVAEMQNEKGAIRSFK
ECCCCCCEEHHHHHCCCCCCCHHHHCCCCCCCCEEHHHHHHHHHHHHHHCCCCCHHHHHH
WALEAEKAHSELFQRAIDSVSNGNDIDIDEVSVCGKCGYTTTEGVPDYCPICGAPRNRFK
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCC
SY
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9226272; 8383040 [H]