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The map label for this gene is ydjX [C]

Identifier: 188586908

GI number: 188586908

Start: 2444058

End: 2444699

Strand: Reverse

Name: ydjX [C]

Synonym: Nther_2299

Alternate gene names: 188586908

Gene position: 2444699-2444058 (Counterclockwise)

Preceding gene: 188586909

Following gene: 188586906

Centisome position: 77.23

GC content: 41.74

Gene sequence:

>642_bases
TTGAAGCGAATAATTATGATCTCATCCATTGTACTCATAGGAGGAGCAGCTTATGTCTTTGCTGCAATAGAAGGGTTGAC
ACCAGAAAAATTGCGAGAAATTTTATTTCGGTGGCAGGGAGCAGCTCCGGCAATTTTCGTGGCAATGCACACCCTAAGAC
CATTAACTCTGCTTCCATCGTCACTTTTGGTTTTTTTAGCTTCCCTATATTTTGATTTTTGGACTGGTTTAATGTTGAAT
ATTGCAGGATTATTTTTAAATATGAGTTTGGCCTACTTTCTTGGAAAGTATCTAGGACATGAATGGTTAAAGAGTAAATT
TCCTGCCAGTAAAAAAGTTATTATGACACTGAACAGCGGGAGTTGGCCCCTCTTAGCCAGTGTCAGGATGGTACCTATTT
TCCCGGCAGATCTAGTAAGTTATACATGTGGGGTTTGCAGTATTTCGTATCTTCCCTATATTACAGGTTCAGTGGTAGGT
TCTATTCCGGGCTTGACCGTGGTCATGGCGGCAGGTACCGGAATAAGAGGAGGGGAGCTGTTACATCTGCTCCCCTTGTC
CTTAATTATGATTTTATTGGCCATTTGGGCCTGGAGAAAAATTATTGTGGTAAGGTGGGGAAACTATAACCTTCGAAGCT
GA

Upstream 100 bases:

>100_bases
GATAACTGTAATAAATTATCAATTTCACTTAAAGATGATTAGGTTTGGTACATCTAGGGTTTATTATAATTAATTAGCTA
ATGTGAAAAGGGTGTCTGAA

Downstream 100 bases:

>100_bases
GCTCTCTCAGAATTTCTGAGAGGGCTTTTTTAGTGTTTTCTCTACTTGCTGAATCGTGCATCAATACAACAGCTCCATTA
CTGCCTCGCACTCCACCCAG

Product: SNARE associated Golgi protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MKRIIMISSIVLIGGAAYVFAAIEGLTPEKLREILFRWQGAAPAIFVAMHTLRPLTLLPSSLLVFLASLYFDFWTGLMLN
IAGLFLNMSLAYFLGKYLGHEWLKSKFPASKKVIMTLNSGSWPLLASVRMVPIFPADLVSYTCGVCSISYLPYITGSVVG
SIPGLTVVMAAGTGIRGGELLHLLPLSLIMILLAIWAWRKIIVVRWGNYNLRS

Sequences:

>Translated_213_residues
MKRIIMISSIVLIGGAAYVFAAIEGLTPEKLREILFRWQGAAPAIFVAMHTLRPLTLLPSSLLVFLASLYFDFWTGLMLN
IAGLFLNMSLAYFLGKYLGHEWLKSKFPASKKVIMTLNSGSWPLLASVRMVPIFPADLVSYTCGVCSISYLPYITGSVVG
SIPGLTVVMAAGTGIRGGELLHLLPLSLIMILLAIWAWRKIIVVRWGNYNLRS
>Mature_213_residues
MKRIIMISSIVLIGGAAYVFAAIEGLTPEKLREILFRWQGAAPAIFVAMHTLRPLTLLPSSLLVFLASLYFDFWTGLMLN
IAGLFLNMSLAYFLGKYLGHEWLKSKFPASKKVIMTLNSGSWPLLASVRMVPIFPADLVSYTCGVCSISYLPYITGSVVG
SIPGLTVVMAAGTGIRGGELLHLLPLSLIMILLAIWAWRKIIVVRWGNYNLRS

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23466; Mature: 23466

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRIIMISSIVLIGGAAYVFAAIEGLTPEKLREILFRWQGAAPAIFVAMHTLRPLTLLPS
CCEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHH
SLLVFLASLYFDFWTGLMLNIAGLFLNMSLAYFLGKYLGHEWLKSKFPASKKVIMTLNSG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC
SWPLLASVRMVPIFPADLVSYTCGVCSISYLPYITGSVVGSIPGLTVVMAAGTGIRGGEL
CCCHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHH
LHLLPLSLIMILLAIWAWRKIIVVRWGNYNLRS
HHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCC
>Mature Secondary Structure
MKRIIMISSIVLIGGAAYVFAAIEGLTPEKLREILFRWQGAAPAIFVAMHTLRPLTLLPS
CCEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHH
SLLVFLASLYFDFWTGLMLNIAGLFLNMSLAYFLGKYLGHEWLKSKFPASKKVIMTLNSG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC
SWPLLASVRMVPIFPADLVSYTCGVCSISYLPYITGSVVGSIPGLTVVMAAGTGIRGGEL
CCCHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHH
LHLLPLSLIMILLAIWAWRKIIVVRWGNYNLRS
HHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA