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The map label for this gene is 188586874

Identifier: 188586874

GI number: 188586874

Start: 2409569

End: 2410570

Strand: Reverse

Name: 188586874

Synonym: Nther_2265

Alternate gene names: NA

Gene position: 2410570-2409569 (Counterclockwise)

Preceding gene: 188586876

Following gene: 188586873

Centisome position: 76.15

GC content: 37.92

Gene sequence:

>1002_bases
ATGTCAGGAATTATATCAAAACTTAAAAACAGCTTATGGGAAGACAATATCAAAAAAATGGTTCTAAAAGTGGGCAAAGT
CCTGTTTTTAATTATAGTTGCCCTAGTTATCATTCAACATATACCCCAATTAATAGGAAATCTCAAAATAATATCACCCT
GGACCATTGCTTCTGTGTTGATTTTACAGCTAATAACTTTAGTCTTGGTAGCCTATCAATGGCGCCTTTGTTCAGGAGTT
TTTGAACACAGGGAAATAGGGCGAATACGAGATTTTTGGATAATCAACAGCTACGGTACCCTGTTGGAAGGGGTGACCCC
GGCAGCCAAAACAGGTGGGGAAGGTCTAAAAGCAGTAATGATAAGCAGAAACCTTCACTATTCGAAAGAAGAGGCAATCC
TCTTGGTTCTTTGCCATAAAATCATCAGTATGGGAAGCTTTTTTGTTGTCATGGCTGCCTTTTATTACGGCTTATTCATG
GCAATTCCTAGGTTTTTACTTGATAAACCAGTGATCGTTACACTTCTATCTATACTGGCCTTGGTACTAATAATCCTTTG
CCTGCTTCCTAAGATTAAACAAAGGATTAGTACTGATTCTTGGTTAAACATGGTTCTTGAAAAATCCGGTTTTTTTATCA
GATTGTTTTGGAAGCATAAACTGCTTGTAACTTCTGCCTTTGTCATTGGTCTAATAATTTGGTTCCTACTGGGCGTAAAA
TCTTATCTTATCAGTCTGGGAATGGGTGTTGAGCTCTCCTTTTTACAGGTAACCAATGCCACTTTTATTGGTTATTTATT
TGGAATGATTCCGGTGAGTCCAGGAGGTTTGGGTACTTACGAAGGTGCTATGACAGTACAGTTATATCGCATGGGGCTTT
CTCGAGGCCTGGGCTTTAGTTTGAGTTTATTGAGTAGATTAACTACTTTCTGGTTTACCCTGTTGGTCTCATTTATTTCA
GTAACAATAGCCAATTTGATTTCTTCGACCATAAAAAAATAG

Upstream 100 bases:

>100_bases
TTGAACCGCATAAACCGTTCAATTGAAAATTATACAGTGTCAACAACTAAATATAACAGTGCCATGGAAAAAAGATAGTC
TTAGATGGGACGGGATAACT

Downstream 100 bases:

>100_bases
ATAAAAGTTACAGGAATTTTGTGCTAAATTGTAGAAATAAATAGAAGCTGGTAGATGAGATAAGAAATCATTACTAATAT
TTTTTATTTGAATTAGAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 332

Protein sequence:

>333_residues
MSGIISKLKNSLWEDNIKKMVLKVGKVLFLIIVALVIIQHIPQLIGNLKIISPWTIASVLILQLITLVLVAYQWRLCSGV
FEHREIGRIRDFWIINSYGTLLEGVTPAAKTGGEGLKAVMISRNLHYSKEEAILLVLCHKIISMGSFFVVMAAFYYGLFM
AIPRFLLDKPVIVTLLSILALVLIILCLLPKIKQRISTDSWLNMVLEKSGFFIRLFWKHKLLVTSAFVIGLIIWFLLGVK
SYLISLGMGVELSFLQVTNATFIGYLFGMIPVSPGGLGTYEGAMTVQLYRMGLSRGLGFSLSLLSRLTTFWFTLLVSFIS
VTIANLISSTIKK

Sequences:

>Translated_333_residues
MSGIISKLKNSLWEDNIKKMVLKVGKVLFLIIVALVIIQHIPQLIGNLKIISPWTIASVLILQLITLVLVAYQWRLCSGV
FEHREIGRIRDFWIINSYGTLLEGVTPAAKTGGEGLKAVMISRNLHYSKEEAILLVLCHKIISMGSFFVVMAAFYYGLFM
AIPRFLLDKPVIVTLLSILALVLIILCLLPKIKQRISTDSWLNMVLEKSGFFIRLFWKHKLLVTSAFVIGLIIWFLLGVK
SYLISLGMGVELSFLQVTNATFIGYLFGMIPVSPGGLGTYEGAMTVQLYRMGLSRGLGFSLSLLSRLTTFWFTLLVSFIS
VTIANLISSTIKK
>Mature_332_residues
SGIISKLKNSLWEDNIKKMVLKVGKVLFLIIVALVIIQHIPQLIGNLKIISPWTIASVLILQLITLVLVAYQWRLCSGVF
EHREIGRIRDFWIINSYGTLLEGVTPAAKTGGEGLKAVMISRNLHYSKEEAILLVLCHKIISMGSFFVVMAAFYYGLFMA
IPRFLLDKPVIVTLLSILALVLIILCLLPKIKQRISTDSWLNMVLEKSGFFIRLFWKHKLLVTSAFVIGLIIWFLLGVKS
YLISLGMGVELSFLQVTNATFIGYLFGMIPVSPGGLGTYEGAMTVQLYRMGLSRGLGFSLSLLSRLTTFWFTLLVSFISV
TIANLISSTIKK

Specific function: Unknown

COG id: COG0392

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0104 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022791
- InterPro:   IPR005242 [H]

Pfam domain/function: PF03706 UPF0104 [H]

EC number: NA

Molecular weight: Translated: 37225; Mature: 37094

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGIISKLKNSLWEDNIKKMVLKVGKVLFLIIVALVIIQHIPQLIGNLKIISPWTIASVL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHH
ILQLITLVLVAYQWRLCSGVFEHREIGRIRDFWIINSYGTLLEGVTPAAKTGGEGLKAVM
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEECCHHHHHHCCCCHHHCCCCHHHHHH
ISRNLHYSKEEAILLVLCHKIISMGSFFVVMAAFYYGLFMAIPRFLLDKPVIVTLLSILA
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LVLIILCLLPKIKQRISTDSWLNMVLEKSGFFIRLFWKHKLLVTSAFVIGLIIWFLLGVK
HHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
SYLISLGMGVELSFLQVTNATFIGYLFGMIPVSPGGLGTYEGAMTVQLYRMGLSRGLGFS
HHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCHH
LSLLSRLTTFWFTLLVSFISVTIANLISSTIKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SGIISKLKNSLWEDNIKKMVLKVGKVLFLIIVALVIIQHIPQLIGNLKIISPWTIASVL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHH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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]