| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is yheD [H]
Identifier: 188586835
GI number: 188586835
Start: 2364900
End: 2366273
Strand: Reverse
Name: yheD [H]
Synonym: Nther_2226
Alternate gene names: 188586835
Gene position: 2366273-2364900 (Counterclockwise)
Preceding gene: 188586836
Following gene: 188586834
Centisome position: 74.75
GC content: 28.75
Gene sequence:
>1374_bases TTGTTAATAGGTATCTATCATGGTAAAAAATCTCCTTTTGATGTTCAAAGGTACGAAATATTATATACCTTAACTGCAAG GGCTAAAATGGAAGGCGATGAAATCATAATTTTTGATAATAGTGGTGTGGATTTGGAAAATGAAACAATTTGCGGTCATG TAAGGAAAGATGGTATCTGGATAAAAGAGAAAACTTTGTTTCCAGAAGTTATTATTAATGTCTCACCACCTTCTGCAAAA GATCGTACTGAGATTGAGAAATCGTTAAGGAAAAAGATTCCTTTCACTAAAAATTTAATACATGATAAACTCGGCTTCTA TGTATTAATGAATAAAACAGGAAAATACACTAAATACTTAATACCCACCAAAAAAGTAGACAGTATAAAAACAATTGAAG AATTTATAAATAATTATCAAACAGTGATAATAAAACCCTCTAAAGGGAGACAGGGAAAAGGTGTCATATATATTGAAAAG AAAAAAGACCATTACTTACTTATAAAGGACCAAGGAAAAAAACACTTACACAAAAAAGAATTCATAAAATTTGCGAATAA ATTAATAGCTAAAAAATACTTAGTTCAGAAGTATGTATATTGTAGAACAGAAGAAGGGTTCCCTTTTGACTTTAGAATTG TAACTCAACGAGATGGAAAAGGCAACTGGGTTTTGGCCACCTCTTATGCCAGAATAGGAAAGGATAGGAGTTTAGTGACA GCTAATATCAGTAGAGGTGGAATGGTTGCCAACTTCAAACATACACTAATTAAAGAATTGGGATTAAAAAAAGCTGATAA ATATGAAGAATATATACAACAATTAGCTTTAAATATATCAAAACATGTAAACAAATTATATAAACATGAAATAGATGAAC TGGGAGTTGATATTGCTGTAGATAATAATGAAAATATATGGTTATTTGAAGTTAATACAGGACCTAGTAATTCAACAATT CAATGGGAGACAACTCCGAATAAATTAGCTTATGCAAAGTATTTAGCATATCTGAATAGGATAAACAAATTAAAAAAAGT CGATAAAATTATTAGTAATATAGTGAAAGGTCTAGTACAAATAGAAGATGATTTAGAAAATGGGAATTTAGAAAAAGCTG TTAATTTAACTCCAAGTTTATTAAAAGGTTTTTCCAGTATAGACAGAACTATAATGTCCTTTACAACAGAACCTAATACA AATATATATGATAGTACAAATAAAATTAGAGAAGGATTCTCTAATTTAGTATATGCTTATGAGAACAGTAATTTAGCGAA TGCAAAAGAAACTGTTGATTATCAACTAGTACCAAATTTTCAAGAACTAAGCTCTAAAATACAAGAAATTTTGAGAGAAA ATGAACATTGTTAA
Upstream 100 bases:
>100_bases TTCGACAAAAAGAGCTAATCAGGGCTGACCTCCCATTATAAATTTTGGGGGGTTAAGTTTTTGGCATTTCTAAGCTGATT AAATGTAGGAGGTAATAATT
Downstream 100 bases:
>100_bases TCTTAAAGTAAGAGTTTTGGTTTTAATTTATATCCATGCGATTTTATAGAAGATACCGTTTATTATTTATTTAATTCAAA TTAATTTAAAATTAAGAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 457; Mature: 457
Protein sequence:
>457_residues MLIGIYHGKKSPFDVQRYEILYTLTARAKMEGDEIIIFDNSGVDLENETICGHVRKDGIWIKEKTLFPEVIINVSPPSAK DRTEIEKSLRKKIPFTKNLIHDKLGFYVLMNKTGKYTKYLIPTKKVDSIKTIEEFINNYQTVIIKPSKGRQGKGVIYIEK KKDHYLLIKDQGKKHLHKKEFIKFANKLIAKKYLVQKYVYCRTEEGFPFDFRIVTQRDGKGNWVLATSYARIGKDRSLVT ANISRGGMVANFKHTLIKELGLKKADKYEEYIQQLALNISKHVNKLYKHEIDELGVDIAVDNNENIWLFEVNTGPSNSTI QWETTPNKLAYAKYLAYLNRINKLKKVDKIISNIVKGLVQIEDDLENGNLEKAVNLTPSLLKGFSSIDRTIMSFTTEPNT NIYDSTNKIREGFSNLVYAYENSNLANAKETVDYQLVPNFQELSSKIQEILRENEHC
Sequences:
>Translated_457_residues MLIGIYHGKKSPFDVQRYEILYTLTARAKMEGDEIIIFDNSGVDLENETICGHVRKDGIWIKEKTLFPEVIINVSPPSAK DRTEIEKSLRKKIPFTKNLIHDKLGFYVLMNKTGKYTKYLIPTKKVDSIKTIEEFINNYQTVIIKPSKGRQGKGVIYIEK KKDHYLLIKDQGKKHLHKKEFIKFANKLIAKKYLVQKYVYCRTEEGFPFDFRIVTQRDGKGNWVLATSYARIGKDRSLVT ANISRGGMVANFKHTLIKELGLKKADKYEEYIQQLALNISKHVNKLYKHEIDELGVDIAVDNNENIWLFEVNTGPSNSTI QWETTPNKLAYAKYLAYLNRINKLKKVDKIISNIVKGLVQIEDDLENGNLEKAVNLTPSLLKGFSSIDRTIMSFTTEPNT NIYDSTNKIREGFSNLVYAYENSNLANAKETVDYQLVPNFQELSSKIQEILRENEHC >Mature_457_residues MLIGIYHGKKSPFDVQRYEILYTLTARAKMEGDEIIIFDNSGVDLENETICGHVRKDGIWIKEKTLFPEVIINVSPPSAK DRTEIEKSLRKKIPFTKNLIHDKLGFYVLMNKTGKYTKYLIPTKKVDSIKTIEEFINNYQTVIIKPSKGRQGKGVIYIEK KKDHYLLIKDQGKKHLHKKEFIKFANKLIAKKYLVQKYVYCRTEEGFPFDFRIVTQRDGKGNWVLATSYARIGKDRSLVT ANISRGGMVANFKHTLIKELGLKKADKYEEYIQQLALNISKHVNKLYKHEIDELGVDIAVDNNENIWLFEVNTGPSNSTI QWETTPNKLAYAKYLAYLNRINKLKKVDKIISNIVKGLVQIEDDLENGNLEKAVNLTPSLLKGFSSIDRTIMSFTTEPNT NIYDSTNKIREGFSNLVYAYENSNLANAKETVDYQLVPNFQELSSKIQEILRENEHC
Specific function: Involved in sporulation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Forespore outer membrane; Peripheral membrane protein. Spore wall, spore coat. Note=Forms two rings around the forespore that are offset from its midpoint, before it eventually redistributes to form a shell around the developing spore [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the yheC/yheD family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013816 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52695; Mature: 52695
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIGIYHGKKSPFDVQRYEILYTLTARAKMEGDEIIIFDNSGVDLENETICGHVRKDGIW CEEEEEECCCCCCCCEEEEEEEEEEEHEECCCCEEEEECCCCCCCCCCCEECEEECCCEE IKEKTLFPEVIINVSPPSAKDRTEIEKSLRKKIPFTKNLIHDKLGFYVLMNKTGKYTKYL EEECCCCCEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCEEEEEECCCCEEEEE IPTKKVDSIKTIEEFINNYQTVIIKPSKGRQGKGVIYIEKKKDHYLLIKDQGKKHLHKKE CCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEEECCCCEEEEECCCCHHHHHHH FIKFANKLIAKKYLVQKYVYCRTEEGFPFDFRIVTQRDGKGNWVLATSYARIGKDRSLVT HHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEEEEECCCCCEEEEECHHHHCCCCCEEE ANISRGGMVANFKHTLIKELGLKKADKYEEYIQQLALNISKHVNKLYKHEIDELGVDIAV EECCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE DNNENIWLFEVNTGPSNSTIQWETTPNKLAYAKYLAYLNRINKLKKVDKIISNIVKGLVQ ECCCCEEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IEDDLENGNLEKAVNLTPSLLKGFSSIDRTIMSFTTEPNTNIYDSTNKIREGFSNLVYAY HHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHEEEEE ENSNLANAKETVDYQLVPNFQELSSKIQEILRENEHC ECCCCCCHHHCCEEEECCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLIGIYHGKKSPFDVQRYEILYTLTARAKMEGDEIIIFDNSGVDLENETICGHVRKDGIW CEEEEEECCCCCCCCEEEEEEEEEEEHEECCCCEEEEECCCCCCCCCCCEECEEECCCEE IKEKTLFPEVIINVSPPSAKDRTEIEKSLRKKIPFTKNLIHDKLGFYVLMNKTGKYTKYL EEECCCCCEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCEEEEEECCCCEEEEE IPTKKVDSIKTIEEFINNYQTVIIKPSKGRQGKGVIYIEKKKDHYLLIKDQGKKHLHKKE CCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEEECCCCEEEEECCCCHHHHHHH FIKFANKLIAKKYLVQKYVYCRTEEGFPFDFRIVTQRDGKGNWVLATSYARIGKDRSLVT HHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEEEEECCCCCEEEEECHHHHCCCCCEEE ANISRGGMVANFKHTLIKELGLKKADKYEEYIQQLALNISKHVNKLYKHEIDELGVDIAV EECCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE DNNENIWLFEVNTGPSNSTIQWETTPNKLAYAKYLAYLNRINKLKKVDKIISNIVKGLVQ ECCCCEEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IEDDLENGNLEKAVNLTPSLLKGFSSIDRTIMSFTTEPNTNIYDSTNKIREGFSNLVYAY HHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHEEEEE ENSNLANAKETVDYQLVPNFQELSSKIQEILRENEHC ECCCCCCHHHCCEEEECCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]