Definition Natranaerobius thermophilus JW/NM-WN-LF, complete genome.
Accession NC_010718
Length 3,165,557

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The map label for this gene is yheD [H]

Identifier: 188586835

GI number: 188586835

Start: 2364900

End: 2366273

Strand: Reverse

Name: yheD [H]

Synonym: Nther_2226

Alternate gene names: 188586835

Gene position: 2366273-2364900 (Counterclockwise)

Preceding gene: 188586836

Following gene: 188586834

Centisome position: 74.75

GC content: 28.75

Gene sequence:

>1374_bases
TTGTTAATAGGTATCTATCATGGTAAAAAATCTCCTTTTGATGTTCAAAGGTACGAAATATTATATACCTTAACTGCAAG
GGCTAAAATGGAAGGCGATGAAATCATAATTTTTGATAATAGTGGTGTGGATTTGGAAAATGAAACAATTTGCGGTCATG
TAAGGAAAGATGGTATCTGGATAAAAGAGAAAACTTTGTTTCCAGAAGTTATTATTAATGTCTCACCACCTTCTGCAAAA
GATCGTACTGAGATTGAGAAATCGTTAAGGAAAAAGATTCCTTTCACTAAAAATTTAATACATGATAAACTCGGCTTCTA
TGTATTAATGAATAAAACAGGAAAATACACTAAATACTTAATACCCACCAAAAAAGTAGACAGTATAAAAACAATTGAAG
AATTTATAAATAATTATCAAACAGTGATAATAAAACCCTCTAAAGGGAGACAGGGAAAAGGTGTCATATATATTGAAAAG
AAAAAAGACCATTACTTACTTATAAAGGACCAAGGAAAAAAACACTTACACAAAAAAGAATTCATAAAATTTGCGAATAA
ATTAATAGCTAAAAAATACTTAGTTCAGAAGTATGTATATTGTAGAACAGAAGAAGGGTTCCCTTTTGACTTTAGAATTG
TAACTCAACGAGATGGAAAAGGCAACTGGGTTTTGGCCACCTCTTATGCCAGAATAGGAAAGGATAGGAGTTTAGTGACA
GCTAATATCAGTAGAGGTGGAATGGTTGCCAACTTCAAACATACACTAATTAAAGAATTGGGATTAAAAAAAGCTGATAA
ATATGAAGAATATATACAACAATTAGCTTTAAATATATCAAAACATGTAAACAAATTATATAAACATGAAATAGATGAAC
TGGGAGTTGATATTGCTGTAGATAATAATGAAAATATATGGTTATTTGAAGTTAATACAGGACCTAGTAATTCAACAATT
CAATGGGAGACAACTCCGAATAAATTAGCTTATGCAAAGTATTTAGCATATCTGAATAGGATAAACAAATTAAAAAAAGT
CGATAAAATTATTAGTAATATAGTGAAAGGTCTAGTACAAATAGAAGATGATTTAGAAAATGGGAATTTAGAAAAAGCTG
TTAATTTAACTCCAAGTTTATTAAAAGGTTTTTCCAGTATAGACAGAACTATAATGTCCTTTACAACAGAACCTAATACA
AATATATATGATAGTACAAATAAAATTAGAGAAGGATTCTCTAATTTAGTATATGCTTATGAGAACAGTAATTTAGCGAA
TGCAAAAGAAACTGTTGATTATCAACTAGTACCAAATTTTCAAGAACTAAGCTCTAAAATACAAGAAATTTTGAGAGAAA
ATGAACATTGTTAA

Upstream 100 bases:

>100_bases
TTCGACAAAAAGAGCTAATCAGGGCTGACCTCCCATTATAAATTTTGGGGGGTTAAGTTTTTGGCATTTCTAAGCTGATT
AAATGTAGGAGGTAATAATT

Downstream 100 bases:

>100_bases
TCTTAAAGTAAGAGTTTTGGTTTTAATTTATATCCATGCGATTTTATAGAAGATACCGTTTATTATTTATTTAATTCAAA
TTAATTTAAAATTAAGAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 457; Mature: 457

Protein sequence:

>457_residues
MLIGIYHGKKSPFDVQRYEILYTLTARAKMEGDEIIIFDNSGVDLENETICGHVRKDGIWIKEKTLFPEVIINVSPPSAK
DRTEIEKSLRKKIPFTKNLIHDKLGFYVLMNKTGKYTKYLIPTKKVDSIKTIEEFINNYQTVIIKPSKGRQGKGVIYIEK
KKDHYLLIKDQGKKHLHKKEFIKFANKLIAKKYLVQKYVYCRTEEGFPFDFRIVTQRDGKGNWVLATSYARIGKDRSLVT
ANISRGGMVANFKHTLIKELGLKKADKYEEYIQQLALNISKHVNKLYKHEIDELGVDIAVDNNENIWLFEVNTGPSNSTI
QWETTPNKLAYAKYLAYLNRINKLKKVDKIISNIVKGLVQIEDDLENGNLEKAVNLTPSLLKGFSSIDRTIMSFTTEPNT
NIYDSTNKIREGFSNLVYAYENSNLANAKETVDYQLVPNFQELSSKIQEILRENEHC

Sequences:

>Translated_457_residues
MLIGIYHGKKSPFDVQRYEILYTLTARAKMEGDEIIIFDNSGVDLENETICGHVRKDGIWIKEKTLFPEVIINVSPPSAK
DRTEIEKSLRKKIPFTKNLIHDKLGFYVLMNKTGKYTKYLIPTKKVDSIKTIEEFINNYQTVIIKPSKGRQGKGVIYIEK
KKDHYLLIKDQGKKHLHKKEFIKFANKLIAKKYLVQKYVYCRTEEGFPFDFRIVTQRDGKGNWVLATSYARIGKDRSLVT
ANISRGGMVANFKHTLIKELGLKKADKYEEYIQQLALNISKHVNKLYKHEIDELGVDIAVDNNENIWLFEVNTGPSNSTI
QWETTPNKLAYAKYLAYLNRINKLKKVDKIISNIVKGLVQIEDDLENGNLEKAVNLTPSLLKGFSSIDRTIMSFTTEPNT
NIYDSTNKIREGFSNLVYAYENSNLANAKETVDYQLVPNFQELSSKIQEILRENEHC
>Mature_457_residues
MLIGIYHGKKSPFDVQRYEILYTLTARAKMEGDEIIIFDNSGVDLENETICGHVRKDGIWIKEKTLFPEVIINVSPPSAK
DRTEIEKSLRKKIPFTKNLIHDKLGFYVLMNKTGKYTKYLIPTKKVDSIKTIEEFINNYQTVIIKPSKGRQGKGVIYIEK
KKDHYLLIKDQGKKHLHKKEFIKFANKLIAKKYLVQKYVYCRTEEGFPFDFRIVTQRDGKGNWVLATSYARIGKDRSLVT
ANISRGGMVANFKHTLIKELGLKKADKYEEYIQQLALNISKHVNKLYKHEIDELGVDIAVDNNENIWLFEVNTGPSNSTI
QWETTPNKLAYAKYLAYLNRINKLKKVDKIISNIVKGLVQIEDDLENGNLEKAVNLTPSLLKGFSSIDRTIMSFTTEPNT
NIYDSTNKIREGFSNLVYAYENSNLANAKETVDYQLVPNFQELSSKIQEILRENEHC

Specific function: Involved in sporulation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Forespore outer membrane; Peripheral membrane protein. Spore wall, spore coat. Note=Forms two rings around the forespore that are offset from its midpoint, before it eventually redistributes to form a shell around the developing spore [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yheC/yheD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013816 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52695; Mature: 52695

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: PS50975 ATP_GRASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIGIYHGKKSPFDVQRYEILYTLTARAKMEGDEIIIFDNSGVDLENETICGHVRKDGIW
CEEEEEECCCCCCCCEEEEEEEEEEEHEECCCCEEEEECCCCCCCCCCCEECEEECCCEE
IKEKTLFPEVIINVSPPSAKDRTEIEKSLRKKIPFTKNLIHDKLGFYVLMNKTGKYTKYL
EEECCCCCEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCEEEEEECCCCEEEEE
IPTKKVDSIKTIEEFINNYQTVIIKPSKGRQGKGVIYIEKKKDHYLLIKDQGKKHLHKKE
CCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEEECCCCEEEEECCCCHHHHHHH
FIKFANKLIAKKYLVQKYVYCRTEEGFPFDFRIVTQRDGKGNWVLATSYARIGKDRSLVT
HHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEEEEECCCCCEEEEECHHHHCCCCCEEE
ANISRGGMVANFKHTLIKELGLKKADKYEEYIQQLALNISKHVNKLYKHEIDELGVDIAV
EECCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
DNNENIWLFEVNTGPSNSTIQWETTPNKLAYAKYLAYLNRINKLKKVDKIISNIVKGLVQ
ECCCCEEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEDDLENGNLEKAVNLTPSLLKGFSSIDRTIMSFTTEPNTNIYDSTNKIREGFSNLVYAY
HHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHEEEEE
ENSNLANAKETVDYQLVPNFQELSSKIQEILRENEHC
ECCCCCCHHHCCEEEECCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLIGIYHGKKSPFDVQRYEILYTLTARAKMEGDEIIIFDNSGVDLENETICGHVRKDGIW
CEEEEEECCCCCCCCEEEEEEEEEEEHEECCCCEEEEECCCCCCCCCCCEECEEECCCEE
IKEKTLFPEVIINVSPPSAKDRTEIEKSLRKKIPFTKNLIHDKLGFYVLMNKTGKYTKYL
EEECCCCCEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCEEEEEECCCCEEEEE
IPTKKVDSIKTIEEFINNYQTVIIKPSKGRQGKGVIYIEKKKDHYLLIKDQGKKHLHKKE
CCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEEECCCCEEEEECCCCHHHHHHH
FIKFANKLIAKKYLVQKYVYCRTEEGFPFDFRIVTQRDGKGNWVLATSYARIGKDRSLVT
HHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEEEEECCCCCEEEEECHHHHCCCCCEEE
ANISRGGMVANFKHTLIKELGLKKADKYEEYIQQLALNISKHVNKLYKHEIDELGVDIAV
EECCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
DNNENIWLFEVNTGPSNSTIQWETTPNKLAYAKYLAYLNRINKLKKVDKIISNIVKGLVQ
ECCCCEEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEDDLENGNLEKAVNLTPSLLKGFSSIDRTIMSFTTEPNTNIYDSTNKIREGFSNLVYAY
HHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHEEEEE
ENSNLANAKETVDYQLVPNFQELSSKIQEILRENEHC
ECCCCCCHHHCCEEEECCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]