Definition Natranaerobius thermophilus JW/NM-WN-LF, complete genome.
Accession NC_010718
Length 3,165,557

Click here to switch to the map view.

The map label for this gene is 188586817

Identifier: 188586817

GI number: 188586817

Start: 2344358

End: 2345284

Strand: Reverse

Name: 188586817

Synonym: Nther_2208

Alternate gene names: NA

Gene position: 2345284-2344358 (Counterclockwise)

Preceding gene: 188586818

Following gene: 188586816

Centisome position: 74.09

GC content: 42.61

Gene sequence:

>927_bases
GTGCTATATAAAAAGTTGGTAGTTATGTTTTTGGTTTTAGCACTCCTATTCGTTGGATTGCTTGGTTGTACTTTGCAGGA
ACAGATAGACCCATTCTCCTTTTTAAGATCTTCAACATCCACAGATAGAAATAATCAAACCAGCCAGGGTGGTCAGGAGT
TCATTATTTACTGTGCTGCTACTGTCAAAGCTCCTGTTACTGAGTTGTTGGAACAGTACCGAGAAAAGCAGAACCAGACT
AATGACCCGGACCAAATCAAAGTAGATCATACAGAGTTAACGGGCGATCAAGGTAATGAAATACAAATAATCTATGGTAA
TAGTGGAGAACTCCTGTCCCAGTTGCAGTCAAGTCCGGGTGGAGGAGTTTATATTCCAGGGGATCCTCAATTTTTGGATA
AACTAGCTCAAATGTCCGTAAATAGCCAGTATGATACCACGGATAAATACACCATGGCCGAGCATTATCCGGTTTTGGTA
ACTAATGATGAACTAGGAGATCAGTTAAAATCCCTAACTGACCTAAAACAGTTGGATCCTGAGGATGACAATGCCCCCAG
CTTTTTGCTGGTAAAACCAGATCTCAGTGCCCTGAGTGACAGTAGTGAACGCCTGATTGAAAATGCCGATCTAACTTCCC
ATGTAGAAGAGAATTTAAGGGGGCGGGTGGGAACTGCTAATCAAGTGCCCATGTATCTCAGTCTAGGCATTGGAGATATA
GGTATCACCTGGTCCAGTAATTATCTTCGCTTTCAAGATGAACTATCTTTAATAGAATATCCCAATGAACTGATCCGAAC
AGTACCCATAACGGGGATGGCTGTAGCTGAAGAGGGAGATGATCAGGCCCTGGAGCGAAAGCAGGCTTTTTTGGAGTTCT
TGGTATCTGATGAGGCGTCACAGGTTTTTGAAAGACATGGTTACTAA

Upstream 100 bases:

>100_bases
TTCCAAAATGTTACAGGAACCTTGGTGCAAGGTCACTACCACTATGGGAAACTAACCTGGGCCTCAAGTGATGCTGCAAG
TTGTGTAGGTGATGGCAAAA

Downstream 100 bases:

>100_bases
AGAATTCATTAGGAAAAAGAGATGAACAATAAAAATCTAGGTGAAAAAATGGAGTTGAAAAGCTTATAAAATAATTTAGG
AAAAAAATAGAGAGGAAATA

Product: ABC-type molybdate transport system periplasmic component-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MLYKKLVVMFLVLALLFVGLLGCTLQEQIDPFSFLRSSTSTDRNNQTSQGGQEFIIYCAATVKAPVTELLEQYREKQNQT
NDPDQIKVDHTELTGDQGNEIQIIYGNSGELLSQLQSSPGGGVYIPGDPQFLDKLAQMSVNSQYDTTDKYTMAEHYPVLV
TNDELGDQLKSLTDLKQLDPEDDNAPSFLLVKPDLSALSDSSERLIENADLTSHVEENLRGRVGTANQVPMYLSLGIGDI
GITWSSNYLRFQDELSLIEYPNELIRTVPITGMAVAEEGDDQALERKQAFLEFLVSDEASQVFERHGY

Sequences:

>Translated_308_residues
MLYKKLVVMFLVLALLFVGLLGCTLQEQIDPFSFLRSSTSTDRNNQTSQGGQEFIIYCAATVKAPVTELLEQYREKQNQT
NDPDQIKVDHTELTGDQGNEIQIIYGNSGELLSQLQSSPGGGVYIPGDPQFLDKLAQMSVNSQYDTTDKYTMAEHYPVLV
TNDELGDQLKSLTDLKQLDPEDDNAPSFLLVKPDLSALSDSSERLIENADLTSHVEENLRGRVGTANQVPMYLSLGIGDI
GITWSSNYLRFQDELSLIEYPNELIRTVPITGMAVAEEGDDQALERKQAFLEFLVSDEASQVFERHGY
>Mature_308_residues
MLYKKLVVMFLVLALLFVGLLGCTLQEQIDPFSFLRSSTSTDRNNQTSQGGQEFIIYCAATVKAPVTELLEQYREKQNQT
NDPDQIKVDHTELTGDQGNEIQIIYGNSGELLSQLQSSPGGGVYIPGDPQFLDKLAQMSVNSQYDTTDKYTMAEHYPVLV
TNDELGDQLKSLTDLKQLDPEDDNAPSFLLVKPDLSALSDSSERLIENADLTSHVEENLRGRVGTANQVPMYLSLGIGDI
GITWSSNYLRFQDELSLIEYPNELIRTVPITGMAVAEEGDDQALERKQAFLEFLVSDEASQVFERHGY

Specific function: Unknown

COG id: COG0725

COG function: function code P; ABC-type molybdate transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34346; Mature: 34346

Theoretical pI: Translated: 4.05; Mature: 4.05

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYKKLVVMFLVLALLFVGLLGCTLQEQIDPFSFLRSSTSTDRNNQTSQGGQEFIIYCAA
CHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHCCCCCCCCCCCCCCCCEEEEEEEH
TVKAPVTELLEQYREKQNQTNDPDQIKVDHTELTGDQGNEIQIIYGNSGELLSQLQSSPG
HHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCEEEEEECCCHHHHHHHHCCCC
GGVYIPGDPQFLDKLAQMSVNSQYDTTDKYTMAEHYPVLVTNDELGDQLKSLTDLKQLDP
CEEEECCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCEEEECHHHHHHHHHHHHHHHCCC
EDDNAPSFLLVKPDLSALSDSSERLIENADLTSHVEENLRGRVGTANQVPMYLSLGIGDI
CCCCCCEEEEECCCHHHHCCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCE
GITWSSNYLRFQDELSLIEYPNELIRTVPITGMAVAEEGDDQALERKQAFLEFLVSDEAS
EEEECCCEEEEHHHHHHHHCCHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHCCHHH
QVFERHGY
HHHHHCCC
>Mature Secondary Structure
MLYKKLVVMFLVLALLFVGLLGCTLQEQIDPFSFLRSSTSTDRNNQTSQGGQEFIIYCAA
CHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHCCCCCCCCCCCCCCCCEEEEEEEH
TVKAPVTELLEQYREKQNQTNDPDQIKVDHTELTGDQGNEIQIIYGNSGELLSQLQSSPG
HHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCEEEEEECCCHHHHHHHHCCCC
GGVYIPGDPQFLDKLAQMSVNSQYDTTDKYTMAEHYPVLVTNDELGDQLKSLTDLKQLDP
CEEEECCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCEEEECHHHHHHHHHHHHHHHCCC
EDDNAPSFLLVKPDLSALSDSSERLIENADLTSHVEENLRGRVGTANQVPMYLSLGIGDI
CCCCCCEEEEECCCHHHHCCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCE
GITWSSNYLRFQDELSLIEYPNELIRTVPITGMAVAEEGDDQALERKQAFLEFLVSDEAS
EEEECCCEEEEHHHHHHHHCCHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHCCHHH
QVFERHGY
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA