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The map label for this gene is 188586756

Identifier: 188586756

GI number: 188586756

Start: 2271690

End: 2272535

Strand: Reverse

Name: 188586756

Synonym: Nther_2147

Alternate gene names: NA

Gene position: 2272535-2271690 (Counterclockwise)

Preceding gene: 188586757

Following gene: 188586755

Centisome position: 71.79

GC content: 37.12

Gene sequence:

>846_bases
ATGATTGAGTTCATGGAAGATGACCGTGTTTTTTTAAACTACGGTCCTATTCAAATGATTTTGGATATCAGTCATAAAAA
CAGTAAAGCTAATGATATAGCTAGAGAAGTAGCTGAAGAAATTAAACAGGAGTTTCTAGCTTTACAGAATGATTACGAAA
TACTAAAAACCACTGATATCCAAGATTTAAAAAAGTTGAGTGATGACAAAAGTTTTTCCATTGTGGCAAAAAAAATGATA
ACTGCTGTCCGAAGTACTGGCCTCAAGGAAATGACACCTTTATCTGCAGTGGCCGGTTCTTTTTCCGAACTTGCTGTAGA
GCTAGCCATGGAAAAAGGAGCCCATAAGGCTATTGTCAATAACGGTGGAGATATTGCCCTAATGAGTAAATTTGACGAAG
TGGTTAATGTAGGACTTCCTTTGTCTGACTGTGATGATAATAAGATACTCATTCCTGTTAATGCTAATAAAGGCATCTTC
GGGATATGCACCAGTGGTCTTGGGGGGAGAAGTTTTACCAAAGGAATTGCTGATGCTGTGGTAGTGGTCAGTTCTTCTCC
CCCTACCGCTGATGTATGTGCAACATATATAGCTAATGAAACCAATGTTGAAGATGAAAATATTTCACGCTGTAAAGCAA
AAGAACTAGATTCAGGAACGGATATTCCCGAAGAACTAGTTACCATAGAAGTGGGAGAATTAGATAAGAAAAAAGTTTAC
AGAGCTCTACTGAATGGTCTAAACCAAGCAGAAAATTTAGTTGCTGACAAACTAATCCAAGGGGCAGTACTATCAGTAAA
AAATGAAATTACCATGTTTCCCGAAAATCTAGCTAAATTAACATAA

Upstream 100 bases:

>100_bases
GATGACTCGAGACACTTTCGAAAAACTCGGAGGTCACACACACCATATCAAAACAAAAAAGGAATTGCTAAAGGAGCTGG
ACGAAAGCGAGGCTTAAGTG

Downstream 100 bases:

>100_bases
AGGAGCATTCCTGTAATGAATTAAAATGAAGATTGATAAAAAAAGTACCTCCTGCTAATATACGAGGTGTCGCTACACCT
AGAAATGACGACCCTTAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MIEFMEDDRVFLNYGPIQMILDISHKNSKANDIAREVAEEIKQEFLALQNDYEILKTTDIQDLKKLSDDKSFSIVAKKMI
TAVRSTGLKEMTPLSAVAGSFSELAVELAMEKGAHKAIVNNGGDIALMSKFDEVVNVGLPLSDCDDNKILIPVNANKGIF
GICTSGLGGRSFTKGIADAVVVVSSSPPTADVCATYIANETNVEDENISRCKAKELDSGTDIPEELVTIEVGELDKKKVY
RALLNGLNQAENLVADKLIQGAVLSVKNEITMFPENLAKLT

Sequences:

>Translated_281_residues
MIEFMEDDRVFLNYGPIQMILDISHKNSKANDIAREVAEEIKQEFLALQNDYEILKTTDIQDLKKLSDDKSFSIVAKKMI
TAVRSTGLKEMTPLSAVAGSFSELAVELAMEKGAHKAIVNNGGDIALMSKFDEVVNVGLPLSDCDDNKILIPVNANKGIF
GICTSGLGGRSFTKGIADAVVVVSSSPPTADVCATYIANETNVEDENISRCKAKELDSGTDIPEELVTIEVGELDKKKVY
RALLNGLNQAENLVADKLIQGAVLSVKNEITMFPENLAKLT
>Mature_281_residues
MIEFMEDDRVFLNYGPIQMILDISHKNSKANDIAREVAEEIKQEFLALQNDYEILKTTDIQDLKKLSDDKSFSIVAKKMI
TAVRSTGLKEMTPLSAVAGSFSELAVELAMEKGAHKAIVNNGGDIALMSKFDEVVNVGLPLSDCDDNKILIPVNANKGIF
GICTSGLGGRSFTKGIADAVVVVSSSPPTADVCATYIANETNVEDENISRCKAKELDSGTDIPEELVTIEVGELDKKKVY
RALLNGLNQAENLVADKLIQGAVLSVKNEITMFPENLAKLT

Specific function: Unknown

COG id: COG2122

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0280 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023156
- InterPro:   IPR003374
- InterPro:   IPR007183 [H]

Pfam domain/function: PF02424 ApbE [H]

EC number: NA

Molecular weight: Translated: 30486; Mature: 30486

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEFMEDDRVFLNYGPIQMILDISHKNSKANDIAREVAEEIKQEFLALQNDYEILKTTDI
CCCCCCCCEEEEEECCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHEECCCH
QDLKKLSDDKSFSIVAKKMITAVRSTGLKEMTPLSAVAGSFSELAVELAMEKGAHKAIVN
HHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHCHHHHHHCCHHHHHHHHHHHCCCCEEEEC
NGGDIALMSKFDEVVNVGLPLSDCDDNKILIPVNANKGIFGICTSGLGGRSFTKGIADAV
CCCCEEHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCHHHHHHHCEE
VVVSSSPPTADVCATYIANETNVEDENISRCKAKELDSGTDIPEELVTIEVGELDKKKVY
EEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCHHHEEEECCCCCHHHHH
RALLNGLNQAENLVADKLIQGAVLSVKNEITMFPENLAKLT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHCC
>Mature Secondary Structure
MIEFMEDDRVFLNYGPIQMILDISHKNSKANDIAREVAEEIKQEFLALQNDYEILKTTDI
CCCCCCCCEEEEEECCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHEECCCH
QDLKKLSDDKSFSIVAKKMITAVRSTGLKEMTPLSAVAGSFSELAVELAMEKGAHKAIVN
HHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHCHHHHHHCCHHHHHHHHHHHCCCCEEEEC
NGGDIALMSKFDEVVNVGLPLSDCDDNKILIPVNANKGIFGICTSGLGGRSFTKGIADAV
CCCCEEHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCHHHHHHHCEE
VVVSSSPPTADVCATYIANETNVEDENISRCKAKELDSGTDIPEELVTIEVGELDKKKVY
EEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCHHHEEEECCCCCHHHHH
RALLNGLNQAENLVADKLIQGAVLSVKNEITMFPENLAKLT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA