| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is 188586709
Identifier: 188586709
GI number: 188586709
Start: 2215068
End: 2215655
Strand: Reverse
Name: 188586709
Synonym: Nther_2099
Alternate gene names: NA
Gene position: 2215655-2215068 (Counterclockwise)
Preceding gene: 188586710
Following gene: 188586708
Centisome position: 69.99
GC content: 37.59
Gene sequence:
>588_bases ATGACAATTAAGCCGGACCTGCGCCTTCCCGAATACAAAACAAGAGATCAAATAAACTGGTATCAACTTTTTTTAATAAT AATATTAGTAGGTTTTCTAGGCCTTTTAGGGATGGGCTTTGGCCTCATGCAGCAAGAACTTGCTAGCCTGGAAAATAGAT TGGAACAGCTTGAACAGCTTGAACAAAACTTGATGACAGAACTTGAGGATTACGATAATTTAGGCGAAATGAAAGAAGAA TATGAATTAAAAACCGAACGGATCGAAAAACTCGAAAGTGGTCATATCAGCTGGTCTCAACACTTTGAAGAATTATCCCA AAATATGCCCCAGGGGCTTTGGTTGGAAGAGTATACTGCTGCTGAACCAGAGGAGATAAGCATAAGTGGATATGCAAATA CAGTTTTTGATGTGATGGTATTTTTACAGGAATTAGAAACTAATACACATCATGAACAGCTTGAGTTAGACTCTTTAACT GAAGGAGAAGGAGCTTACTATTTTAATATAAATGGTGAGCTGGACGTAACTGTATTAGAATGGGAAGATGAATCACAGGA TAATCAAGAAGCTGATGATGATGGATAG
Upstream 100 bases:
>100_bases TAGTTAATCCTTTCAAGCACATTAAATCCAGGGGAGAACTTGTAACTGAAGGTATGATGGCTAGTATTGCTACTGGCTTG GCCTTACGGAGGTGGACGAA
Downstream 100 bases:
>100_bases GAGTTGTTATCATGGATGAAAAAAACAAAGGATTAATTAATAAACTGTCCTCTTTATCCAAAAGAGAAAGGCTCTTACTT ATGATAGCAGGTATCCTGGT
Product: Fimbrial assembly family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MTIKPDLRLPEYKTRDQINWYQLFLIIILVGFLGLLGMGFGLMQQELASLENRLEQLEQLEQNLMTELEDYDNLGEMKEE YELKTERIEKLESGHISWSQHFEELSQNMPQGLWLEEYTAAEPEEISISGYANTVFDVMVFLQELETNTHHEQLELDSLT EGEGAYYFNINGELDVTVLEWEDESQDNQEADDDG
Sequences:
>Translated_195_residues MTIKPDLRLPEYKTRDQINWYQLFLIIILVGFLGLLGMGFGLMQQELASLENRLEQLEQLEQNLMTELEDYDNLGEMKEE YELKTERIEKLESGHISWSQHFEELSQNMPQGLWLEEYTAAEPEEISISGYANTVFDVMVFLQELETNTHHEQLELDSLT EGEGAYYFNINGELDVTVLEWEDESQDNQEADDDG >Mature_194_residues TIKPDLRLPEYKTRDQINWYQLFLIIILVGFLGLLGMGFGLMQQELASLENRLEQLEQLEQNLMTELEDYDNLGEMKEEY ELKTERIEKLESGHISWSQHFEELSQNMPQGLWLEEYTAAEPEEISISGYANTVFDVMVFLQELETNTHHEQLELDSLTE GEGAYYFNINGELDVTVLEWEDESQDNQEADDDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22767; Mature: 22636
Theoretical pI: Translated: 3.67; Mature: 3.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIKPDLRLPEYKTRDQINWYQLFLIIILVGFLGLLGMGFGLMQQELASLENRLEQLEQL CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH EQNLMTELEDYDNLGEMKEEYELKTERIEKLESGHISWSQHFEELSQNMPQGLWLEEYTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHCC AEPEEISISGYANTVFDVMVFLQELETNTHHEQLELDSLTEGEGAYYFNINGELDVTVLE CCCCEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCEEEEEECCEEEEEEEE WEDESQDNQEADDDG CCCCCCCCCCCCCCC >Mature Secondary Structure TIKPDLRLPEYKTRDQINWYQLFLIIILVGFLGLLGMGFGLMQQELASLENRLEQLEQL CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH EQNLMTELEDYDNLGEMKEEYELKTERIEKLESGHISWSQHFEELSQNMPQGLWLEEYTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHCC AEPEEISISGYANTVFDVMVFLQELETNTHHEQLELDSLTEGEGAYYFNINGELDVTVLE CCCCEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCEEEEEECCEEEEEEEE WEDESQDNQEADDDG CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA