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The map label for this gene is ybjZ [C]

Identifier: 188586693

GI number: 188586693

Start: 2203189

End: 2205582

Strand: Reverse

Name: ybjZ [C]

Synonym: Nther_2083

Alternate gene names: 188586693

Gene position: 2205582-2203189 (Counterclockwise)

Preceding gene: 188586694

Following gene: 188586692

Centisome position: 69.67

GC content: 37.64

Gene sequence:

>2394_bases
ATGCTATGGTTAAAAATGCTTCGCGACATTTGGAGTAACAAAGGGTCGTATATAGCCTGCTTAGTTATTGTGCTTCTGGG
TTTGATTGTATTCACATCCTTTTCCATTGTGAGTGATAATCTAGTCTTGTCTAAAGACAATTTTTATAGTAATCAAAATT
TCGCCCACGGTTTTGCTGAATTTCAATCAATACCAAAATCCCGGGTCGATTCCCTGTCCCAAATTGAAGGAATTAGACAA
ATAGATGGTAGACTAGTTAAAGATGTCAGGGTGTATGATTCCCAACGGGATGAATCCGTTTATTTGCGTCTGGTATCTCT
GGATTTAGATAATCCCAATAGGTTAAATAATGTTAAAAAACTGGGAGGTAATCAACTACAAGCAGGACAATTACAGGCTT
GGATTGATAATCAGTTTTACGATGCCAATCAATTGCAATTGGGTGACACCTTAGAGGTTATAGCTGAAGGTAGGGTTCAG
GAACTAACTATACAGGGAAAAGGTATGAGTCCAGAATTCACTTATCCTCTCAGGACTGAAACAGAATTATTCCCCAATCC
AGAACAGTTTGGAATTGCCTTTTTACCTTATGAAGATATGTCCACATTGTTTCCTGATCAGGAAAACAGGGTTAATAATC
TAGTTTTTACTATAAATCCTAAATTTAAATTTTCAGAAGTAGAAAATTTATTGGAGCCAGAACTTGATCAATATGGCTTA
CAGACTATTTATTCAAGGGAAAATCAAACTAGTCATTTGATTTTGTCTGAAGAAGTGGCTATGTTAGAACGAGTTTCTCG
AGCTCTTCCCTTGACCTTTCTGAGTATAGCTGGAATTATACTTTTTATTATGTTAAAACGATTGATTGAACAACAGCGTG
GGCAAATAGGTATTTTGAAGGCCTTTGGTTATACCGACAGGGAAATAGTTATTCATTATCTATCTTATTCGATATTAATT
GGCGCAGTGGGCGGACTAGCCGGGAGCATCATTGGGATGTTTTTAGCAACTCCTTTAACCGAATTATTATTGGAGTTCTT
CAATGTTCCCAGGTTTTATGAGGGTTTTTCCATGTACTATCTCATTTTAGGCCTGGCTTTATCCCTTTCCGTATTCGTTG
TAGCAGGGTATTTAGGGTGCAGGCCGGCTATGGATTTAAAGCCTGCCGAAGCCATGAAACCCCCAGCGCCACCATCCGGG
AAAAAGGTCATATTAGAAAAAATTGATTTAATTTGGAAAATGTTTACAATTCAAGGAAAAATGGCAATTCGAAATATTTT
TAGAAACAGGGGTAGAAGTATTTTTCTCTTTGTTGGAATTACCCTGAGTTGTGCTGTTGTAGCTTTGACATGGTCATTAA
ATGAACTTATTGACCTTTTGATTTTTTATCAACACGAAGAGGTTGAAACTTATGATGCCCGGGTGAATTTGTCCAATCCC
GTAGAAATAGATGTGGGTCGACGTGAATTAGAAAGTAACTCTGTAGTTGAGCATGTAGAACCTCTGAATGAAATTCCCAT
TACTCTATCTCATCTAGGGAATTCGGAAGATATCGCCCTTTTGGGGATAACTGGAACTAGTGATATGTATACCATTTTAG
ATTCTGACGAAAATCAAATAGATCTGGAAAAGACCCAAGGAATCATTTTATCTGAAAGACTAGCCGAGAAATTAAATGTA
ACACAGGGGGATAGTCTGGAATTTGAGAGCCCCTATTTGAGAAATGGAGACAATTCAAGGCCAGTAGAAGTTGACAAAAC
AGTACCTCAATACTTAGGTATGAACGCCTATATGGAAGTAGGCAATCTAGCGGGACTGTTGGATCAGGGGAATATTACTA
CATCTTATATGGTGAACTTGAATGATAAGAATGGTGAAACACTTTTGGAAAATCTCTCTCTATTAAAAGAGCGTTATCGA
GAAAGTGATGTGGTTTCAGGTATAGATGGACGTCATGAAAGGATAGAACAGTCCGAAGAACTTATGGAAACCTTTGGTAG
TTTAATTTATATATACGTATTATTTGGTGTGATCCTTTGCTTTGCAATAATTTACAGTTCAAGTTTTATAATTTTATCGG
AACGAAGTCGAGAACTGGCTTCTATGCGTGTCTTAGGCATGACATCCAGGGAAGTTTTTACAGTGATCACTTTTGAACAG
TGGTTTATCAGTATATTTGCTATAATAACGGCTGTACCTTTGGCTCAGCTAATGCAGTGGGGCATGGCTCGAAATTTTAG
TACAGACTTTTATGTTCTACCTGGTGAAATGTCAACTACAGCTCTAATTGCAGGTGTGATCATTACGGTATTTTCTATAT
GGACAGCTCAGAGATTTGCCTTGAGGAAGGTGAGAAATCTGAGTTTAGTAGATGTGTTGAAATCCAGAGAGTGA

Upstream 100 bases:

>100_bases
TTAGTGAAATGGCAGATCGGGTGATACACCTGAAAGATGGAAATGTAGATTATGTAGAGGAAAACCAAAATCCTGTGGCA
GCAGAGCAGGTGAGCTGGTA

Downstream 100 bases:

>100_bases
TACAGTCTTACTGTTTGAGAGGGGGAGAGGAGTAATGAAAAAGAAGTGGAAAATTCTTTTTGGAGTTTTGATATTGGTAG
CTGCTGCCAGCTTTATTACA

Product: hypothetical protein

Products: NA

Alternate protein names: Permease; Peptide ABC Transporter Permease; ABC Transporter Permease; Efflux ABC Transporter Permease Protein; ABC Transporter; Permease Domain Protein; ABC Transporter Inner Membrane Subunit; Antimicrobial Peptide ABC Transporter Permease; Permease Domain-Containing Protein; Efflux ABC Transporter Permease; ABC-Type Antimicrobial Peptide Transport System Protein; Large Transmembrane Protein Possibly Involved In Transport; ABC-Type Transporter; ABC-Type Transport System Permease; ABC-Type Transport System

Number of amino acids: Translated: 797; Mature: 797

Protein sequence:

>797_residues
MLWLKMLRDIWSNKGSYIACLVIVLLGLIVFTSFSIVSDNLVLSKDNFYSNQNFAHGFAEFQSIPKSRVDSLSQIEGIRQ
IDGRLVKDVRVYDSQRDESVYLRLVSLDLDNPNRLNNVKKLGGNQLQAGQLQAWIDNQFYDANQLQLGDTLEVIAEGRVQ
ELTIQGKGMSPEFTYPLRTETELFPNPEQFGIAFLPYEDMSTLFPDQENRVNNLVFTINPKFKFSEVENLLEPELDQYGL
QTIYSRENQTSHLILSEEVAMLERVSRALPLTFLSIAGIILFIMLKRLIEQQRGQIGILKAFGYTDREIVIHYLSYSILI
GAVGGLAGSIIGMFLATPLTELLLEFFNVPRFYEGFSMYYLILGLALSLSVFVVAGYLGCRPAMDLKPAEAMKPPAPPSG
KKVILEKIDLIWKMFTIQGKMAIRNIFRNRGRSIFLFVGITLSCAVVALTWSLNELIDLLIFYQHEEVETYDARVNLSNP
VEIDVGRRELESNSVVEHVEPLNEIPITLSHLGNSEDIALLGITGTSDMYTILDSDENQIDLEKTQGIILSERLAEKLNV
TQGDSLEFESPYLRNGDNSRPVEVDKTVPQYLGMNAYMEVGNLAGLLDQGNITTSYMVNLNDKNGETLLENLSLLKERYR
ESDVVSGIDGRHERIEQSEELMETFGSLIYIYVLFGVILCFAIIYSSSFIILSERSRELASMRVLGMTSREVFTVITFEQ
WFISIFAIITAVPLAQLMQWGMARNFSTDFYVLPGEMSTTALIAGVIITVFSIWTAQRFALRKVRNLSLVDVLKSRE

Sequences:

>Translated_797_residues
MLWLKMLRDIWSNKGSYIACLVIVLLGLIVFTSFSIVSDNLVLSKDNFYSNQNFAHGFAEFQSIPKSRVDSLSQIEGIRQ
IDGRLVKDVRVYDSQRDESVYLRLVSLDLDNPNRLNNVKKLGGNQLQAGQLQAWIDNQFYDANQLQLGDTLEVIAEGRVQ
ELTIQGKGMSPEFTYPLRTETELFPNPEQFGIAFLPYEDMSTLFPDQENRVNNLVFTINPKFKFSEVENLLEPELDQYGL
QTIYSRENQTSHLILSEEVAMLERVSRALPLTFLSIAGIILFIMLKRLIEQQRGQIGILKAFGYTDREIVIHYLSYSILI
GAVGGLAGSIIGMFLATPLTELLLEFFNVPRFYEGFSMYYLILGLALSLSVFVVAGYLGCRPAMDLKPAEAMKPPAPPSG
KKVILEKIDLIWKMFTIQGKMAIRNIFRNRGRSIFLFVGITLSCAVVALTWSLNELIDLLIFYQHEEVETYDARVNLSNP
VEIDVGRRELESNSVVEHVEPLNEIPITLSHLGNSEDIALLGITGTSDMYTILDSDENQIDLEKTQGIILSERLAEKLNV
TQGDSLEFESPYLRNGDNSRPVEVDKTVPQYLGMNAYMEVGNLAGLLDQGNITTSYMVNLNDKNGETLLENLSLLKERYR
ESDVVSGIDGRHERIEQSEELMETFGSLIYIYVLFGVILCFAIIYSSSFIILSERSRELASMRVLGMTSREVFTVITFEQ
WFISIFAIITAVPLAQLMQWGMARNFSTDFYVLPGEMSTTALIAGVIITVFSIWTAQRFALRKVRNLSLVDVLKSRE
>Mature_797_residues
MLWLKMLRDIWSNKGSYIACLVIVLLGLIVFTSFSIVSDNLVLSKDNFYSNQNFAHGFAEFQSIPKSRVDSLSQIEGIRQ
IDGRLVKDVRVYDSQRDESVYLRLVSLDLDNPNRLNNVKKLGGNQLQAGQLQAWIDNQFYDANQLQLGDTLEVIAEGRVQ
ELTIQGKGMSPEFTYPLRTETELFPNPEQFGIAFLPYEDMSTLFPDQENRVNNLVFTINPKFKFSEVENLLEPELDQYGL
QTIYSRENQTSHLILSEEVAMLERVSRALPLTFLSIAGIILFIMLKRLIEQQRGQIGILKAFGYTDREIVIHYLSYSILI
GAVGGLAGSIIGMFLATPLTELLLEFFNVPRFYEGFSMYYLILGLALSLSVFVVAGYLGCRPAMDLKPAEAMKPPAPPSG
KKVILEKIDLIWKMFTIQGKMAIRNIFRNRGRSIFLFVGITLSCAVVALTWSLNELIDLLIFYQHEEVETYDARVNLSNP
VEIDVGRRELESNSVVEHVEPLNEIPITLSHLGNSEDIALLGITGTSDMYTILDSDENQIDLEKTQGIILSERLAEKLNV
TQGDSLEFESPYLRNGDNSRPVEVDKTVPQYLGMNAYMEVGNLAGLLDQGNITTSYMVNLNDKNGETLLENLSLLKERYR
ESDVVSGIDGRHERIEQSEELMETFGSLIYIYVLFGVILCFAIIYSSSFIILSERSRELASMRVLGMTSREVFTVITFEQ
WFISIFAIITAVPLAQLMQWGMARNFSTDFYVLPGEMSTTALIAGVIITVFSIWTAQRFALRKVRNLSLVDVLKSRE

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 90137; Mature: 90137

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLWLKMLRDIWSNKGSYIACLVIVLLGLIVFTSFSIVSDNLVLSKDNFYSNQNFAHGFAE
CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHH
FQSIPKSRVDSLSQIEGIRQIDGRLVKDVRVYDSQRDESVYLRLVSLDLDNPNRLNNVKK
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCHHHHHHHH
LGGNQLQAGQLQAWIDNQFYDANQLQLGDTLEVIAEGRVQELTIQGKGMSPEFTYPLRTE
CCCCCCCCCHHHHHHCCCCCCCCCEECCCHHHHHHCCCEEEEEEECCCCCCCCCCCCCCC
TELFPNPEQFGIAFLPYEDMSTLFPDQENRVNNLVFTINPKFKFSEVENLLEPELDQYGL
CCCCCCHHHCCEEEECCHHHHHHCCCCCCCCCCEEEEECCCEEHHHHHHHHCCCHHHHHH
QTIYSRENQTSHLILSEEVAMLERVSRALPLTFLSIAGIILFIMLKRLIEQQRGQIGILK
HHHHCCCCCCCEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
AFGYTDREIVIHYLSYSILIGAVGGLAGSIIGMFLATPLTELLLEFFNVPRFYEGFSMYY
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
LILGLALSLSVFVVAGYLGCRPAMDLKPAEAMKPPAPPSGKKVILEKIDLIWKMFTIQGK
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
MAIRNIFRNRGRSIFLFVGITLSCAVVALTWSLNELIDLLIFYQHEEVETYDARVNLSNP
HHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCC
VEIDVGRRELESNSVVEHVEPLNEIPITLSHLGNSEDIALLGITGTSDMYTILDSDENQI
CEECCCHHHHCCCHHHHHHCCHHHCCEEHHHCCCCCCEEEEEEECCCCEEEEECCCCCCE
DLEKTQGIILSERLAEKLNVTQGDSLEFESPYLRNGDNSRPVEVDKTVPQYLGMNAYMEV
EHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHCCHHHHHH
GNLAGLLDQGNITTSYMVNLNDKNGETLLENLSLLKERYRESDVVSGIDGRHERIEQSEE
HHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LMETFGSLIYIYVLFGVILCFAIIYSSSFIILSERSRELASMRVLGMTSREVFTVITFEQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCCEEEEEEHHH
WFISIFAIITAVPLAQLMQWGMARNFSTDFYVLPGEMSTTALIAGVIITVFSIWTAQRFA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
LRKVRNLSLVDVLKSRE
HHHHHCCHHHHHHHCCC
>Mature Secondary Structure
MLWLKMLRDIWSNKGSYIACLVIVLLGLIVFTSFSIVSDNLVLSKDNFYSNQNFAHGFAE
CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHH
FQSIPKSRVDSLSQIEGIRQIDGRLVKDVRVYDSQRDESVYLRLVSLDLDNPNRLNNVKK
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCHHHHHHHH
LGGNQLQAGQLQAWIDNQFYDANQLQLGDTLEVIAEGRVQELTIQGKGMSPEFTYPLRTE
CCCCCCCCCHHHHHHCCCCCCCCCEECCCHHHHHHCCCEEEEEEECCCCCCCCCCCCCCC
TELFPNPEQFGIAFLPYEDMSTLFPDQENRVNNLVFTINPKFKFSEVENLLEPELDQYGL
CCCCCCHHHCCEEEECCHHHHHHCCCCCCCCCCEEEEECCCEEHHHHHHHHCCCHHHHHH
QTIYSRENQTSHLILSEEVAMLERVSRALPLTFLSIAGIILFIMLKRLIEQQRGQIGILK
HHHHCCCCCCCEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
AFGYTDREIVIHYLSYSILIGAVGGLAGSIIGMFLATPLTELLLEFFNVPRFYEGFSMYY
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
LILGLALSLSVFVVAGYLGCRPAMDLKPAEAMKPPAPPSGKKVILEKIDLIWKMFTIQGK
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
MAIRNIFRNRGRSIFLFVGITLSCAVVALTWSLNELIDLLIFYQHEEVETYDARVNLSNP
HHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCC
VEIDVGRRELESNSVVEHVEPLNEIPITLSHLGNSEDIALLGITGTSDMYTILDSDENQI
CEECCCHHHHCCCHHHHHHCCHHHCCEEHHHCCCCCCEEEEEEECCCCEEEEECCCCCCE
DLEKTQGIILSERLAEKLNVTQGDSLEFESPYLRNGDNSRPVEVDKTVPQYLGMNAYMEV
EHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHCCHHHHHH
GNLAGLLDQGNITTSYMVNLNDKNGETLLENLSLLKERYRESDVVSGIDGRHERIEQSEE
HHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LMETFGSLIYIYVLFGVILCFAIIYSSSFIILSERSRELASMRVLGMTSREVFTVITFEQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCCEEEEEEHHH
WFISIFAIITAVPLAQLMQWGMARNFSTDFYVLPGEMSTTALIAGVIITVFSIWTAQRFA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
LRKVRNLSLVDVLKSRE
HHHHHCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA