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The map label for this gene is yddH [C]

Identifier: 188586650

GI number: 188586650

Start: 2156117

End: 2156677

Strand: Reverse

Name: yddH [C]

Synonym: Nther_2040

Alternate gene names: 188586650

Gene position: 2156677-2156117 (Counterclockwise)

Preceding gene: 188586652

Following gene: 188586649

Centisome position: 68.13

GC content: 37.25

Gene sequence:

>561_bases
TTGCAAAAGAAAGTTTTTGACCCAGGTACCTATTTGTTCCCAGTTCCAGCTGTTATGGTGAGTTGTGCGGGAGGTGGTCA
ACAAAATATTATCACTATAGCTTGGACAGGAACTGTCAATTCCAAACCACCAATGGTAGGTATTTCAATTACACCCCAGC
GATATTCCTTTGATCTAATTAAAGAAACCGGTGAATTTGTAGTAAACATCCCCGATGATAGTTTAGTGAAGGAAACTGAT
TATTGTGGTTGTGTTTCAGGCCGTAAGGTGGATAAATTCAAAGATACTGGTTTAACGTCAATTCCCGCAAAAACTATCTC
AGTGCCCATGATAGGAGAAGCTCCTGTAAATTTGGAGTGTAAAGTAGTTGCAGAAAATGAATTAGGTAGTCATCACCAAT
TTATTGGTGAAGTTAAAAAAGTCCATATAGCCAATAATTTGATTGACGAACAAGGAAAACTGGATATTTACAAAGGTAAT
TTAATCAGCTTTGGAGGGAAAGCTTACTATCAACCGGGAAAACAAATTTACGGTCGTGGTGAATCAATGAAACAAAAATA
A

Upstream 100 bases:

>100_bases
AATATAATTTTATTGGTTTATTGTAAAAGTTAGCATGAATCAAACATATTATTTATACTAAAATAAGGAAGTTTTTAAAA
CTGGAGAGGAGGTTTTAATA

Downstream 100 bases:

>100_bases
AAATATTATTTCTAACAGCTTTTGTTTTAGCAGATTCACAGAAGTGAATACAAATAATCATTATAACTAGCGCCTGGGTA
AGTGGCGCTAGTATTTTTTT

Product: flavin reductase domain protein FMN-binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MQKKVFDPGTYLFPVPAVMVSCAGGGQQNIITIAWTGTVNSKPPMVGISITPQRYSFDLIKETGEFVVNIPDDSLVKETD
YCGCVSGRKVDKFKDTGLTSIPAKTISVPMIGEAPVNLECKVVAENELGSHHQFIGEVKKVHIANNLIDEQGKLDIYKGN
LISFGGKAYYQPGKQIYGRGESMKQK

Sequences:

>Translated_186_residues
MQKKVFDPGTYLFPVPAVMVSCAGGGQQNIITIAWTGTVNSKPPMVGISITPQRYSFDLIKETGEFVVNIPDDSLVKETD
YCGCVSGRKVDKFKDTGLTSIPAKTISVPMIGEAPVNLECKVVAENELGSHHQFIGEVKKVHIANNLIDEQGKLDIYKGN
LISFGGKAYYQPGKQIYGRGESMKQK
>Mature_186_residues
MQKKVFDPGTYLFPVPAVMVSCAGGGQQNIITIAWTGTVNSKPPMVGISITPQRYSFDLIKETGEFVVNIPDDSLVKETD
YCGCVSGRKVDKFKDTGLTSIPAKTISVPMIGEAPVNLECKVVAENELGSHHQFIGEVKKVHIANNLIDEQGKLDIYKGN
LISFGGKAYYQPGKQIYGRGESMKQK

Specific function: Unknown

COG id: COG1853

COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flavoredoxin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002563
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01613 Flavin_Reduct [H]

EC number: NA

Molecular weight: Translated: 20287; Mature: 20287

Theoretical pI: Translated: 8.30; Mature: 8.30

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKKVFDPGTYLFPVPAVMVSCAGGGQQNIITIAWTGTVNSKPPMVGISITPQRYSFDLI
CCCCCCCCCCEEEECHHEEEECCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCHHEE
KETGEFVVNIPDDSLVKETDYCGCVSGRKVDKFKDTGLTSIPAKTISVPMIGEAPVNLEC
ECCCCEEEECCCCHHCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCEEECEECCCCCCEEE
KVVAENELGSHHQFIGEVKKVHIANNLIDEQGKLDIYKGNLISFGGKAYYQPGKQIYGRG
EEEECCCCCCHHHHHHHHHEEHHHHHHHCCCCCEEEEECCEEEECCEEEECCCHHHHCCC
ESMKQK
CCCCCC
>Mature Secondary Structure
MQKKVFDPGTYLFPVPAVMVSCAGGGQQNIITIAWTGTVNSKPPMVGISITPQRYSFDLI
CCCCCCCCCCEEEECHHEEEECCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCHHEE
KETGEFVVNIPDDSLVKETDYCGCVSGRKVDKFKDTGLTSIPAKTISVPMIGEAPVNLEC
ECCCCEEEECCCCHHCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCEEECEECCCCCCEEE
KVVAENELGSHHQFIGEVKKVHIANNLIDEQGKLDIYKGNLISFGGKAYYQPGKQIYGRG
EEEECCCCCCHHHHHHHHHEEHHHHHHHCCCCCEEEEECCEEEECCEEEECCCHHHHCCC
ESMKQK
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]