| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is 188586599
Identifier: 188586599
GI number: 188586599
Start: 2095646
End: 2096704
Strand: Reverse
Name: 188586599
Synonym: Nther_1989
Alternate gene names: NA
Gene position: 2096704-2095646 (Counterclockwise)
Preceding gene: 188586600
Following gene: 188586598
Centisome position: 66.23
GC content: 31.16
Gene sequence:
>1059_bases ATGTCCCATAATGAACTTACAGATAAACGAAAACTTGAATTGGTTTTCCAAAATTTTAAAGAGTCTAAAAATATTGATGT CGAAAAACAAGAAAGAAAAGCAAAAGTAGATTTTATTAATAATAATTTAATGAAAGATCAATTAAGCAATTTTAATGAAG GAACTGTAAGGGAGCTAGTACAACTTTTATGGAGCTTTCAGGGTTGGACTAATAAGGACTATTTAGTTGAAGAAATGCTT AAGTCTGGGCTTGGAAATATTCGTGACGCATTGGAATTTCTTATCTATAGTGAAAAGCCTATAGCACATCGATTTGATTA TGTTAAGAGAAATATTCGAATGATGGGAGCAGCTGCTATTTCAGAAGTATTAACACATTTTGATGAGGATTGTGCAATTT GGAATAGAAGAGCCCGGGAAGGATTGATCAATTTAGGGGTTCCTAAAAATAAGCTTCCTAGTTCAACACAAATTAGTGGT AAACAATACGAAGACTTTTGTTTTTTAGCAAAAAAGGTATTAGATGAAATCAAAAGCTTTGATCAGGAAATTCAGAATTT TCTAGATTTAAATTCTTTATTATTTTTTCTTTCTAATTTAGATACATCTATTGTGGAGCAAAATGATGAAGAAGAGTTTA TTGAAGACTTTAATCATGATTATGCAATACAGCAAGTTGCTCAGTTAGGTGATGGACTAGGATTTGAAGTAGAAACAGAG TTTTATGTTGCTCCAGGCTGTAGAATTGATGCCTTATGGAGAAGCCGTATTGCAAACCTTGGAATTATATCTTATGCATT TGAAGTACATAGAAGAGGAAGTAGAGATTCTGCCATTTTGAATTTACAGAGAGTAATTAAACAAGACTCTTCAATTCAAA AAGTTATCGTAGTATCAACAAAAAAAGAAATTGAAATCTTTAAAAATGAAATAGCCTCATTAGGAGAAGAGTTTAGAGAT GCAATTGGTTATTTGGAAGTCGATGAATTAGAAAAAGCTCTTGAACACTTAGATAGTTTAAAAGAAGTCCTTAACTATGC AGGGTTATTAAAGACTTAA
Upstream 100 bases:
>100_bases AATCCACGAAAATTATTAATAAAGAAGATTACCATAAGATCATTGAGCAAGGGAATAATCAAAACTAAAGCAGTTTTTAA GCCTTCTAAGGAGGATAATT
Downstream 100 bases:
>100_bases ATTGTTAAACTTCTAGTTACCAATAAGGGCAATTTCGGTGAGTAAGTTTTTTATGCCAATTGATAAACCTGAAGATTGGA AAATGCTACTAGCCAAACCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 352; Mature: 351
Protein sequence:
>352_residues MSHNELTDKRKLELVFQNFKESKNIDVEKQERKAKVDFINNNLMKDQLSNFNEGTVRELVQLLWSFQGWTNKDYLVEEML KSGLGNIRDALEFLIYSEKPIAHRFDYVKRNIRMMGAAAISEVLTHFDEDCAIWNRRAREGLINLGVPKNKLPSSTQISG KQYEDFCFLAKKVLDEIKSFDQEIQNFLDLNSLLFFLSNLDTSIVEQNDEEEFIEDFNHDYAIQQVAQLGDGLGFEVETE FYVAPGCRIDALWRSRIANLGIISYAFEVHRRGSRDSAILNLQRVIKQDSSIQKVIVVSTKKEIEIFKNEIASLGEEFRD AIGYLEVDELEKALEHLDSLKEVLNYAGLLKT
Sequences:
>Translated_352_residues MSHNELTDKRKLELVFQNFKESKNIDVEKQERKAKVDFINNNLMKDQLSNFNEGTVRELVQLLWSFQGWTNKDYLVEEML KSGLGNIRDALEFLIYSEKPIAHRFDYVKRNIRMMGAAAISEVLTHFDEDCAIWNRRAREGLINLGVPKNKLPSSTQISG KQYEDFCFLAKKVLDEIKSFDQEIQNFLDLNSLLFFLSNLDTSIVEQNDEEEFIEDFNHDYAIQQVAQLGDGLGFEVETE FYVAPGCRIDALWRSRIANLGIISYAFEVHRRGSRDSAILNLQRVIKQDSSIQKVIVVSTKKEIEIFKNEIASLGEEFRD AIGYLEVDELEKALEHLDSLKEVLNYAGLLKT >Mature_351_residues SHNELTDKRKLELVFQNFKESKNIDVEKQERKAKVDFINNNLMKDQLSNFNEGTVRELVQLLWSFQGWTNKDYLVEEMLK SGLGNIRDALEFLIYSEKPIAHRFDYVKRNIRMMGAAAISEVLTHFDEDCAIWNRRAREGLINLGVPKNKLPSSTQISGK QYEDFCFLAKKVLDEIKSFDQEIQNFLDLNSLLFFLSNLDTSIVEQNDEEEFIEDFNHDYAIQQVAQLGDGLGFEVETEF YVAPGCRIDALWRSRIANLGIISYAFEVHRRGSRDSAILNLQRVIKQDSSIQKVIVVSTKKEIEIFKNEIASLGEEFRDA IGYLEVDELEKALEHLDSLKEVLNYAGLLKT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40696; Mature: 40564
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHNELTDKRKLELVFQNFKESKNIDVEKQERKAKVDFINNNLMKDQLSNFNEGTVRELV CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHH QLLWSFQGWTNKDYLVEEMLKSGLGNIRDALEFLIYSEKPIAHRFDYVKRNIRMMGAAAI HHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH SEVLTHFDEDCAIWNRRAREGLINLGVPKNKLPSSTQISGKQYEDFCFLAKKVLDEIKSF HHHHHHCCHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH DQEIQNFLDLNSLLFFLSNLDTSIVEQNDEEEFIEDFNHDYAIQQVAQLGDGLGFEVETE HHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEE FYVAPGCRIDALWRSRIANLGIISYAFEVHRRGSRDSAILNLQRVIKQDSSIQKVIVVST EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEEC KKEIEIFKNEIASLGEEFRDAIGYLEVDELEKALEHLDSLKEVLNYAGLLKT HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SHNELTDKRKLELVFQNFKESKNIDVEKQERKAKVDFINNNLMKDQLSNFNEGTVRELV CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHH QLLWSFQGWTNKDYLVEEMLKSGLGNIRDALEFLIYSEKPIAHRFDYVKRNIRMMGAAAI HHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH SEVLTHFDEDCAIWNRRAREGLINLGVPKNKLPSSTQISGKQYEDFCFLAKKVLDEIKSF HHHHHHCCHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH DQEIQNFLDLNSLLFFLSNLDTSIVEQNDEEEFIEDFNHDYAIQQVAQLGDGLGFEVETE HHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEE FYVAPGCRIDALWRSRIANLGIISYAFEVHRRGSRDSAILNLQRVIKQDSSIQKVIVVST EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEEC KKEIEIFKNEIASLGEEFRDAIGYLEVDELEKALEHLDSLKEVLNYAGLLKT HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA