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The map label for this gene is 188586595

Identifier: 188586595

GI number: 188586595

Start: 2088604

End: 2091264

Strand: Reverse

Name: 188586595

Synonym: Nther_1983

Alternate gene names: NA

Gene position: 2091264-2088604 (Counterclockwise)

Preceding gene: 188586598

Following gene: 188586594

Centisome position: 66.06

GC content: 33.48

Gene sequence:

>2661_bases
GTGTCAAAAAATTTTGATTTTGATTATTGGTGTTTAAAGAACAAAATTCCAGAACAAACAAAAAAATATATTGAAAACAT
AAGAGAAAGTCCTCCATCTAGAAATGTTCAAAGTGGCCCCAAAAATGTAAGGGGTAATTACCCATCAAAGAAAATGGGGT
GTACTATACAATTCGAGAGCCATACGGTTGAACTGGCAGCTATTTATTTAAAGGAGTATAACAACGAAATAAAAGAATTC
TATGATCAACCTCCATCAATACCTATTAAATACAAAAAAAATGGACAATCAAAAGGGATGCGCTATACTCCAGATTTTTT
TGTAATTGAAGATGATAAGGCTGGATGGGAAGAATGGAAAACTGAAGAAGATTTGATTAGATTAGAAGAGAAAAACCCAA
ATAGATATTATAAAGACACTAACGGTCAATGGCGGTGTCCGCCTGGAGAAGAGTATGCAAAAAAATATGGCTTGTTCTTT
AGAGTTAGATCTTCTTCAGAAATAGATGAAAACTTATATAATAATACGATTTTCTTAGAAGATTACTTAAGATATAATAT
CGAAGTAGATGATATAACTGTTAATACAATCATATCGACAGTTACTTTGGAGCCTGGAATTAAACTGGATAAGTTAATAA
AAAGTTTAGGAGAGGAATATGTTGATTCGATATACCACCTAATAGTAAGTAATGAATTATTTGTAGACTTAAAAAATGAA
ATGTTAGGAAGTAGAATGTTTCCTCCACCTATTTATCCCGATGAATTAACAGCAAAAGCATTTAATTATTCGATATCAAA
AACTCAGGAACAAAGACCAGAAATTATTGATATTAAAATTGGAAACAAAATAAATTGGGATGGGCGCTCATTTACTATAG
CTAACATTGGAGAAACTACCATAACTTTAATATCTCAAGACGACAACCAGCAGATAGACCTCCCACACAACAGTTTTGAA
GAATTGTTACAAAATGGGAAGGTTAAGTTAGATAAGATTGGTGAAAACACAAATAAAGATAATGAAAAAATTAATGAAAT
TTTATCAAAGGCCAGCCCTGAGGCAATGGAAATAGCAACTAAAAGATATGAAGAAATAGTACCTATTTTAAATGGCAAAA
ACCCTAATACGGATACTCCTCCAAGAACATTGCGAAATTGGGTCTCAAACTACAGAGAAGCTGAAAAAGTCTTTGGAAAT
GGATATGTTGGGTTATTGCCCAGACATAAAGACAAGGGAAATAAAATGCCCCAAATCCACCAGAGGACTAGAGAACTTAT
GGAAGAAATAATAGAAACTGACTACGAAAACACTAAACAAAAAAATAAGAATTCTGTTTATCAGAAATTTAGAATTGAAT
GTGAGAAGCAAGGATTGGAACCATCCAGTTACAAAACTTTCATAAATGAAATAAATAAACGCCCCAACTATGAGAAAGTC
AAAAAGAGAGAAGGTTCGAAAGCTAGTTATCCGTATGAACCACCGCTAAGATTAGACCAGAATACCCCAAAACATGGAAA
CAGACCATTTGAGATATGCCATATTGATCATACTCAAATGGATATTGAGTTGGTAAATTCAATTACACGAGAAAACATGG
GTAAACCATGGGTGACATTCATGACTGATGCATTTTCTAGGAGGTTATTAGGAATTTATTTAACCTTTGATGAACCGTCA
TATAGGTCTATAATGATGGTCGTTCGTGAGTGCGTCAGAAGATTTAATAGACTACCTCAAAACTTTGTTATTGATGGTGG
AAAAGAGTTTCATAGTATATATTTTGATAGTTTCCTGGCGCGCTATGAATGTATTAAAAAAACCAGACCACCTTCAAAAT
CTCGTTTTGGAAATGTAATTGAGCGTTTGTTTGGAACAACTCATTCTCAACTTATATATAATCTCCAGGGGAATACCCAA
GCTACTAAAAAAGTTAGACAAATAACTAAAGGAACAAATCCGAAAAATAAAGCTATATGGACATTAGAGGAACTTTATAC
AGTTCTTTGTGAATGGGGGTATGAGTTATATGATACAACACCCCATCCTGCTTTGAGTCAAACACCAAGAGACGCTTTCA
ATGATGGGATGGTATATTCAGGAAAAAGGTATTCCCGATTAATCAGGTATGATGACCAGTTTAAGATTGATACTCTTCCC
TCTACACAAAAAGGTACGGCAAAAGTACAACCGGGGAGGGGTGTGAAAATTGATAAACGGTATTTTTGGCACGACCAATT
TAAAAACCCTGAAATAGAATATACACAAGTTCCGGTTAGATATGACCCCTTCAATATGGGTATTGCGTATGTTTTTGTAA
ATAAACATTGGGTTAAATGTATTTCCGAATACTATTCTGTATTCAAAAATCGCACTGAAAAGGAATTAAAAAGGGCAAGT
GAAGAATTAAGACAAAAACAAAGTCCTTCAAAATCTGCAATATCAGCAAAAAAACTAGCTAACTTCCTGATTCAAATTGA
GGAAAAGGAGAGTAAACTTTTAAAGCAGAAAAAAGAACGTGCAATGGAAAACCAAAATGTTATTGACAAAATTACTGGCA
ATCCAAATGTGGATGAAGTGAATGTTACACATGAACCCCCTGTGTTTAATGATGATTTGATAGATCCTAACGAAAATTCA
GATACTTATGAGGAGTTTTAG

Upstream 100 bases:

>100_bases
GGTAAAAGGATAATTGAATCTAACGAAAAGGCAAGAAAAACCTGGTTAGAAACAAAAATGGAATTAGGATTAATTTAATA
TTATAAAGGAGGAAATTGTT

Downstream 100 bases:

>100_bases
ACATGTCTAAAACTTCCGAAACGATACTAAATGCTCCTATTGAGAAAAGAATAAAGTATTTTGAAGACTATACCACTTCA
CATGCCACACTAATTGATGT

Product: TnsA endonuclease

Products: NA

Alternate protein names: ORF 480 [H]

Number of amino acids: Translated: 886; Mature: 885

Protein sequence:

>886_residues
MSKNFDFDYWCLKNKIPEQTKKYIENIRESPPSRNVQSGPKNVRGNYPSKKMGCTIQFESHTVELAAIYLKEYNNEIKEF
YDQPPSIPIKYKKNGQSKGMRYTPDFFVIEDDKAGWEEWKTEEDLIRLEEKNPNRYYKDTNGQWRCPPGEEYAKKYGLFF
RVRSSSEIDENLYNNTIFLEDYLRYNIEVDDITVNTIISTVTLEPGIKLDKLIKSLGEEYVDSIYHLIVSNELFVDLKNE
MLGSRMFPPPIYPDELTAKAFNYSISKTQEQRPEIIDIKIGNKINWDGRSFTIANIGETTITLISQDDNQQIDLPHNSFE
ELLQNGKVKLDKIGENTNKDNEKINEILSKASPEAMEIATKRYEEIVPILNGKNPNTDTPPRTLRNWVSNYREAEKVFGN
GYVGLLPRHKDKGNKMPQIHQRTRELMEEIIETDYENTKQKNKNSVYQKFRIECEKQGLEPSSYKTFINEINKRPNYEKV
KKREGSKASYPYEPPLRLDQNTPKHGNRPFEICHIDHTQMDIELVNSITRENMGKPWVTFMTDAFSRRLLGIYLTFDEPS
YRSIMMVVRECVRRFNRLPQNFVIDGGKEFHSIYFDSFLARYECIKKTRPPSKSRFGNVIERLFGTTHSQLIYNLQGNTQ
ATKKVRQITKGTNPKNKAIWTLEELYTVLCEWGYELYDTTPHPALSQTPRDAFNDGMVYSGKRYSRLIRYDDQFKIDTLP
STQKGTAKVQPGRGVKIDKRYFWHDQFKNPEIEYTQVPVRYDPFNMGIAYVFVNKHWVKCISEYYSVFKNRTEKELKRAS
EELRQKQSPSKSAISAKKLANFLIQIEEKESKLLKQKKERAMENQNVIDKITGNPNVDEVNVTHEPPVFNDDLIDPNENS
DTYEEF

Sequences:

>Translated_886_residues
MSKNFDFDYWCLKNKIPEQTKKYIENIRESPPSRNVQSGPKNVRGNYPSKKMGCTIQFESHTVELAAIYLKEYNNEIKEF
YDQPPSIPIKYKKNGQSKGMRYTPDFFVIEDDKAGWEEWKTEEDLIRLEEKNPNRYYKDTNGQWRCPPGEEYAKKYGLFF
RVRSSSEIDENLYNNTIFLEDYLRYNIEVDDITVNTIISTVTLEPGIKLDKLIKSLGEEYVDSIYHLIVSNELFVDLKNE
MLGSRMFPPPIYPDELTAKAFNYSISKTQEQRPEIIDIKIGNKINWDGRSFTIANIGETTITLISQDDNQQIDLPHNSFE
ELLQNGKVKLDKIGENTNKDNEKINEILSKASPEAMEIATKRYEEIVPILNGKNPNTDTPPRTLRNWVSNYREAEKVFGN
GYVGLLPRHKDKGNKMPQIHQRTRELMEEIIETDYENTKQKNKNSVYQKFRIECEKQGLEPSSYKTFINEINKRPNYEKV
KKREGSKASYPYEPPLRLDQNTPKHGNRPFEICHIDHTQMDIELVNSITRENMGKPWVTFMTDAFSRRLLGIYLTFDEPS
YRSIMMVVRECVRRFNRLPQNFVIDGGKEFHSIYFDSFLARYECIKKTRPPSKSRFGNVIERLFGTTHSQLIYNLQGNTQ
ATKKVRQITKGTNPKNKAIWTLEELYTVLCEWGYELYDTTPHPALSQTPRDAFNDGMVYSGKRYSRLIRYDDQFKIDTLP
STQKGTAKVQPGRGVKIDKRYFWHDQFKNPEIEYTQVPVRYDPFNMGIAYVFVNKHWVKCISEYYSVFKNRTEKELKRAS
EELRQKQSPSKSAISAKKLANFLIQIEEKESKLLKQKKERAMENQNVIDKITGNPNVDEVNVTHEPPVFNDDLIDPNENS
DTYEEF
>Mature_885_residues
SKNFDFDYWCLKNKIPEQTKKYIENIRESPPSRNVQSGPKNVRGNYPSKKMGCTIQFESHTVELAAIYLKEYNNEIKEFY
DQPPSIPIKYKKNGQSKGMRYTPDFFVIEDDKAGWEEWKTEEDLIRLEEKNPNRYYKDTNGQWRCPPGEEYAKKYGLFFR
VRSSSEIDENLYNNTIFLEDYLRYNIEVDDITVNTIISTVTLEPGIKLDKLIKSLGEEYVDSIYHLIVSNELFVDLKNEM
LGSRMFPPPIYPDELTAKAFNYSISKTQEQRPEIIDIKIGNKINWDGRSFTIANIGETTITLISQDDNQQIDLPHNSFEE
LLQNGKVKLDKIGENTNKDNEKINEILSKASPEAMEIATKRYEEIVPILNGKNPNTDTPPRTLRNWVSNYREAEKVFGNG
YVGLLPRHKDKGNKMPQIHQRTRELMEEIIETDYENTKQKNKNSVYQKFRIECEKQGLEPSSYKTFINEINKRPNYEKVK
KREGSKASYPYEPPLRLDQNTPKHGNRPFEICHIDHTQMDIELVNSITRENMGKPWVTFMTDAFSRRLLGIYLTFDEPSY
RSIMMVVRECVRRFNRLPQNFVIDGGKEFHSIYFDSFLARYECIKKTRPPSKSRFGNVIERLFGTTHSQLIYNLQGNTQA
TKKVRQITKGTNPKNKAIWTLEELYTVLCEWGYELYDTTPHPALSQTPRDAFNDGMVYSGKRYSRLIRYDDQFKIDTLPS
TQKGTAKVQPGRGVKIDKRYFWHDQFKNPEIEYTQVPVRYDPFNMGIAYVFVNKHWVKCISEYYSVFKNRTEKELKRASE
ELRQKQSPSKSAISAKKLANFLIQIEEKESKLLKQKKERAMENQNVIDKITGNPNVDEVNVTHEPPVFNDDLIDPNENSD
TYEEF

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR015378
- InterPro:   IPR009004 [H]

Pfam domain/function: PF09299 Mu-transpos_C; PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 103850; Mature: 103718

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKNFDFDYWCLKNKIPEQTKKYIENIRESPPSRNVQSGPKNVRGNYPSKKMGCTIQFES
CCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECC
HTVELAAIYLKEYNNEIKEFYDQPPSIPIKYKKNGQSKGMRYTPDFFVIEDDKAGWEEWK
CEEEHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEECCCEEEEECCCCCHHHHC
TEEDLIRLEEKNPNRYYKDTNGQWRCPPGEEYAKKYGLFFRVRSSSEIDENLYNNTIFLE
CHHHHHEEECCCCCCCEECCCCCEECCCCHHHHHHCCEEEEECCCCCHHHHHCCCEEEEE
DYLRYNIEVDDITVNTIISTVTLEPGIKLDKLIKSLGEEYVDSIYHLIVSNELFVDLKNE
EHHHEECEECCEEHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHEEEEHHH
MLGSRMFPPPIYPDELTAKAFNYSISKTQEQRPEIIDIKIGNKINWDGRSFTIANIGETT
HHCCCCCCCCCCCCHHHHHHHCCCHHHHHHCCCCEEEEEECCEECCCCCEEEEEECCCEE
ITLISQDDNQQIDLPHNSFEELLQNGKVKLDKIGENTNKDNEKINEILSKASPEAMEIAT
EEEEECCCCCEECCCCHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHH
KRYEEIVPILNGKNPNTDTPPRTLRNWVSNYREAEKVFGNGYVGLLPRHKDKGNKMPQIH
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHH
QRTRELMEEIIETDYENTKQKNKNSVYQKFRIECEKQGLEPSSYKTFINEINKRPNYEKV
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHH
KKREGSKASYPYEPPLRLDQNTPKHGNRPFEICHIDHTQMDIELVNSITRENMGKPWVTF
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCHHHH
MTDAFSRRLLGIYLTFDEPSYRSIMMVVRECVRRFNRLPQNFVIDGGKEFHSIYFDSFLA
HHHHHHCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHH
RYECIKKTRPPSKSRFGNVIERLFGTTHSQLIYNLQGNTQATKKVRQITKGTNPKNKAIW
HHHHHHHCCCCCHHHHHHHHHHHHCCCCHHEEEEECCCCHHHHHHHHHHCCCCCCCCCEE
TLEELYTVLCEWGYELYDTTPHPALSQTPRDAFNDGMVYSGKRYSRLIRYDDQFKIDTLP
EHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHHCCCCEECCHHHHHHHCCCCCEEEECCC
STQKGTAKVQPGRGVKIDKRYFWHDQFKNPEIEYTQVPVRYDPFNMGIAYVFVNKHWVKC
CCCCCCEEECCCCCCEECCEEEEHHCCCCCCCEEEEECEEECCCCCCEEEEEECHHHHHH
ISEYYSVFKNRTEKELKRASEELRQKQSPSKSAISAKKLANFLIQIEEKESKLLKQKKER
HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEHHHHHHHHHHHHHH
AMENQNVIDKITGNPNVDEVNVTHEPPVFNDDLIDPNENSDTYEEF
HHHCCCCHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHCC
>Mature Secondary Structure 
SKNFDFDYWCLKNKIPEQTKKYIENIRESPPSRNVQSGPKNVRGNYPSKKMGCTIQFES
CCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECC
HTVELAAIYLKEYNNEIKEFYDQPPSIPIKYKKNGQSKGMRYTPDFFVIEDDKAGWEEWK
CEEEHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEECCCEEEEECCCCCHHHHC
TEEDLIRLEEKNPNRYYKDTNGQWRCPPGEEYAKKYGLFFRVRSSSEIDENLYNNTIFLE
CHHHHHEEECCCCCCCEECCCCCEECCCCHHHHHHCCEEEEECCCCCHHHHHCCCEEEEE
DYLRYNIEVDDITVNTIISTVTLEPGIKLDKLIKSLGEEYVDSIYHLIVSNELFVDLKNE
EHHHEECEECCEEHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHEEEEHHH
MLGSRMFPPPIYPDELTAKAFNYSISKTQEQRPEIIDIKIGNKINWDGRSFTIANIGETT
HHCCCCCCCCCCCCHHHHHHHCCCHHHHHHCCCCEEEEEECCEECCCCCEEEEEECCCEE
ITLISQDDNQQIDLPHNSFEELLQNGKVKLDKIGENTNKDNEKINEILSKASPEAMEIAT
EEEEECCCCCEECCCCHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHH
KRYEEIVPILNGKNPNTDTPPRTLRNWVSNYREAEKVFGNGYVGLLPRHKDKGNKMPQIH
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHH
QRTRELMEEIIETDYENTKQKNKNSVYQKFRIECEKQGLEPSSYKTFINEINKRPNYEKV
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHH
KKREGSKASYPYEPPLRLDQNTPKHGNRPFEICHIDHTQMDIELVNSITRENMGKPWVTF
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCHHHH
MTDAFSRRLLGIYLTFDEPSYRSIMMVVRECVRRFNRLPQNFVIDGGKEFHSIYFDSFLA
HHHHHHCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHH
RYECIKKTRPPSKSRFGNVIERLFGTTHSQLIYNLQGNTQATKKVRQITKGTNPKNKAIW
HHHHHHHCCCCCHHHHHHHHHHHHCCCCHHEEEEECCCCHHHHHHHHHHCCCCCCCCCEE
TLEELYTVLCEWGYELYDTTPHPALSQTPRDAFNDGMVYSGKRYSRLIRYDDQFKIDTLP
EHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHHCCCCEECCHHHHHHHCCCCCEEEECCC
STQKGTAKVQPGRGVKIDKRYFWHDQFKNPEIEYTQVPVRYDPFNMGIAYVFVNKHWVKC
CCCCCCEEECCCCCCEECCEEEEHHCCCCCCCEEEEECEEECCCCCCEEEEEECHHHHHH
ISEYYSVFKNRTEKELKRASEELRQKQSPSKSAISAKKLANFLIQIEEKESKLLKQKKER
HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEHHHHHHHHHHHHHH
AMENQNVIDKITGNPNVDEVNVTHEPPVFNDDLIDPNENSDTYEEF
HHHCCCCHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2170815 [H]