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The map label for this gene is lytB [H]

Identifier: 188586409

GI number: 188586409

Start: 1858876

End: 1861038

Strand: Reverse

Name: lytB [H]

Synonym: Nther_1794

Alternate gene names: 188586409

Gene position: 1861038-1858876 (Counterclockwise)

Preceding gene: 188586410

Following gene: 188586408

Centisome position: 58.79

GC content: 31.35

Gene sequence:

>2163_bases
GTGGTTAGAACAACTAGTTTGATCACTTTAATTTTATTATTTTCTATTGTATTTATAGGTCTAAATTATGATGTATCGGT
ATCTGCTGATAGTCCAGGAATTACATCAAATTTGGATGAAGTTGAGGTCGGAATACTTCACAGGGAAGATGATTTGGAAT
CAAGTATAAAGCTTGAGCCCGTTTACAACAATACAGACTTAGAAATAAAATTGAACGGAACTGCTATACCAGTTTCTAAT
GGTGCAGATGGTGTAAATATTGAGAAAAAAAGTAATCGATTACTAATTAATGGTGAAACTATCGATGAATTCAATCAAGG
GAGCTCAATTTCAATTACTTATCCAATGAAAATAGGCCCGATAAGTTCTAAACAAATAAGTGAACTAGAATCAAAAGTAG
AATCCCAAGAAGAAATAACTAACATAACTACTATTCAAGAGTCTGGTGCTAAATATTTAGAAATGGAGCTAACAGAACTT
GATGCAATAAATTCAATCATGAAAATTATAAATGATAGATTATCTAAAAAAGGATATTCTTATCAGGGTGATTATTTAGT
TATTTTAGAAAAAAGTCAAGATAAACAAATGATTGAACAACGTAAAGATGAATTTAATGACTTAGATTCATTGCATACAA
TTTCTTTTGGTGATAAATGGGCTCTTCTAACTGAAATTGATCAATTAACAACAGCTTTTTCTTTGATCAATAAATATGAT
ATAAATATGGATGATTTCAAAATTTACGGTCCTGGATTTTATAGGAATAAAGACAATACTGAAGTGATTACTATTGATAG
ACCTGGTAAAATATCAATTCTCTTGACAGGTGATTATTCGGAAACAGAATTAATGAAATTAAAAGAACTTATCAGTGATA
AAACTTTTCTTGAAACTAATTTAGTAAAAGAAGGTTCCAAAGGTCTATTAATTGGAAGTTTTAATGAAACAGTTGATGAA
TCCTTAATTAAAAATTATTTAACTGACCACAAAGGTATAGCTAGTAAAATTGGAGGAAAATACAGGACGGAATTTGCAAC
TGTATCTTTGAAGGATTTTACAGAAGGAAATGATACATATCAGAAAAGTAGTTCACAGAAAGACTCTTCTCAGATAGAAG
AAATTATAATTCATGGTAATGGAAATCCAATTGAACTTGAAAATAATAATCGTTCTTATCGTGGTAAGATGAAACTAAGA
CTTAAAGATAACGGATTTATGGTTACTAATGTTGTGGGATTAGAAGACTATCTTAAAAGTGTCGTTCCCTCAGAAACCTA
TAGTTCCTGGGATATAGAAGCCTTAAAAGCTCAGGCCGTAGCTTCTAGAACTTATGCTATTTATTCACAGCAAAACAACA
ATTATAATGATTTTGACTTGACTGATTGTCAAAATTCACAAGTATATAAAGGTTATCAAGCTGAAAATTCTAAAACTACA
GAAGCTGTTAACAGTACAATGGGAGAAGCAATTTATTATAATGGTGATGTGATAAATGCACTTTATCATTCTAACTCAGG
TGGGAAAACTGAAGATCCTGAAAATGTATGGGGATCTGCTATTCCTTATTTAAGCTCAGTCGAAAGCTCATGGGATGAAG
AAGCTGAAGATAGTAATTCTGATATTTACAATTGGGAAAAACAGATTTCTCGAGAGAAAATTTCTGAAAAGCTAAATGAA
GACTATGATTTAGGAGAATTAAAGGATATTGAGATATTAGAACGAACATCAGCAGGACGAGTTAAAGAATTAATTTATAG
AGGGACAAAAGGTGAGGAAAAGATATTCGGAGATAAAAACAGAACCCCTATGGGTTTGAAAAGTACTAAATTCGAAAAAA
CTTCTAATAGAGAAGATACAGAAGTTTCTATAAAAACAGGAACAGGTAGACAAAAAAAATATGTAGAAAGAGATCAGTTA
TACGCTGTTTCCGCAGATAGTAGTATCCCTAAAGAAGTCACAGAAAGTCAGCAAGAATACTATATAAAAAGTGGCAATGG
AATAAGGGAGGTAAGAAAAATTCTCCAGTTTACTTTTTCAGGGAAAGGGTTTGGACATGGATTAGGTATGTCCCAATGGG
GTGCCCACGGAATGGCCCTTGAAGGTTATAATTACAGGGAAATTTTAAACCACTATTACAGTGATCAAATAATAATTGAA
TAA

Upstream 100 bases:

>100_bases
TCACTTTCTTTTTCCCATTAACTACTTCAATTATAATAAGTATTATCTTGTCATTGATCCTGACTTTTATAATCCGAAGA
TAAATTAAGGAGGAGATTCA

Downstream 100 bases:

>100_bases
AATAAAATAGTAAATGGGGTTGTAATATGAAATTAGAAGAATTTAATTATGAACTTCCAGAAGAATTAATCGCACAGAAA
CCACTTGCTAATAGATCTAA

Product: SpoIID/LytB domain protein

Products: NA

Alternate protein names: Cell wall-associated polypeptide CWBP76; CWBP76; Modifier protein of major autolysin [H]

Number of amino acids: Translated: 720; Mature: 720

Protein sequence:

>720_residues
MVRTTSLITLILLFSIVFIGLNYDVSVSADSPGITSNLDEVEVGILHREDDLESSIKLEPVYNNTDLEIKLNGTAIPVSN
GADGVNIEKKSNRLLINGETIDEFNQGSSISITYPMKIGPISSKQISELESKVESQEEITNITTIQESGAKYLEMELTEL
DAINSIMKIINDRLSKKGYSYQGDYLVILEKSQDKQMIEQRKDEFNDLDSLHTISFGDKWALLTEIDQLTTAFSLINKYD
INMDDFKIYGPGFYRNKDNTEVITIDRPGKISILLTGDYSETELMKLKELISDKTFLETNLVKEGSKGLLIGSFNETVDE
SLIKNYLTDHKGIASKIGGKYRTEFATVSLKDFTEGNDTYQKSSSQKDSSQIEEIIIHGNGNPIELENNNRSYRGKMKLR
LKDNGFMVTNVVGLEDYLKSVVPSETYSSWDIEALKAQAVASRTYAIYSQQNNNYNDFDLTDCQNSQVYKGYQAENSKTT
EAVNSTMGEAIYYNGDVINALYHSNSGGKTEDPENVWGSAIPYLSSVESSWDEEAEDSNSDIYNWEKQISREKISEKLNE
DYDLGELKDIEILERTSAGRVKELIYRGTKGEEKIFGDKNRTPMGLKSTKFEKTSNREDTEVSIKTGTGRQKKYVERDQL
YAVSADSSIPKEVTESQQEYYIKSGNGIREVRKILQFTFSGKGFGHGLGMSQWGAHGMALEGYNYREILNHYYSDQIIIE

Sequences:

>Translated_720_residues
MVRTTSLITLILLFSIVFIGLNYDVSVSADSPGITSNLDEVEVGILHREDDLESSIKLEPVYNNTDLEIKLNGTAIPVSN
GADGVNIEKKSNRLLINGETIDEFNQGSSISITYPMKIGPISSKQISELESKVESQEEITNITTIQESGAKYLEMELTEL
DAINSIMKIINDRLSKKGYSYQGDYLVILEKSQDKQMIEQRKDEFNDLDSLHTISFGDKWALLTEIDQLTTAFSLINKYD
INMDDFKIYGPGFYRNKDNTEVITIDRPGKISILLTGDYSETELMKLKELISDKTFLETNLVKEGSKGLLIGSFNETVDE
SLIKNYLTDHKGIASKIGGKYRTEFATVSLKDFTEGNDTYQKSSSQKDSSQIEEIIIHGNGNPIELENNNRSYRGKMKLR
LKDNGFMVTNVVGLEDYLKSVVPSETYSSWDIEALKAQAVASRTYAIYSQQNNNYNDFDLTDCQNSQVYKGYQAENSKTT
EAVNSTMGEAIYYNGDVINALYHSNSGGKTEDPENVWGSAIPYLSSVESSWDEEAEDSNSDIYNWEKQISREKISEKLNE
DYDLGELKDIEILERTSAGRVKELIYRGTKGEEKIFGDKNRTPMGLKSTKFEKTSNREDTEVSIKTGTGRQKKYVERDQL
YAVSADSSIPKEVTESQQEYYIKSGNGIREVRKILQFTFSGKGFGHGLGMSQWGAHGMALEGYNYREILNHYYSDQIIIE
>Mature_720_residues
MVRTTSLITLILLFSIVFIGLNYDVSVSADSPGITSNLDEVEVGILHREDDLESSIKLEPVYNNTDLEIKLNGTAIPVSN
GADGVNIEKKSNRLLINGETIDEFNQGSSISITYPMKIGPISSKQISELESKVESQEEITNITTIQESGAKYLEMELTEL
DAINSIMKIINDRLSKKGYSYQGDYLVILEKSQDKQMIEQRKDEFNDLDSLHTISFGDKWALLTEIDQLTTAFSLINKYD
INMDDFKIYGPGFYRNKDNTEVITIDRPGKISILLTGDYSETELMKLKELISDKTFLETNLVKEGSKGLLIGSFNETVDE
SLIKNYLTDHKGIASKIGGKYRTEFATVSLKDFTEGNDTYQKSSSQKDSSQIEEIIIHGNGNPIELENNNRSYRGKMKLR
LKDNGFMVTNVVGLEDYLKSVVPSETYSSWDIEALKAQAVASRTYAIYSQQNNNYNDFDLTDCQNSQVYKGYQAENSKTT
EAVNSTMGEAIYYNGDVINALYHSNSGGKTEDPENVWGSAIPYLSSVESSWDEEAEDSNSDIYNWEKQISREKISEKLNE
DYDLGELKDIEILERTSAGRVKELIYRGTKGEEKIFGDKNRTPMGLKSTKFEKTSNREDTEVSIKTGTGRQKKYVERDQL
YAVSADSSIPKEVTESQQEYYIKSGNGIREVRKILQFTFSGKGFGHGLGMSQWGAHGMALEGYNYREILNHYYSDQIIIE

Specific function: Possibly involved in cell wall metabolism during spore formation. Enhances the amidase activity approximately threefold [H]

COG id: COG2385

COG function: function code D; Sporulation protein and related proteins

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein. Secreted, cell wall. Note=Cell wall localization shown in PubMed:11987133 [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007253
- InterPro:   IPR013486
- InterPro:   IPR013693 [H]

Pfam domain/function: PF04122 CW_binding_2; PF08486 SpoIID [H]

EC number: NA

Molecular weight: Translated: 81203; Mature: 81203

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRTTSLITLILLFSIVFIGLNYDVSVSADSPGITSNLDEVEVGILHREDDLESSIKLEP
CCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEE
VYNNTDLEIKLNGTAIPVSNGADGVNIEKKSNRLLINGETIDEFNQGSSISITYPMKIGP
EECCCEEEEEECCEEEECCCCCCCCEEEECCCEEEEECCCHHHCCCCCEEEEEECEEECC
ISSKQISELESKVESQEEITNITTIQESGAKYLEMELTELDAINSIMKIINDRLSKKGYS
CCHHHHHHHHHHHHHHHHHHHHHEEHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCC
YQGDYLVILEKSQDKQMIEQRKDEFNDLDSLHTISFGDKWALLTEIDQLTTAFSLINKYD
CCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCC
INMDDFKIYGPGFYRNKDNTEVITIDRPGKISILLTGDYSETELMKLKELISDKTFLETN
CCCCCEEEECCCEECCCCCCEEEEEECCCEEEEEEECCCCHHHHHHHHHHHCCCHHHHHH
LVKEGSKGLLIGSFNETVDESLIKNYLTDHKGIASKIGGKYRTEFATVSLKDFTEGNDTY
HHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCHHHHHCCCEEEEEEEEEEHHCCCCCCHH
QKSSSQKDSSQIEEIIIHGNGNPIELENNNRSYRGKMKLRLKDNGFMVTNVVGLEDYLKS
HHCCCCCHHHCEEEEEEECCCCEEEEECCCCCEEEEEEEEECCCCEEEEEEECHHHHHHH
VVPSETYSSWDIEALKAQAVASRTYAIYSQQNNNYNDFDLTDCQNSQVYKGYQAENSKTT
HCCCCCCCCCCHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCCEECCEECCCCHHH
EAVNSTMGEAIYYNGDVINALYHSNSGGKTEDPENVWGSAIPYLSSVESSWDEEAEDSNS
HHHHHHHCCEEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHCCCCCC
DIYNWEKQISREKISEKLNEDYDLGELKDIEILERTSAGRVKELIYRGTKGEEKIFGDKN
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCC
RTPMGLKSTKFEKTSNREDTEVSIKTGTGRQKKYVERDQLYAVSADSSIPKEVTESQQEY
CCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHCCCCEEEEECCCCCCHHHHCCCHHE
YIKSGNGIREVRKILQFTFSGKGFGHGLGMSQWGAHGMALEGYNYREILNHYYSDQIIIE
EEECCCCHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCEEECCCCHHHHHHHHCCCEEEEC
>Mature Secondary Structure
MVRTTSLITLILLFSIVFIGLNYDVSVSADSPGITSNLDEVEVGILHREDDLESSIKLEP
CCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEE
VYNNTDLEIKLNGTAIPVSNGADGVNIEKKSNRLLINGETIDEFNQGSSISITYPMKIGP
EECCCEEEEEECCEEEECCCCCCCCEEEECCCEEEEECCCHHHCCCCCEEEEEECEEECC
ISSKQISELESKVESQEEITNITTIQESGAKYLEMELTELDAINSIMKIINDRLSKKGYS
CCHHHHHHHHHHHHHHHHHHHHHEEHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCC
YQGDYLVILEKSQDKQMIEQRKDEFNDLDSLHTISFGDKWALLTEIDQLTTAFSLINKYD
CCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCC
INMDDFKIYGPGFYRNKDNTEVITIDRPGKISILLTGDYSETELMKLKELISDKTFLETN
CCCCCEEEECCCEECCCCCCEEEEEECCCEEEEEEECCCCHHHHHHHHHHHCCCHHHHHH
LVKEGSKGLLIGSFNETVDESLIKNYLTDHKGIASKIGGKYRTEFATVSLKDFTEGNDTY
HHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCHHHHHCCCEEEEEEEEEEHHCCCCCCHH
QKSSSQKDSSQIEEIIIHGNGNPIELENNNRSYRGKMKLRLKDNGFMVTNVVGLEDYLKS
HHCCCCCHHHCEEEEEEECCCCEEEEECCCCCEEEEEEEEECCCCEEEEEEECHHHHHHH
VVPSETYSSWDIEALKAQAVASRTYAIYSQQNNNYNDFDLTDCQNSQVYKGYQAENSKTT
HCCCCCCCCCCHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCCEECCEECCCCHHH
EAVNSTMGEAIYYNGDVINALYHSNSGGKTEDPENVWGSAIPYLSSVESSWDEEAEDSNS
HHHHHHHCCEEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHCCCCCC
DIYNWEKQISREKISEKLNEDYDLGELKDIEILERTSAGRVKELIYRGTKGEEKIFGDKN
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCC
RTPMGLKSTKFEKTSNREDTEVSIKTGTGRQKKYVERDQLYAVSADSSIPKEVTESQQEY
CCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHCCCCEEEEECCCCCCHHHHCCCHHE
YIKSGNGIREVRKILQFTFSGKGFGHGLGMSQWGAHGMALEGYNYREILNHYYSDQIIIE
EEECCCCHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCEEECCCCHHHHHHHHCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1357079; 1356138; 9384377 [H]