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The map label for this gene is ycdQ [C]

Identifier: 188586196

GI number: 188586196

Start: 1659320

End: 1660330

Strand: Direct

Name: ycdQ [C]

Synonym: Nther_1578

Alternate gene names: 188586196

Gene position: 1659320-1660330 (Clockwise)

Preceding gene: 188586195

Following gene: 188586197

Centisome position: 52.42

GC content: 32.44

Gene sequence:

>1011_bases
ATGACTGTGGCAGTCTCCATCGTAATGGCTGTTTACAATGAAGAGAAATTCCTTCAACAAGCCATAGATAGTGCCTTGTC
CCAAACCTATCCCTCTACTGATCTAATTGTCGTTAATGATGGATCTACTGATTCAACCAAGACGATATTAGACAATCTAA
ATGACCAACGAGTCACTGTAATACACCTAGAAGAAAATCAAGGTGCCGCAAACGCACTAAATATTGGAATTGAACAAGCA
AGTGGAAATTGGATATCAATACACGATGCAGATGACATCAGTTATCCTACAAAAATCGAAGAACAGGTAAAGTACATTAA
ACAAAACCCTCAACTAGTAGGAGTTGGGACATTAGTGGAATATATAGCAGGTAGTCCTAATGTAACACAAAAACTGCTTA
AAAGATTAGTAAAAATCAATAAATCTGTAATATCGGCAGAACAGATAAACAAATCTAAATATTATATATGCTATCTGACT
CATAGTTCAATGATGTTCTCAAAGGAACTATTTTGGGTAGTGGGCGGTTATAACCCAGAATTTAATATCCTTTATGACTA
TGATTTATGGCTAAGACTTTTGGAAGAAGGAAATATAGCAAAAGTTCCTAAAGTATTGTTAAAATATCGCGTTCACCAGG
ATTCACTTTCTAGAAAAAACAGGTATAAGACAGTTAATGAAATTCAAATTGCATCTTCCAAGGCAATTTGTAGATTATTA
ATTCATAATAAACAGACTATACAACCAAAAGTAGTTGTTATTGGCCCTCAAAAAGCTTGTGAAAATTATGAGTGCAATAT
TGCACCTACTAGCGGTTTACAAGTTATCAGTACAATAACCAAAAATTCTAAAAAAGAAATTTCAAAAATTATTAAAAAAT
ATCACAAAGGTCAAATAGATGGAATTATAATGCTTGGTCGTTCTCCTAAACAAAAGTACCATCATATTTTGAAAACAGCT
GGATTAACTTCTAATAGAGATTATTTCACTGTTTTCAATATTCTTAAATAA

Upstream 100 bases:

>100_bases
GAAGTTCTACGTGATATATTTGGCTTACCTTTGGATTATGCCAAATATCTGATCAAAAAACAATATATTAAGGCATATCA
AGAATCTGGAGGGTATTAGC

Downstream 100 bases:

>100_bases
TTTTCCATAAAGGGGCGACTAATATGAAAACTTATAAATCAATTGTGGTTGTGCCCAGAAAATATCAATCAGTAAAGGTT
ATCCGAAACCCTTACTCATA

Product: glycosyl transferase family 2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MTVAVSIVMAVYNEEKFLQQAIDSALSQTYPSTDLIVVNDGSTDSTKTILDNLNDQRVTVIHLEENQGAANALNIGIEQA
SGNWISIHDADDISYPTKIEEQVKYIKQNPQLVGVGTLVEYIAGSPNVTQKLLKRLVKINKSVISAEQINKSKYYICYLT
HSSMMFSKELFWVVGGYNPEFNILYDYDLWLRLLEEGNIAKVPKVLLKYRVHQDSLSRKNRYKTVNEIQIASSKAICRLL
IHNKQTIQPKVVVIGPQKACENYECNIAPTSGLQVISTITKNSKKEISKIIKKYHKGQIDGIIMLGRSPKQKYHHILKTA
GLTSNRDYFTVFNILK

Sequences:

>Translated_336_residues
MTVAVSIVMAVYNEEKFLQQAIDSALSQTYPSTDLIVVNDGSTDSTKTILDNLNDQRVTVIHLEENQGAANALNIGIEQA
SGNWISIHDADDISYPTKIEEQVKYIKQNPQLVGVGTLVEYIAGSPNVTQKLLKRLVKINKSVISAEQINKSKYYICYLT
HSSMMFSKELFWVVGGYNPEFNILYDYDLWLRLLEEGNIAKVPKVLLKYRVHQDSLSRKNRYKTVNEIQIASSKAICRLL
IHNKQTIQPKVVVIGPQKACENYECNIAPTSGLQVISTITKNSKKEISKIIKKYHKGQIDGIIMLGRSPKQKYHHILKTA
GLTSNRDYFTVFNILK
>Mature_335_residues
TVAVSIVMAVYNEEKFLQQAIDSALSQTYPSTDLIVVNDGSTDSTKTILDNLNDQRVTVIHLEENQGAANALNIGIEQAS
GNWISIHDADDISYPTKIEEQVKYIKQNPQLVGVGTLVEYIAGSPNVTQKLLKRLVKINKSVISAEQINKSKYYICYLTH
SSMMFSKELFWVVGGYNPEFNILYDYDLWLRLLEEGNIAKVPKVLLKYRVHQDSLSRKNRYKTVNEIQIASSKAICRLLI
HNKQTIQPKVVVIGPQKACENYECNIAPTSGLQVISTITKNSKKEISKIIKKYHKGQIDGIIMLGRSPKQKYHHILKTAG
LTSNRDYFTVFNILK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787259, Length=158, Percent_Identity=33.5443037974684, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1790044, Length=101, Percent_Identity=35.6435643564356, Blast_Score=65, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI212640903, Length=250, Percent_Identity=24.8, Blast_Score=69, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 37982; Mature: 37851

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVAVSIVMAVYNEEKFLQQAIDSALSQTYPSTDLIVVNDGSTDSTKTILDNLNDQRVTV
CEEHHEEHHHHHCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHCCCCCEEEE
IHLEENQGAANALNIGIEQASGNWISIHDADDISYPTKIEEQVKYIKQNPQLVGVGTLVE
EEEECCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEHHHHHH
YIAGSPNVTQKLLKRLVKINKSVISAEQINKSKYYICYLTHSSMMFSKELFWVVGGYNPE
HHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHCCEEEEEEECCCCC
FNILYDYDLWLRLLEEGNIAKVPKVLLKYRVHQDSLSRKNRYKTVNEIQIASSKAICRLL
EEEEECHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHCCCHHHEEECCHHHHHHHH
IHNKQTIQPKVVVIGPQKACENYECNIAPTSGLQVISTITKNSKKEISKIIKKYHKGQID
HCCCCCCCCEEEEECCHHHCCCCCCEECCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCC
GIIMLGRSPKQKYHHILKTAGLTSNRDYFTVFNILK
EEEEECCCHHHHHHHHHHHCCCCCCCCEEEEEEECC
>Mature Secondary Structure 
TVAVSIVMAVYNEEKFLQQAIDSALSQTYPSTDLIVVNDGSTDSTKTILDNLNDQRVTV
EEHHEEHHHHHCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHCCCCCEEEE
IHLEENQGAANALNIGIEQASGNWISIHDADDISYPTKIEEQVKYIKQNPQLVGVGTLVE
EEEECCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEHHHHHH
YIAGSPNVTQKLLKRLVKINKSVISAEQINKSKYYICYLTHSSMMFSKELFWVVGGYNPE
HHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHCCEEEEEEECCCCC
FNILYDYDLWLRLLEEGNIAKVPKVLLKYRVHQDSLSRKNRYKTVNEIQIASSKAICRLL
EEEEECHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHCCCHHHEEECCHHHHHHHH
IHNKQTIQPKVVVIGPQKACENYECNIAPTSGLQVISTITKNSKKEISKIIKKYHKGQID
HCCCCCCCCEEEEECCHHHCCCCCCEECCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCC
GIIMLGRSPKQKYHHILKTAGLTSNRDYFTVFNILK
EEEEECCCHHHHHHHHHHHCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]