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The map label for this gene is yfnE [H]

Identifier: 188586189

GI number: 188586189

Start: 1651871

End: 1652899

Strand: Direct

Name: yfnE [H]

Synonym: Nther_1571

Alternate gene names: 188586189

Gene position: 1651871-1652899 (Clockwise)

Preceding gene: 188586184

Following gene: 188586190

Centisome position: 52.18

GC content: 31.97

Gene sequence:

>1029_bases
GTGGATATCAAGTTTAGTGTGATAATACCTACCCATAATAGGTCCGAACAATTATCGCTAACTTTAACCTCTTTTAATAT
ACAAACTATGAATAACTTTGAAGTCGTTGTGGTTGATGATGGTTCAACCGATAATACAAAAGACCTAGTTGAAAACTTTG
AGGCATCCTATCCATTGACTTATAAATTGATTGAAAATGCTGGTAGTGCAGCAATGGCTAGAAATAAAGGCATCTCTTGG
GCTAGCGGAAAATATCTCATTTTTTGTGATGCTGATTTTATAGTAATTCCTGAATTTATAGAAATCTTTAACAAATATAT
TGATAAAAATCCCGGGTCGGTAATTTCAGGTTTTCCTGAGTGTTGGAATAAAATTTATACTTATTTTTACCCCGACTTCA
CTGCTAGACAGAAACAAAAGCTATATCACTCCCATAACTATTCAGATAGACAAAAAAATGAATTAGCGAAATCGAAGAAG
ATTGTTCAAATTATCAAACCCCAAGATATTTACAACAATTTTAATAAAATCAAACGCCTTGCATCACCAAATTTAAAAAG
AAATATCAAAAAACAGTTTCAAAAAACTGATGTGGCTTCCTGGTTATTATTTGTTACAAGATGTGTTTTAGTTAACAAGA
AATACGTTGAAGAATTAGGCGGATTTGACGCTAGTTTTCCTAAAAATGGACTAGAAGACTGGGAGTTGGGTTATCGACTA
AGTAATATTGGAATAGACTTTATTAGCATTCCTAAAGTTTTAGGTTATCACCAAGAACATCCACTAAGAGCTCGACAAAA
TGAATTTCGCAACCTTTGTCTGATATACGATAAGTACGATTTTTCAATACCTGAGTTTAATCTGTTCGCCGTATATTGGC
CTTGGAAAAATATTAAAAAATATAAAGATAGTCTCAGGCTTTTTAAAATAAAGCAAGATAACAAAAGATTTCGTGAAGTC
CGTCAGTTACAAAATAAGTGGAAATACATGGCCATTAATTTTTATAATAAGTTTGCTGTAAAGGAGTAA

Upstream 100 bases:

>100_bases
TTATAAATACAGAATATATTATTAATAATCAAAAGTAATATTCTACTCCCCACTTAGGCAATATCAATTTTTTGGAATGG
TTATTAAGGGGGATCTTAAA

Downstream 100 bases:

>100_bases
TTCTAATTATTCCTTCATTATCATTGTCTATAGAACCCAAGTATGACATGGTTATCTGTACTTCCGCCATTGGGGAAACT
TATCACTCTATGTTAAAAAT

Product: glycosyl transferase family 2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MDIKFSVIIPTHNRSEQLSLTLTSFNIQTMNNFEVVVVDDGSTDNTKDLVENFEASYPLTYKLIENAGSAAMARNKGISW
ASGKYLIFCDADFIVIPEFIEIFNKYIDKNPGSVISGFPECWNKIYTYFYPDFTARQKQKLYHSHNYSDRQKNELAKSKK
IVQIIKPQDIYNNFNKIKRLASPNLKRNIKKQFQKTDVASWLLFVTRCVLVNKKYVEELGGFDASFPKNGLEDWELGYRL
SNIGIDFISIPKVLGYHQEHPLRARQNEFRNLCLIYDKYDFSIPEFNLFAVYWPWKNIKKYKDSLRLFKIKQDNKRFREV
RQLQNKWKYMAINFYNKFAVKE

Sequences:

>Translated_342_residues
MDIKFSVIIPTHNRSEQLSLTLTSFNIQTMNNFEVVVVDDGSTDNTKDLVENFEASYPLTYKLIENAGSAAMARNKGISW
ASGKYLIFCDADFIVIPEFIEIFNKYIDKNPGSVISGFPECWNKIYTYFYPDFTARQKQKLYHSHNYSDRQKNELAKSKK
IVQIIKPQDIYNNFNKIKRLASPNLKRNIKKQFQKTDVASWLLFVTRCVLVNKKYVEELGGFDASFPKNGLEDWELGYRL
SNIGIDFISIPKVLGYHQEHPLRARQNEFRNLCLIYDKYDFSIPEFNLFAVYWPWKNIKKYKDSLRLFKIKQDNKRFREV
RQLQNKWKYMAINFYNKFAVKE
>Mature_342_residues
MDIKFSVIIPTHNRSEQLSLTLTSFNIQTMNNFEVVVVDDGSTDNTKDLVENFEASYPLTYKLIENAGSAAMARNKGISW
ASGKYLIFCDADFIVIPEFIEIFNKYIDKNPGSVISGFPECWNKIYTYFYPDFTARQKQKLYHSHNYSDRQKNELAKSKK
IVQIIKPQDIYNNFNKIKRLASPNLKRNIKKQFQKTDVASWLLFVTRCVLVNKKYVEELGGFDASFPKNGLEDWELGYRL
SNIGIDFISIPKVLGYHQEHPLRARQNEFRNLCLIYDKYDFSIPEFNLFAVYWPWKNIKKYKDSLRLFKIKQDNKRFREV
RQLQNKWKYMAINFYNKFAVKE

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=100, Percent_Identity=37, Blast_Score=78, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 40457; Mature: 40457

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIKFSVIIPTHNRSEQLSLTLTSFNIQTMNNFEVVVVDDGSTDNTKDLVENFEASYPLT
CCEEEEEEEECCCCCCEEEEEEEEEEEEEECCEEEEEEECCCCCCHHHHHHHHCCCCCEE
YKLIENAGSAAMARNKGISWASGKYLIFCDADFIVIPEFIEIFNKYIDKNPGSVISGFPE
EEEHHCCCCHHHHHCCCCCEECCCEEEEECCCEEEHHHHHHHHHHHHCCCCCHHHCCCHH
CWNKIYTYFYPDFTARQKQKLYHSHNYSDRQKNELAKSKKIVQIIKPQDIYNNFNKIKRL
HHHHHEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
ASPNLKRNIKKQFQKTDVASWLLFVTRCVLVNKKYVEELGGFDASFPKNGLEDWELGYRL
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCEEE
SNIGIDFISIPKVLGYHQEHPLRARQNEFRNLCLIYDKYDFSIPEFNLFAVYWPWKNIKK
HHCCCCHHHHHHHHCCCCCCCCHHHHHHHCCEEEEEECCCCCCCCEEEEEEECCHHHHHH
YKDSLRLFKIKQDNKRFREVRQLQNKWKYMAINFYNKFAVKE
HHHHHEEEEECCCCHHHHHHHHHHHCCEEEEEEEECHHCCCC
>Mature Secondary Structure
MDIKFSVIIPTHNRSEQLSLTLTSFNIQTMNNFEVVVVDDGSTDNTKDLVENFEASYPLT
CCEEEEEEEECCCCCCEEEEEEEEEEEEEECCEEEEEEECCCCCCHHHHHHHHCCCCCEE
YKLIENAGSAAMARNKGISWASGKYLIFCDADFIVIPEFIEIFNKYIDKNPGSVISGFPE
EEEHHCCCCHHHHHCCCCCEECCCEEEEECCCEEEHHHHHHHHHHHHCCCCCHHHCCCHH
CWNKIYTYFYPDFTARQKQKLYHSHNYSDRQKNELAKSKKIVQIIKPQDIYNNFNKIKRL
HHHHHEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
ASPNLKRNIKKQFQKTDVASWLLFVTRCVLVNKKYVEELGGFDASFPKNGLEDWELGYRL
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCEEE
SNIGIDFISIPKVLGYHQEHPLRARQNEFRNLCLIYDKYDFSIPEFNLFAVYWPWKNIKK
HHCCCCHHHHHHHHCCCCCCCCHHHHHHHCCEEEEEECCCCCCCCEEEEEEECCHHHHHH
YKDSLRLFKIKQDNKRFREVRQLQNKWKYMAINFYNKFAVKE
HHHHHEEEEECCCCHHHHHHHHHHHCCEEEEEEEECHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]