Definition Natranaerobius thermophilus JW/NM-WN-LF, complete genome.
Accession NC_010718
Length 3,165,557

Click here to switch to the map view.

The map label for this gene is 188586176

Identifier: 188586176

GI number: 188586176

Start: 1638695

End: 1639408

Strand: Reverse

Name: 188586176

Synonym: Nther_1556

Alternate gene names: NA

Gene position: 1639408-1638695 (Counterclockwise)

Preceding gene: 188586177

Following gene: 188586174

Centisome position: 51.79

GC content: 32.35

Gene sequence:

>714_bases
TTGAACAAAAAAAATTTTGTTTCTTTATTGATTTTTATTGTAGTTATTTCACTTATAGCAATAGCTTGTACGGAAATTGA
AAACACAGTATCCGAAGAAAAAAAGAAGGAGCTAGAAAGTGAAATTGCTGATTTAGAAAGTGAAATAGATGAATTAGAAG
AAGAGTTAGAGTATAGATCAAATTATTCTGAATTGAAAAGAGATTTATCTACTGCTGAATTAAGAGTTGACCACTATACA
ATCTTTTTAGAAAAGGCTTTAGGAAAGTTAAACGAGGAAGAAGTTAAAGAGGTTGCTAAACAAGGGTATCAACATGATCT
GACAATTAGACCAACTGGAACTACTAAGAATAGAGAAGAAATACCATTAGATGGAAGAGTAAAAACTGATTTAGAAAAAT
TTTCTGTAGAAATTAGTGAAAAGCAGCGGGCTATTCCAGATCTTGGTGATTCTTTTTTAGAGAAAGCTGAAGAAAACAAA
TTAAAGTATGGTGAAAATTATCCCGAAGAACAAGAATGGTTAATAGTTAAAACAGAAGGAGTTGACTATAGACATGGAAT
AGGGGAACGTCTAGAAGGAGCTGGAGGGCACTCTTTTTGGTTAACATTTGAGGAGATAGAAAGAGGCACAACATTAGAAA
TAGAGGTAGATTCGCAAATCAAGGAGCTAACAGGTTTAGAAACTGACGTGTTAGAAATTGTAGTAGAAGAATAA

Upstream 100 bases:

>100_bases
CTATTTGGAATAGTGAATTTTTTCTAATTTATGTGTCTTAAAGCAAGTGTAGTTTATTGCTATCGCTCTAATTATATAAT
TTAGGGGAGGATTGATAAGA

Downstream 100 bases:

>100_bases
AATAACTTGACACAATATCATAATTTATGTGTCTTAAAAAATCATGATATTGTTTTAATAATCGGGGTTTATGTGAAACC
TTAGATAATTCACCTTACCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MNKKNFVSLLIFIVVISLIAIACTEIENTVSEEKKKELESEIADLESEIDELEEELEYRSNYSELKRDLSTAELRVDHYT
IFLEKALGKLNEEEVKEVAKQGYQHDLTIRPTGTTKNREEIPLDGRVKTDLEKFSVEISEKQRAIPDLGDSFLEKAEENK
LKYGENYPEEQEWLIVKTEGVDYRHGIGERLEGAGGHSFWLTFEEIERGTTLEIEVDSQIKELTGLETDVLEIVVEE

Sequences:

>Translated_237_residues
MNKKNFVSLLIFIVVISLIAIACTEIENTVSEEKKKELESEIADLESEIDELEEELEYRSNYSELKRDLSTAELRVDHYT
IFLEKALGKLNEEEVKEVAKQGYQHDLTIRPTGTTKNREEIPLDGRVKTDLEKFSVEISEKQRAIPDLGDSFLEKAEENK
LKYGENYPEEQEWLIVKTEGVDYRHGIGERLEGAGGHSFWLTFEEIERGTTLEIEVDSQIKELTGLETDVLEIVVEE
>Mature_237_residues
MNKKNFVSLLIFIVVISLIAIACTEIENTVSEEKKKELESEIADLESEIDELEEELEYRSNYSELKRDLSTAELRVDHYT
IFLEKALGKLNEEEVKEVAKQGYQHDLTIRPTGTTKNREEIPLDGRVKTDLEKFSVEISEKQRAIPDLGDSFLEKAEENK
LKYGENYPEEQEWLIVKTEGVDYRHGIGERLEGAGGHSFWLTFEEIERGTTLEIEVDSQIKELTGLETDVLEIVVEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27272; Mature: 27272

Theoretical pI: Translated: 4.19; Mature: 4.19

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKNFVSLLIFIVVISLIAIACTEIENTVSEEKKKELESEIADLESEIDELEEELEYRS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NYSELKRDLSTAELRVDHYTIFLEKALGKLNEEEVKEVAKQGYQHDLTIRPTGTTKNREE
CHHHHHHHHHHHHEEHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCC
IPLDGRVKTDLEKFSVEISEKQRAIPDLGDSFLEKAEENKLKYGENYPEEQEWLIVKTEG
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEECC
VDYRHGIGERLEGAGGHSFWLTFEEIERGTTLEIEVDSQIKELTGLETDVLEIVVEE
CCHHHCCHHHHCCCCCCEEEEEHHHHHCCCEEEEEECHHHHHHHCCHHHHHHHHCCC
>Mature Secondary Structure
MNKKNFVSLLIFIVVISLIAIACTEIENTVSEEKKKELESEIADLESEIDELEEELEYRS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NYSELKRDLSTAELRVDHYTIFLEKALGKLNEEEVKEVAKQGYQHDLTIRPTGTTKNREE
CHHHHHHHHHHHHEEHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCC
IPLDGRVKTDLEKFSVEISEKQRAIPDLGDSFLEKAEENKLKYGENYPEEQEWLIVKTEG
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEECC
VDYRHGIGERLEGAGGHSFWLTFEEIERGTTLEIEVDSQIKELTGLETDVLEIVVEE
CCHHHCCHHHHCCCCCCEEEEEHHHHHCCCEEEEEECHHHHHHHCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA