| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is mutL [H]
Identifier: 188586123
GI number: 188586123
Start: 1570359
End: 1572401
Strand: Direct
Name: mutL [H]
Synonym: Nther_1497
Alternate gene names: 188586123
Gene position: 1570359-1572401 (Clockwise)
Preceding gene: 188586122
Following gene: 188586124
Centisome position: 49.61
GC content: 34.31
Gene sequence:
>2043_bases ATGGGTCGGATAAACATATTGAGACATGAAATATCAGAAAAAATAGCTGCTGGTGAAGTGGTGGAACGTCCCGCCTCTGT AGTTAAAGAATTAATTGAAAACTCCATTGATGCAGGTAGTGATAATATCCAAATATTCTTATCTAAGGCCGGCAAAGAAT TGATTCGCGTGATTGACAATGGCCTAGGGATTCATCCCGAAGATGTAGAGCTAGCTTTCTCTAGGCATGCCACAAGTAAG GTTAATAGTATCAAGGACCTTGATAAAATAAATACATTAGGTTTTCGGGGTGAAGCCCTGGCTAGTATTGCTGCAGTAAG TAAAATTGAAATGAATACCAGGCGCCACGATAGTAAAGAGGGAACTAGAGTGTTCCTTGAAGAGGGGAAAGTTCAACAAC GAGGTAGTGCGGGGTGTCCACCTGGGACCGATATTGCAGTGAAAGATTTATTTTACAACACCCCCGCCAGGTTAAAATTT CTCAGCAAAGAAAGTACTGAAATTGCGTTAATCCATGATATAATTAATAAATTTGCACTGGCAAATCCTAATATTAGATT CAGGGCATTAAACGGGAATAAAAAGCTTTTGCAGACCTCAGGCAGAAACGATATGCTAGAAGTGATAGCTAATATATACG GCTATCAAACTGCGAAAAAACTGTTACCAATAAAATATTCTCAAGATGGTATTACCATTACAGGTTACATAGCAAAGCCG GAACTGACCCGATCTAATAGAAGTTATCAAACTTTTTTCGTAAACGATAGATATGTAAAAAGCACCTTTTTATCCGAAAG ATTAGAAAAAGGGTATCATACATTGCTTCCAAAACATAGATATCCTTTTTCAATATTGAAACTTCAAGTACCTGATGAGA TATTAGATGTAAATGTGCACCCAGCGAAAATACATGTTAGATTCATAAATGAAAAACAAATTGGAAATATGTTAACAAAA GCTGTGACAGAGAAATTAAAACAAGAACAATTGATTTTTCAAGCTCCCAAAGTTAATAATACTAAGAAAAACCAAACTAA ACCGGAAGGCTCTCAACTTCGTTTTAGAGGTGTTAACAAGAATAATGCTCCCAGTTTCGAGAAAACCTCAAGTAAGTTTA AAAGTCAATTAAATAATAATGTTTATGATAACATTTCTTCTAAAACTAGTAACAACTACTTAAAAGAAAAACAGGAATAT GATATTCCAAGAATTAATAATAAAGTAGACCACACAAAAAACCATATAGAAAACCAAACAGAAAACCATATAGAAACACA TCAAAAAACACAAGAAATAGGTGATCAAGAAAAGACTAGTGATAGTGTTCATTACGGTAGTAATCCAAGTAGTAAACCAA TTGGTGATTCAAGTGGTAAACTAAGTGATGATTCAAGTGGTGAATCATATAGTGATCATATAGATACCATAGATTTAGCT GATAATAATGAAAACTTTTTACATGATTTACTTGAATATCGCGTCGTTGGCCAAATTTTTACTACTTATTGGATTCTAGA ATCTAGTGATGAAATTTATTTAATAGATCAACATGCTGCCCATGAACGAATAAATTATCAATTATTAATGGATAGATATC GCTCTTCTCAACTAAAAAGCCAACAGGTTATTCCCTATACATTAGAGTTGGACAGTGCTGGTATAACAGCCCTAGAAGAT AATTTAGATAAACTGCGCCAGTGTGGCTTGGAATTCGAATTCTTTGGTCAAAACACTTTATTAGTGAGAGGAGTTCCCTT TGCAATTAAAGATATCTTCGATCAAGATGCAATTTATGATCTGATTGATCAGTTGATAAAACATCCTGATAACGATCTGG ATATAACAAGCCTGGAAGAAATGTTAATTACCATTGCTTGTAAAAAAAGTATTAAAGCTAATGAAAAGATCGGAGCAAAA GAATTAAAATCTTTGTTAAAGTCCCTTGTGGAAACACCTACGCCTTTTACCTGTCCTCATGGACGGCCTACAATTATAAA CTTAACCAGAACAGATGTAGAAAAACTGTTTTACCGAGTTTAA
Upstream 100 bases:
>100_bases GATAAAGCTCAGAAATTTAAAGAATAGGCGACTATAACTTAAAAAACGCCAAAGAGATAAAAAGCTAAAGGGGATCAAAA GGGATAGGGGGTTAGCTCAA
Downstream 100 bases:
>100_bases TAAACTTAGCAGAATGCTATAAAAAATTTTGCTAGTTATTGGGGTGAAAAAATTTATGATGAACACATATGACAATCAAC ACCGTGAACAACAAAAGTTG
Product: DNA mismatch repair protein MutL
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 680; Mature: 679
Protein sequence:
>680_residues MGRINILRHEISEKIAAGEVVERPASVVKELIENSIDAGSDNIQIFLSKAGKELIRVIDNGLGIHPEDVELAFSRHATSK VNSIKDLDKINTLGFRGEALASIAAVSKIEMNTRRHDSKEGTRVFLEEGKVQQRGSAGCPPGTDIAVKDLFYNTPARLKF LSKESTEIALIHDIINKFALANPNIRFRALNGNKKLLQTSGRNDMLEVIANIYGYQTAKKLLPIKYSQDGITITGYIAKP ELTRSNRSYQTFFVNDRYVKSTFLSERLEKGYHTLLPKHRYPFSILKLQVPDEILDVNVHPAKIHVRFINEKQIGNMLTK AVTEKLKQEQLIFQAPKVNNTKKNQTKPEGSQLRFRGVNKNNAPSFEKTSSKFKSQLNNNVYDNISSKTSNNYLKEKQEY DIPRINNKVDHTKNHIENQTENHIETHQKTQEIGDQEKTSDSVHYGSNPSSKPIGDSSGKLSDDSSGESYSDHIDTIDLA DNNENFLHDLLEYRVVGQIFTTYWILESSDEIYLIDQHAAHERINYQLLMDRYRSSQLKSQQVIPYTLELDSAGITALED NLDKLRQCGLEFEFFGQNTLLVRGVPFAIKDIFDQDAIYDLIDQLIKHPDNDLDITSLEEMLITIACKKSIKANEKIGAK ELKSLLKSLVETPTPFTCPHGRPTIINLTRTDVEKLFYRV
Sequences:
>Translated_680_residues MGRINILRHEISEKIAAGEVVERPASVVKELIENSIDAGSDNIQIFLSKAGKELIRVIDNGLGIHPEDVELAFSRHATSK VNSIKDLDKINTLGFRGEALASIAAVSKIEMNTRRHDSKEGTRVFLEEGKVQQRGSAGCPPGTDIAVKDLFYNTPARLKF LSKESTEIALIHDIINKFALANPNIRFRALNGNKKLLQTSGRNDMLEVIANIYGYQTAKKLLPIKYSQDGITITGYIAKP ELTRSNRSYQTFFVNDRYVKSTFLSERLEKGYHTLLPKHRYPFSILKLQVPDEILDVNVHPAKIHVRFINEKQIGNMLTK AVTEKLKQEQLIFQAPKVNNTKKNQTKPEGSQLRFRGVNKNNAPSFEKTSSKFKSQLNNNVYDNISSKTSNNYLKEKQEY DIPRINNKVDHTKNHIENQTENHIETHQKTQEIGDQEKTSDSVHYGSNPSSKPIGDSSGKLSDDSSGESYSDHIDTIDLA DNNENFLHDLLEYRVVGQIFTTYWILESSDEIYLIDQHAAHERINYQLLMDRYRSSQLKSQQVIPYTLELDSAGITALED NLDKLRQCGLEFEFFGQNTLLVRGVPFAIKDIFDQDAIYDLIDQLIKHPDNDLDITSLEEMLITIACKKSIKANEKIGAK ELKSLLKSLVETPTPFTCPHGRPTIINLTRTDVEKLFYRV >Mature_679_residues GRINILRHEISEKIAAGEVVERPASVVKELIENSIDAGSDNIQIFLSKAGKELIRVIDNGLGIHPEDVELAFSRHATSKV NSIKDLDKINTLGFRGEALASIAAVSKIEMNTRRHDSKEGTRVFLEEGKVQQRGSAGCPPGTDIAVKDLFYNTPARLKFL SKESTEIALIHDIINKFALANPNIRFRALNGNKKLLQTSGRNDMLEVIANIYGYQTAKKLLPIKYSQDGITITGYIAKPE LTRSNRSYQTFFVNDRYVKSTFLSERLEKGYHTLLPKHRYPFSILKLQVPDEILDVNVHPAKIHVRFINEKQIGNMLTKA VTEKLKQEQLIFQAPKVNNTKKNQTKPEGSQLRFRGVNKNNAPSFEKTSSKFKSQLNNNVYDNISSKTSNNYLKEKQEYD IPRINNKVDHTKNHIENQTENHIETHQKTQEIGDQEKTSDSVHYGSNPSSKPIGDSSGKLSDDSSGESYSDHIDTIDLAD NNENFLHDLLEYRVVGQIFTTYWILESSDEIYLIDQHAAHERINYQLLMDRYRSSQLKSQQVIPYTLELDSAGITALEDN LDKLRQCGLEFEFFGQNTLLVRGVPFAIKDIFDQDAIYDLIDQLIKHPDNDLDITSLEEMLITIACKKSIKANEKIGAKE LKSLLKSLVETPTPFTCPHGRPTIINLTRTDVEKLFYRV
Specific function: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-bindi
COG id: COG0323
COG function: function code L; DNA mismatch repair enzyme (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA mismatch repair mutL/hexB family [H]
Homologues:
Organism=Homo sapiens, GI4557757, Length=337, Percent_Identity=35.3115727002967, Blast_Score=193, Evalue=6e-49, Organism=Homo sapiens, GI4505913, Length=326, Percent_Identity=31.5950920245399, Blast_Score=157, Evalue=3e-38, Organism=Homo sapiens, GI310128478, Length=326, Percent_Identity=31.5950920245399, Blast_Score=157, Evalue=3e-38, Organism=Homo sapiens, GI189458898, Length=314, Percent_Identity=29.2993630573248, Blast_Score=132, Evalue=8e-31, Organism=Homo sapiens, GI4505911, Length=314, Percent_Identity=29.2993630573248, Blast_Score=132, Evalue=8e-31, Organism=Homo sapiens, GI310128480, Length=293, Percent_Identity=29.6928327645051, Blast_Score=126, Evalue=7e-29, Organism=Homo sapiens, GI91992162, Length=359, Percent_Identity=28.4122562674095, Blast_Score=120, Evalue=3e-27, Organism=Homo sapiens, GI91992160, Length=359, Percent_Identity=28.4122562674095, Blast_Score=120, Evalue=4e-27, Organism=Homo sapiens, GI189458896, Length=312, Percent_Identity=28.2051282051282, Blast_Score=117, Evalue=4e-26, Organism=Homo sapiens, GI263191589, Length=241, Percent_Identity=30.7053941908714, Blast_Score=102, Evalue=1e-21, Organism=Escherichia coli, GI1790612, Length=334, Percent_Identity=37.4251497005988, Blast_Score=210, Evalue=2e-55, Organism=Caenorhabditis elegans, GI71991825, Length=399, Percent_Identity=31.8295739348371, Blast_Score=185, Evalue=6e-47, Organism=Caenorhabditis elegans, GI17562796, Length=347, Percent_Identity=30.835734870317, Blast_Score=146, Evalue=4e-35, Organism=Saccharomyces cerevisiae, GI6323819, Length=320, Percent_Identity=32.1875, Blast_Score=170, Evalue=8e-43, Organism=Saccharomyces cerevisiae, GI6324247, Length=358, Percent_Identity=28.2122905027933, Blast_Score=139, Evalue=1e-33, Organism=Saccharomyces cerevisiae, GI6325093, Length=761, Percent_Identity=22.2076215505913, Blast_Score=105, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6323063, Length=194, Percent_Identity=29.8969072164948, Blast_Score=78, Evalue=4e-15, Organism=Drosophila melanogaster, GI17136968, Length=329, Percent_Identity=34.6504559270517, Blast_Score=194, Evalue=2e-49, Organism=Drosophila melanogaster, GI17136970, Length=363, Percent_Identity=28.3746556473829, Blast_Score=133, Evalue=4e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR002099 - InterPro: IPR013507 - InterPro: IPR014762 - InterPro: IPR020667 - InterPro: IPR014763 - InterPro: IPR014790 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF01119 DNA_mis_repair; PF02518 HATPase_c; PF08676 MutL_C [H]
EC number: NA
Molecular weight: Translated: 77136; Mature: 77005
Theoretical pI: Translated: 7.37; Mature: 7.37
Prosite motif: PS00058 DNA_MISMATCH_REPAIR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRINILRHEISEKIAAGEVVERPASVVKELIENSIDAGSDNIQIFLSKAGKELIRVIDN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHC GLGIHPEDVELAFSRHATSKVNSIKDLDKINTLGFRGEALASIAAVSKIEMNTRRHDSKE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCC GTRVFLEEGKVQQRGSAGCPPGTDIAVKDLFYNTPARLKFLSKESTEIALIHDIINKFAL CCEEEEECCCHHCCCCCCCCCCCCHHHHHHHHCCCHHEEEECCCCCCCHHHHHHHHHHHC ANPNIRFRALNGNKKLLQTSGRNDMLEVIANIYGYQTAKKLLPIKYSQDGITITGYIAKP CCCCEEEEEECCCCCEECCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEEEEECC ELTRSNRSYQTFFVNDRYVKSTFLSERLEKGYHTLLPKHRYPFSILKLQVPDEILDVNVH CCCCCCCCEEEEEECCHHHHHHHHHHHHHCCHHHHCCCCCCCEEEEEEECCHHHHCCCCC PAKIHVRFINEKQIGNMLTKAVTEKLKQEQLIFQAPKVNNTKKNQTKPEGSQLRFRGVNK CEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCEEEEECCC NNAPSFEKTSSKFKSQLNNNVYDNISSKTSNNYLKEKQEYDIPRINNKVDHTKNHIENQT CCCCCHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCCH ENHIETHQKTQEIGDQEKTSDSVHYGSNPSSKPIGDSSGKLSDDSSGESYSDHIDTIDLA HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC DNNENFLHDLLEYRVVGQIFTTYWILESSDEIYLIDQHAAHERINYQLLMDRYRSSQLKS CCCHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCC QQVIPYTLELDSAGITALEDNLDKLRQCGLEFEFFGQNTLLVRGVPFAIKDIFDQDAIYD CCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEECCCEEEEECCCHHHHHHHCCHHHHH LIDQLIKHPDNDLDITSLEEMLITIACKKSIKANEKIGAKELKSLLKSLVETPTPFTCPH HHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC GRPTIINLTRTDVEKLFYRV CCCEEEEEHHHHHHHHHHCC >Mature Secondary Structure GRINILRHEISEKIAAGEVVERPASVVKELIENSIDAGSDNIQIFLSKAGKELIRVIDN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHC GLGIHPEDVELAFSRHATSKVNSIKDLDKINTLGFRGEALASIAAVSKIEMNTRRHDSKE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCC GTRVFLEEGKVQQRGSAGCPPGTDIAVKDLFYNTPARLKFLSKESTEIALIHDIINKFAL CCEEEEECCCHHCCCCCCCCCCCCHHHHHHHHCCCHHEEEECCCCCCCHHHHHHHHHHHC ANPNIRFRALNGNKKLLQTSGRNDMLEVIANIYGYQTAKKLLPIKYSQDGITITGYIAKP CCCCEEEEEECCCCCEECCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEEEEECC ELTRSNRSYQTFFVNDRYVKSTFLSERLEKGYHTLLPKHRYPFSILKLQVPDEILDVNVH CCCCCCCCEEEEEECCHHHHHHHHHHHHHCCHHHHCCCCCCCEEEEEEECCHHHHCCCCC PAKIHVRFINEKQIGNMLTKAVTEKLKQEQLIFQAPKVNNTKKNQTKPEGSQLRFRGVNK CEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCEEEEECCC NNAPSFEKTSSKFKSQLNNNVYDNISSKTSNNYLKEKQEYDIPRINNKVDHTKNHIENQT CCCCCHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCCH ENHIETHQKTQEIGDQEKTSDSVHYGSNPSSKPIGDSSGKLSDDSSGESYSDHIDTIDLA HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC DNNENFLHDLLEYRVVGQIFTTYWILESSDEIYLIDQHAAHERINYQLLMDRYRSSQLKS CCCHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCC QQVIPYTLELDSAGITALEDNLDKLRQCGLEFEFFGQNTLLVRGVPFAIKDIFDQDAIYD CCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEECCCEEEEECCCHHHHHHHCCHHHHH LIDQLIKHPDNDLDITSLEEMLITIACKKSIKANEKIGAKELKSLLKSLVETPTPFTCPH HHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC GRPTIINLTRTDVEKLFYRV CCCEEEEEHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]