Click here to switch to the map view.

The map label for this gene is recA [H]

Identifier: 188586099

GI number: 188586099

Start: 1546216

End: 1547310

Strand: Direct

Name: recA [H]

Synonym: Nther_1473

Alternate gene names: 188586099

Gene position: 1546216-1547310 (Clockwise)

Preceding gene: 188586098

Following gene: 188586100

Centisome position: 48.84

GC content: 40.0

Gene sequence:

>1095_bases
ATGGAAAAACAAAAAGCTTTAGATATGGCTTTGTCCCAGATAGAAAAGCAGTTTGGTAAAGGTTCTATTATGAAACTGGG
AGAAAGTAATGCTAAAATGAATGTGGAAGTTATTCCTACAGGAGCATTATCTTTAGATATTGCATTAGGGATTGGAGGAT
TACCTAGAGGTAGGGTGGTTGAAGTTTACGGCCCAGAATCCTCTGGTAAAACAACTGTGGCCCTTCATGCGGTAGCAGAA
GCTCAGAAAAACGGTGGGAATGCCGCTTTTATTGATGCAGAACACGCATTAGACCCTGCTTATGCTCGTAACTTGGGAGT
TAATATTGACGAATTGTTGGTTTCACAACCAGATACAGGCGAGCAGGCCTTAGAAATAGCTGAATCCCTAGTAAGAAGTG
GGGCTATAGATGTGATTGTGGTAGATTCTGTGGCTGCTCTGGTTCCCAAGGCCGAAATTGAAGGGGAAATGGGAGATTCT
CATGTAGGCTTACAAGCTAGATTAATGTCTCAGGCACTGCGAAAACTGTCAGGTTCTATTAGGAAGTCACGAACTACTGC
CGTCTTTATTAATCAGATTAGGGAAAAAGTTGGAGTTATGTTTGGAAATCCTGAAACTACACCGGGGGGACGAGCTTTAA
AGTTCTACTCTTCTGTCAGGATAGAGGTTAGAAGAATTGAATCTTTGAAAAAAGGTAATGACATTATTGGAAATAGAACC
AGGGGCAAAGTAGTTAAAAACAAAGTAGCACCTCCATTTAAAAAAGCAGAATTTGACATAATGTATGGTGAGGGGATTTC
CAAGGAAAGTAATATCTTGGACTTAGCCAGTGAATTAAATATTGTCACTAAGAGTGGACCTTGGTATTCCTATGGAGAAG
ACCGCTTAGGACAGGGTAAAGAAAATGCCAGAAATTACCTAAGAGATAATCCTGATATAGCTGAGGCCATCGAACTACAG
ATTTTGGACAATTATAACTTAGGGACCAACAATCAACAAGATCAAGGTCAAGAAAGTGAAGAACAAACCAAAAGTTCTAA
CAAAGATGCTAAAGAAACTACTGGCAAAAAAACTACCAAGTCAAACAAGGCCTGA

Upstream 100 bases:

>100_bases
TTAGACTGTATTAAAATTAAGCTTGAATGTTGATAACTGTAAAATTTCAATTTCACAGCTTTTCTGAGATAGTAATTTAA
TGAAACGGGAGGGGAAGTTT

Downstream 100 bases:

>100_bases
TTTAAATGTGTGATGAAAACAAGCACTATGAACAAGCTTTAAACCAAAGTTTTAAATATCTATCTATTCGTCCTAGATCA
CAGAAAGAAATCTTTCAATA

Product: RecA protein

Products: NA

Alternate protein names: Recombinase A [H]

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MEKQKALDMALSQIEKQFGKGSIMKLGESNAKMNVEVIPTGALSLDIALGIGGLPRGRVVEVYGPESSGKTTVALHAVAE
AQKNGGNAAFIDAEHALDPAYARNLGVNIDELLVSQPDTGEQALEIAESLVRSGAIDVIVVDSVAALVPKAEIEGEMGDS
HVGLQARLMSQALRKLSGSIRKSRTTAVFINQIREKVGVMFGNPETTPGGRALKFYSSVRIEVRRIESLKKGNDIIGNRT
RGKVVKNKVAPPFKKAEFDIMYGEGISKESNILDLASELNIVTKSGPWYSYGEDRLGQGKENARNYLRDNPDIAEAIELQ
ILDNYNLGTNNQQDQGQESEEQTKSSNKDAKETTGKKTTKSNKA

Sequences:

>Translated_364_residues
MEKQKALDMALSQIEKQFGKGSIMKLGESNAKMNVEVIPTGALSLDIALGIGGLPRGRVVEVYGPESSGKTTVALHAVAE
AQKNGGNAAFIDAEHALDPAYARNLGVNIDELLVSQPDTGEQALEIAESLVRSGAIDVIVVDSVAALVPKAEIEGEMGDS
HVGLQARLMSQALRKLSGSIRKSRTTAVFINQIREKVGVMFGNPETTPGGRALKFYSSVRIEVRRIESLKKGNDIIGNRT
RGKVVKNKVAPPFKKAEFDIMYGEGISKESNILDLASELNIVTKSGPWYSYGEDRLGQGKENARNYLRDNPDIAEAIELQ
ILDNYNLGTNNQQDQGQESEEQTKSSNKDAKETTGKKTTKSNKA
>Mature_364_residues
MEKQKALDMALSQIEKQFGKGSIMKLGESNAKMNVEVIPTGALSLDIALGIGGLPRGRVVEVYGPESSGKTTVALHAVAE
AQKNGGNAAFIDAEHALDPAYARNLGVNIDELLVSQPDTGEQALEIAESLVRSGAIDVIVVDSVAALVPKAEIEGEMGDS
HVGLQARLMSQALRKLSGSIRKSRTTAVFINQIREKVGVMFGNPETTPGGRALKFYSSVRIEVRRIESLKKGNDIIGNRT
RGKVVKNKVAPPFKKAEFDIMYGEGISKESNILDLASELNIVTKSGPWYSYGEDRLGQGKENARNYLRDNPDIAEAIELQ
ILDNYNLGTNNQQDQGQESEEQTKSSNKDAKETTGKKTTKSNKA

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family [H]

Homologues:

Organism=Escherichia coli, GI1789051, Length=347, Percent_Identity=61.671469740634, Blast_Score=443, Evalue=1e-126,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587 [H]

Pfam domain/function: PF00154 RecA [H]

EC number: NA

Molecular weight: Translated: 39358; Mature: 39358

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: PS00321 RECA_1 ; PS50162 RECA_2 ; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKQKALDMALSQIEKQFGKGSIMKLGESNAKMNVEVIPTGALSLDIALGIGGLPRGRVV
CCHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEEECCCEEEEEEECCCCCCCCCEE
EVYGPESSGKTTVALHAVAEAQKNGGNAAFIDAEHALDPAYARNLGVNIDELLVSQPDTG
EEECCCCCCCEEEEEEEHHHHHHCCCCEEEEEHHHHCCHHHHHHCCCCHHHHHCCCCCCH
EQALEIAESLVRSGAIDVIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGSI
HHHHHHHHHHHHCCCEEEEEECHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
RKSRTTAVFINQIREKVGVMFGNPETTPGGRALKFYSSVRIEVRRIESLKKGNDIIGNRT
HHHHHHHHHHHHHHHHHCEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCC
RGKVVKNKVAPPFKKAEFDIMYGEGISKESNILDLASELNIVTKSGPWYSYGEDRLGQGK
CCHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHCCEEECCCCCCCCCCHHCCCCH
ENARNYLRDNPDIAEAIELQILDNYNLGTNNQQDQGQESEEQTKSSNKDAKETTGKKTTK
HHHHHHHCCCCCHHHEEEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCHHHHCCCCCCC
SNKA
CCCC
>Mature Secondary Structure
MEKQKALDMALSQIEKQFGKGSIMKLGESNAKMNVEVIPTGALSLDIALGIGGLPRGRVV
CCHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEEECCCEEEEEEECCCCCCCCCEE
EVYGPESSGKTTVALHAVAEAQKNGGNAAFIDAEHALDPAYARNLGVNIDELLVSQPDTG
EEECCCCCCCEEEEEEEHHHHHHCCCCEEEEEHHHHCCHHHHHHCCCCHHHHHCCCCCCH
EQALEIAESLVRSGAIDVIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGSI
HHHHHHHHHHHHCCCEEEEEECHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
RKSRTTAVFINQIREKVGVMFGNPETTPGGRALKFYSSVRIEVRRIESLKKGNDIIGNRT
HHHHHHHHHHHHHHHHHCEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCC
RGKVVKNKVAPPFKKAEFDIMYGEGISKESNILDLASELNIVTKSGPWYSYGEDRLGQGK
CCHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHCCEEECCCCCCCCCCHHCCCCH
ENARNYLRDNPDIAEAIELQILDNYNLGTNNQQDQGQESEEQTKSSNKDAKETTGKKTTK
HHHHHHHCCCCCHHHEEEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCHHHHCCCCCCC
SNKA
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]