| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is dapG [H]
Identifier: 188586084
GI number: 188586084
Start: 1527033
End: 1528271
Strand: Direct
Name: dapG [H]
Synonym: Nther_1458
Alternate gene names: 188586084
Gene position: 1527033-1528271 (Clockwise)
Preceding gene: 188586083
Following gene: 188586085
Centisome position: 48.24
GC content: 36.24
Gene sequence:
>1239_bases ATGACTGAAGATAAAATTATTGTCCAAAAATTTGGGGGTTCTTCTTTAAGGACACCAGATTTAAGACAACAAGCCGTTGA ACACATTAAACAGCTAGTTCAGAATGATAAAAAGGTACTGGTAGTTGTAAGTGCCATTGGCAGAAGTCCTGACCCGTATG CAACCGATACTTTGATAAATTTAATTAAAGAAGAAAATCCAGATCCAGACTTACGAGAACTAGACTTGGCTGTAAGTTGC GGTGAAGTGCTATCTAGTGCTTTACTTGCCTCTAAATTACAGGCAGAGGGATATAAAGCGACAGCTTTGACAGGGCGACA AGCTGGTATTATAACAGATAAAAACTTTACAGATGGTTCAATTAGAGAAATCAAAACTTCAATTATTCAAAAACTGTTTA ACCAGAACAAAATTATTGTCGTCGCTGGTTTTCAAGGTGTAACTCCCAATGGTGAAATTATCACACTGGGAAGAGGTGGA AGTGATACAACTGCAACGGCCTTTGCAGGGGAACTTGGCGCACAAAGGGTGGAAATATACAGTGATGTCGATGGCCTGAT GACTGTTGATCCCAAAATGGTTCCTGATGCCCGACCAATTAAAGTTATCACCTTTTATGAAGTTCTACAAATGGCAAGAG AAGGTGTCAAAGTGATTCATCCTAAAGCAGTTGAGTATGCCATGAAAAATTCAATACCAATTTTCATAAAAAATATTAAT AAATATTATCAGGAAATAGGGACTAAAATAACGAGTTATATCTCAGACAAAGAAGAAGAACAGTCGAATAAAATTATCAC AGGCATTGCCCACCTTCCCAATATTACTCAAGTCTCATTAGAGCTTGCCGAAAATACTTCACAAAGCGTGAAAGTTGATA TTTTTAACGCTTTAGCTGAACAGGGTATCAGCCTGGATATGATTACTATTTATTACAACAATATAACTTTTACAGTTAAG GGTGAAGACACTGAAAAAACCATTAAGCTATTGAATGAACGTGGTTTCGGTCAAATTAATCATCTAAGTGGTTGTGCCAA AATTACACTATTTGGAACTGGGATGACAGGACTTCCTGGAGTAATGGCTAAAGCTCTAAGAATTTTAAATAAAGAAGAAA TTGAAGTTCTACAAACAACTGATTCCAATATTACCATATCCTGTTTAATCCAGGGCAAGGATATTCAAAAAGCTTTGTTA GTTTTGCACGAACAATTTGGTCTGTCTCTTAAAAATTAA
Upstream 100 bases:
>100_bases CTGTGATCAGTAAAATGGACTTAATTATCCCGACAATACAACATGCATTAGAAGGTGAACAATTGCAACCCTTGTTATTG GCAGGAGAGGAGTAATACTG
Downstream 100 bases:
>100_bases ACCAAAAGGGGGAGAAACATTGAGAGGGTTTGGTGAGTTAATAACTGCCATGATCACACCCTTTAACAAGCAAGGTGAAC TGGCAACCGAAAATTGTGTA
Product: aspartate kinase
Products: NA
Alternate protein names: Aspartate kinase 1; Aspartokinase I [H]
Number of amino acids: Translated: 412; Mature: 411
Protein sequence:
>412_residues MTEDKIIVQKFGGSSLRTPDLRQQAVEHIKQLVQNDKKVLVVVSAIGRSPDPYATDTLINLIKEENPDPDLRELDLAVSC GEVLSSALLASKLQAEGYKATALTGRQAGIITDKNFTDGSIREIKTSIIQKLFNQNKIIVVAGFQGVTPNGEIITLGRGG SDTTATAFAGELGAQRVEIYSDVDGLMTVDPKMVPDARPIKVITFYEVLQMAREGVKVIHPKAVEYAMKNSIPIFIKNIN KYYQEIGTKITSYISDKEEEQSNKIITGIAHLPNITQVSLELAENTSQSVKVDIFNALAEQGISLDMITIYYNNITFTVK GEDTEKTIKLLNERGFGQINHLSGCAKITLFGTGMTGLPGVMAKALRILNKEEIEVLQTTDSNITISCLIQGKDIQKALL VLHEQFGLSLKN
Sequences:
>Translated_412_residues MTEDKIIVQKFGGSSLRTPDLRQQAVEHIKQLVQNDKKVLVVVSAIGRSPDPYATDTLINLIKEENPDPDLRELDLAVSC GEVLSSALLASKLQAEGYKATALTGRQAGIITDKNFTDGSIREIKTSIIQKLFNQNKIIVVAGFQGVTPNGEIITLGRGG SDTTATAFAGELGAQRVEIYSDVDGLMTVDPKMVPDARPIKVITFYEVLQMAREGVKVIHPKAVEYAMKNSIPIFIKNIN KYYQEIGTKITSYISDKEEEQSNKIITGIAHLPNITQVSLELAENTSQSVKVDIFNALAEQGISLDMITIYYNNITFTVK GEDTEKTIKLLNERGFGQINHLSGCAKITLFGTGMTGLPGVMAKALRILNKEEIEVLQTTDSNITISCLIQGKDIQKALL VLHEQFGLSLKN >Mature_411_residues TEDKIIVQKFGGSSLRTPDLRQQAVEHIKQLVQNDKKVLVVVSAIGRSPDPYATDTLINLIKEENPDPDLRELDLAVSCG EVLSSALLASKLQAEGYKATALTGRQAGIITDKNFTDGSIREIKTSIIQKLFNQNKIIVVAGFQGVTPNGEIITLGRGGS DTTATAFAGELGAQRVEIYSDVDGLMTVDPKMVPDARPIKVITFYEVLQMAREGVKVIHPKAVEYAMKNSIPIFIKNINK YYQEIGTKITSYISDKEEEQSNKIITGIAHLPNITQVSLELAENTSQSVKVDIFNALAEQGISLDMITIYYNNITFTVKG EDTEKTIKLLNERGFGQINHLSGCAKITLFGTGMTGLPGVMAKALRILNKEEIEVLQTTDSNITISCLIQGKDIQKALLV LHEQFGLSLKN
Specific function: Catalyzes 2 nonconsecutive reactions in the common biosynthetic pathway leading from Asp to diaminopimelate and Lys, to Met, and to Thr and Ile. [C]
COG id: COG0527
COG function: function code E; Aspartokinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartokinase family [H]
Homologues:
Organism=Escherichia coli, GI1786183, Length=386, Percent_Identity=26.9430051813472, Blast_Score=118, Evalue=6e-28, Organism=Escherichia coli, GI1790455, Length=277, Percent_Identity=28.5198555956679, Blast_Score=96, Evalue=5e-21, Organism=Escherichia coli, GI1790376, Length=340, Percent_Identity=23.8235294117647, Blast_Score=87, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6320893, Length=364, Percent_Identity=25, Blast_Score=105, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001048 - InterPro: IPR005260 - InterPro: IPR001341 - InterPro: IPR018042 [H]
Pfam domain/function: PF00696 AA_kinase [H]
EC number: =2.7.2.4 [H]
Molecular weight: Translated: 45128; Mature: 44996
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: PS00324 ASPARTOKINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEDKIIVQKFGGSSLRTPDLRQQAVEHIKQLVQNDKKVLVVVSAIGRSPDPYATDTLIN CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHH LIKEENPDPDLRELDLAVSCGEVLSSALLASKLQAEGYKATALTGRQAGIITDKNFTDGS HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEECCCCCCCH IREIKTSIIQKLFNQNKIIVVAGFQGVTPNGEIITLGRGGSDTTATAFAGELGAQRVEIY HHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCHHEEEE SDVDGLMTVDPKMVPDARPIKVITFYEVLQMAREGVKVIHPKAVEYAMKNSIPIFIKNIN CCCCCEEEECCCCCCCCCCEEEEHHHHHHHHHHCCCEEECHHHHHHHHHCCCEEEEHHHH KYYQEIGTKITSYISDKEEEQSNKIITGIAHLPNITQVSLELAENTSQSVKVDIFNALAE HHHHHHHHHHHHHHCCCHHHHCCCEEEEHHHCCCCCEEEHHHHCCCCCCEEHHHHHHHHH QGISLDMITIYYNNITFTVKGEDTEKTIKLLNERGFGQINHLSGCAKITLFGTGMTGLPG CCCCEEEEEEEEECEEEEEECCCHHHHHHHHHHCCCCCCHHCCCEEEEEEEECCCCCCHH VMAKALRILNKEEIEVLQTTDSNITISCLIQGKDIQKALLVLHEQFGLSLKN HHHHHHHHHCHHHEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TEDKIIVQKFGGSSLRTPDLRQQAVEHIKQLVQNDKKVLVVVSAIGRSPDPYATDTLIN CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHH LIKEENPDPDLRELDLAVSCGEVLSSALLASKLQAEGYKATALTGRQAGIITDKNFTDGS HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEECCCCCCCH IREIKTSIIQKLFNQNKIIVVAGFQGVTPNGEIITLGRGGSDTTATAFAGELGAQRVEIY HHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCHHEEEE SDVDGLMTVDPKMVPDARPIKVITFYEVLQMAREGVKVIHPKAVEYAMKNSIPIFIKNIN CCCCCEEEECCCCCCCCCCEEEEHHHHHHHHHHCCCEEECHHHHHHHHHCCCEEEEHHHH KYYQEIGTKITSYISDKEEEQSNKIITGIAHLPNITQVSLELAENTSQSVKVDIFNALAE HHHHHHHHHHHHHHCCCHHHHCCCEEEEHHHCCCCCEEEHHHHCCCCCCEEHHHHHHHHH QGISLDMITIYYNNITFTVKGEDTEKTIKLLNERGFGQINHLSGCAKITLFGTGMTGLPG CCCCEEEEEEEEECEEEEEECCCHHHHHHHHHHCCCCCCHHCCCEEEEEEEECCCCCCHH VMAKALRILNKEEIEVLQTTDSNITISCLIQGKDIQKALLVLHEQFGLSLKN HHHHHHHHHCHHHEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8098035; 9384377 [H]